Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 <---                                                                                                 ----  --------->ARR14(2)                                                                             <---  <---------ARR14(2)                                                   --------->YAB1   <---------AHL20(2) ------->CCA1(2)                                                  <-------TEIL          --------->AHL20(2) ------>ARR11(3)                          -------->P          --------->AHL20(1)      <----------DOF2 -------ARR11(3)              <---------ANAC58                <---------AHL20(1)      <-------------- >YAB1                    <---------GLK1(2) ------->GAMYB     <---------ARR11(3)      --------------- -->GT1         ------->TEIL  <---------ANAC58            --------->YAB1    <-----------GT1<---------YAB1   gatatatccgaatagttgaacctatatagattgtttgcataatcaaccctagaaacaaaatcaaaatattcattcatatttccttcttcttttattagta  8255900   --------->LBD16 <---------LBD16 ------>KAN4(2)                                --------->ANAC58 ------KAN4(1)                                 --------->ANAC58                                     - ----->KAN4(1)                       --------->TOE2(3)                                              - -------TaMYB80      --------->TOE2(3)     ------>ZmHOX2a(2)              ---------->DOF2         <-- -AGL15      <---------MYB52(1)   --------->ARR14(2)          ----------->GT1                    ---- >AGL15    <---------MYB46(3)     <---------ARR14(2)         --------->ALFIN1         <---------ZAT6<   tattccggtttagccgttgaatttcttaacttatggtatccttgatcgcatgcaaaaccaagagtggagaaacaaaaaaagagaagtagtattagttagt  8256000                                                                                       <---------DAG2                                                                                       <----------DOF2                                                                                      <--------------                                                                                      ---------------                                                   <---------RAP2.6(3)               ----------------                                                   ------>NtERF2                     <---------------                                                   <---------DDF1          <---------ZAT18  --------->SPL7                                  --------->DEAR3(1)       <---------ZAT14 -------->LBD16                                   --------->RAP2.6(2)      --------->ZAT14 ---------->HVH21                            ---------->DOF2               --------->ZAT18   <------- -------LBD16                              --------->MYB46(3)     <-----------HVH21  ---------------- ----->MYB52(1)                        --------->At4g35610  --------->ANAC58        <---------------- ---------SPL7          <---------TOE1(2)----------->RAV1(1)--------->ANAC58        <----------------   accggacgagttttctggctgagtcccatgttgaagaagacagcaacaaaagccgacatgaaacgccctgtcccgagtgctctaaatccctttttgggta  8256100                                                         --------->GLK1(2)                                           --------->ANAC58 -AGL15                   <---------TOE2(3)--------->ANAC58 >AGL15         <---------YAB1             --------->ANAC46 ->AG         <---------ICU4            <---------KAN4(2)--------->ARR11(3)                    ------ --AG         --------->YAB1           --------->YAB1    --------->ARR14(3)             ------->TEIL --ANAC46    --------->ICU4        --------->CCA1(2)     <---------ARR14(3)          <---------YAB1 < ->AGL1   <---------AHL20(2)     --------->YAB1          <---------ARR11(3)          <---------ANAC55(2) -AGL2    --------->AHL20(2)   <---------TOE2(3)<---------ALFIN1                  --------->ICU4    < -AG     --------->AHL20(2)   ---------->DOF2 ----------->RAV1(1)      <---------AHL20(2)   <--------   tacatcaacgatttaattatgtttgtttaagttaaagataagaataagcaacacatcaaaatcttgttcatattttatgacttaattatgtatgttacct  8256200                                        <---------WRKY12                                        <---------WRKY45                                      <-----------HVH21                                      <--------ZAP1                                 <---------MYB52(1)                              <---------------------WRI1                             <-----------------AGL1                           <------NtERF2<---------WRKY38(1)                           ----------->HVH21                           --------->ATERF1(1)  <------MYB46(1)         <---------RAP2.6(3)  <------MYB83            <-----------TGA1 --------->MYB59          ------>NtERF2--------->WRKY18(1) <---------TOE2(2)        <-----------HVH21 <---------TOE1(2)       <---------ATERF1(2) --------->MYB111(1)     --------->RAP2.6(2)         ------->MYC3       <----------DOF2 --->TOE2(3)             <---------ANAC58            <-------MYC3 <---------ZAT14 --------P               --------->bZIP60(1)       <XXXXXXXXXXXXXXXXXXXXMIR861-5P         <---------CCA1(2) ---------MYB55(1)       <---------bZIP60(1)    <------ZmHOX2a(1) --------->ZAT14------>ZmHOX2a(1) ---GT1                  <---------ANAC58---------->DOF2     ------------>CBF   --------->TOE2(3) ---   tggtaggtttctcatggataaacaatgccgtcaccgtttcggtcaaagaaggacacatgtttctccaatgcagtctttccttcctcaactgtttatcttc  8256300                                                                        --------->ANAC58              ------->GAMYB                   --------->TOE2(3)         --------->ANAC58  <---------MYB52(2)           <-----------GT1                    --------->YAB1       <----------ID1       <-----------GT1    ------------>CBF            --------->AtLEC2                ---------->DOF2    --------->ICU4 --->ZmHOX2a(1)            <-----------GT1 <----------DOF2   ----------->TBP      --------->TOE2(3)   ctacagaacaatataaccccaaaaatatgtttccatgcatagaccctttcttaatttcaacttataaaaagaacaagaaaactacattattaactaacat  8256400                                                                   --------->AHL20(2)                                                                  <---------AHL20(2)                                                              --------->AHL20(2)                                                            ----------->GT1                                                          ---------->DOF2                                                       ------>ZmHOX2a(1)                                                      --------->TOE1(3)                                                      --------->TOE2(3)                                                   <---------ARR14(2)                 <---------CCA1(2)                 --------->ARR14(2)          ---------->ID1                           --------->GLK1(2)       <------------CBF       <--        <-----------RAV1(1)                       <---------GLK1(2)--------->YAB1           <--------   ttcaacctatttgttgttcttatcttactaaatgtatagttgatgtgttacagaatccttaaaagtaaataatatcagattggagccatgttcaaattga  8256500                                                                                                    -                                                <-------GAMYB                                      --      <-----------GT1                          <---------MYB46(3)                                  <-   --------->YAB1                         <-----------RAV1(2)                                     --- <---------YAB1                   <---------DEAR3(1)                <---------YAB1               ---- -----TEIL                      <------ZmHOX2a(1)                <---------AHL20(2)            ------ ----CBF               <------ZmHOX2a(1)<----------DOF2          --------->AHL20(2)   <------ZmHOX2a(1)   ttcatgaataacctttggacttggaggaaacagaggaaggcgcttcaggctgttgagacatgagaaatttatcagagattggagtttaggagagattaca  8256600                                                                     --------->AHL20(1)                                                             ------>ZmHOX2a(2)                                                        <-------TEIL <---------AHL20(2)                                                       --------->CCA1(2)                                                      <---------GLK1(2)                    <---------ANAC58 -------->ZAT6                             <---------ANAC55(2)----------->GT1              <---------ANAC58 ------->ZAT14                            <-------TEIL--------->ARR14(2)                   <---------ANAC46 --------ZAT14                 --------->ZAT2         <---------ARR14(2)             <---------ANAC58 -------->RAV1(1)              --------->At4g35610    --------->ARR11(1)             <---------ANAC58 ----->ANAC46                  <---------At4g35610  ----------->ARR10--------->AHL20(2)<-------GAMYB --->ANAC46          <----------DOF2--------->ANAC55(2)--------->ARR14(1)            <---------ANAC46   caacactaaaattaacacataagctttcttatcagcttaggtgatacataaacaaagattcgatcggaaaataaaatgtggatagaggcgtttgtgtgtg  8256700                                            --------->ANAC58                                            --------->ANAC58                                            --------->ANAC46                  <---------ANAC58       --------->ARR14(2)                  <---------ANAC46       <---------ARR14(2)                  <---------ANAC58    <---------ANAC58                 <------ZmHOX2a(2)     <-------            ------->TEIL              <---------ANAC46               <------ZmHOX2a(1)      <--------     <----------DOF2                  <---------ANAC58           ---------->DOF2         <----------DOF2   tgtctctctttatgtatgtgtcttggacatgtcttctcatgcgtagacgcattccacatttcataccaaaaggatcagaaaatgtgagtctcttttacag  8256800  Previous    Next  AGI:  At1g23250.1    Description:  caleosin-related. similar to caleosin-related family protein [Arabidopsis thaliana] (TAIR:AT1G23240.3); similar to caleosin-related family protein [Arabidopsis thaliana] (TAIR:AT1G23240.1); similar to Os06g0254700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057304.1); similar to hypothetical protein OsI_021622 [Oryza sativa (indica cultivar-group)] (GB:EAZ00390.1); contains InterPro domain Caleosin related (InterPro:IPR007736) Range:  from: 8255222    to: 8256258    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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