Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ANAC58                                                                                          --------->ANAC58                                                                                        <---------AtLEC2                                                                                       <------NtERF2                                                                                      --------->LBD16                                                                                     --------->ANAC58                                                                                     <------NtERF2                               --------->ANAC55(2)                                   --------->ANAC58        --------->At4g35610    --------->ANAC58                                     <---------LBD16        <---------At4g35610    --------->ANAC46                                --------->SPL7        <---------ZAT2         --------->ANAC58                <------ZmHOX2a(1)--------->ANAC46        --------->ZAT2  <---------AHL20(1)            ----------------->AGL1  --------->MYB52(1)      <-----------RAV1(2)    <-----------GT1          <-----------------AGL1 <---------SPL7      <--- <-----------RAV1(1)    <---------ARR11(3)    <---------At4g35610          <---------At4g35610   ----   gacatgttgcagctgatttaaaactatatattcacgaaacagttttccatctgtcttccatttcaggacttcgattcagcctacggcccggcatggcact  8244000                         --------->TGA1a                         <---------TGA1a                         <---------O2                         --------->O2                         <---------ANAC55(2)                         --------->ANAC55(2)                         <---------ANAC55(1)                   <------ZmHOX2a(2)                         <---------ANAC58          ------>ZmHOX2a(1)        <---------ANAC58                         <---------ANAC58          ===================HOX2a_HOX2a                         --------->ANAC46     <---------ARR14(2)          <-----------GT1                    <-------TEIL             <------ZmHOX2a(1)--------->ARR14(2)                    -                 <---------MYB46(3)          --------->HSFB2a(1)    ---------->DOF2                --                <---------AtMYB61         ============================HOX2a_HOX2a                 ---              =====================bZIP_DOF  <---------HSFB2a(1)<----------ID1                   <---           --------->ANAC58               <------ZmHOX2a(1)   --------->AGP1<---------ANAC58     <---           --------->ANAC58----------->HVH21 =========================HOX2a_HOX2a                <--- ------ZAT14  <----------DOF2          <-----------RAV1(2)    <---------ARR14(2)                 <--- ----->ZAT14----------------------->TaNAC69(2)--------->ARR14(2)<---------ETT(2)               <-----   gcattgttggaacaagctttggttcatacgtgactcattccacaggaggattcctatattttcagatcgacaaagtttacgttcttctcttcaagactgc  8244100       <---------MYB52(1)      <-----------HVH21      <---------RAP2.6(3)    <------NtERF2  --------->TCP20 -------->REM1(2)                                                    --------->HSFB2a(2) ------->ALFIN1                                                   <----------DOF2 ------>LBD16                                                ------>ZmHOX2a(1)        <---------CCA1(2) ------ANAC58                                                <----------DOF2          ---------->ARF1 ------ANAC58                                           <-----------GT1           <---------ANAC58 ------bZIP60(2)                                       <---------AHL20(2)         <---------ANAC58 ------ANAC46                      <---------YAB1     --------->AHL20(2)          <---------ANAC46 ----ZAT14  <------ZmHOX2a(2) --------->TOE2(3)       <---------AHL20(2) <---------GLK1(1)   cgtggagccgttagatcaaaaatgagataaaacgttgatgatcagagcatcttcaatttaatccttttcttttagaattctctgtcttgtatcccacaat  8244200                               ------>ZmHOX2a(1)                           <---------PCF2                      <-----------RAV1(1)                                                 <---------AHL20(1)                    <----------DOF2                                                       --------->AHL20(1)                 --------->GLK1(2)                                                        <---------ARR11(3)                 --------->ARR11(3)       --------->YAB1     <---------ZAT6               --------->ARR11(3)                 <---------ARR11(3) ----------->GT1<---------At4g35610              --------->AtLEC2   gtaattctgcctaagacaaaatctttgtggctcctattgtgtaattagaagtcatcttctctactgtgaatcgtttcaacttcacaatgcaaaatattgt  8244300                                                                                              -------                                          <---------MYB46(3)                    <----------DOF2                             <-----------GT1                                 <---------ARR11(3)                <---------YAB1  <-------GAMYB      <---------MYB46(3)        --------->ARR11(3)    <----------DOF2     ---------->ID1 <-----------RAV1(1)               ---------->DOF2   --------->ARR14(2)   tcttctctttctcaaattctaattttgtttttttcgttgttgtgttgttgttgttgttgacattttcttctcttcaaaagagctttaaacccaaaacctc  8244400                                                                                                  ---                                                                                                 ----                             *TSS                                                                ----                          --------->ANAC58                                           --------->MYB46(3)                          --------->ANAC46                                      <------NtERF2    ----                    <-----------TBP                     ----------->GT1         --------->At4g35610               ------>ZmHOX2a(1)                   <---------ZAT14              <---------At4g35610         <-----------GT1  --------->ANAC58   --------->GLK1(2) --------->AHL20(2)<---------MYB52(2)  ------------>CBF <---------MYB52(1)   ---------->DOF2>>>>>>>>>TBF1     --------->WOX13(1)      ---- -->TOE2(3)   <---------ALFIN1  ---------->DOF2    --------->ZAT14     <------ZmHOX2a(2)  --------->At4g35610   taataccaattttgctcctccgttttataagcatcaaagaaaaaaagaatcagtgaagaagaaaaaaaaatggatcaatcgcagcgaacagtcgctgcaa  8244500                                    <-------MYC2                                    <-------PIF5                                    <-------MYC3                                    ------->PIF5                                    ------->MYC3     ------>ZmHOX2a(2)          <---------HSFB2a(2)    <------------OsbHLH66<----------DOF2         <-------GAMYB          --------->HSFB2a(2)   <---------At4g35610<---------ARR11(3)        <------MYB46(1) ---->GAMYB                  --------->MYB46(3)<-----------GT1               <------MYB83 ----->bZIP60(2)            --------->ANAC46 --------->ICU4                  <---------MYB46(3) ----->ANAC58   <---------SPL7  --------->ZAT2--------->ATHB51               ----------->GT1 ----->ANAC46  ------>ZmHOX2a(2)<---------ZAT2--------->YAB1                <---------AtMYB61 ----->ANAC58 --------------->AtSPL3------->MYC2   --------->ARR11(3)      <--------P   cgccatcgtcttctcgatcgtaccaattccacccagctcgtgctgcaattatcgatcttttcaatctctacttaggggttggttaatctcttctccaatc  8244600                                                                                                  ---                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR14(3)                                                                                           --------->ARR14(3)                                                                                           --------->ARR11(3)                                                                    ---------->DOF2        <---------ARR11(3)                                        <----------DOF2          <------NtERF2             <---------ARR14(2)                                       <---------ANAC58         <---------RAP2.6(3)        --------->ARR14(2)                                       <---------ANAC58        --------->RAP2.6(2)        <---------GLK1(1)     <---------AHL20(2)              <-----------GT1           ----------->GT1            --------->GLK1(1)    --------->AHL20(2)       <---------At4g35610              <-----------------------TaNAC69(2)-----    <---------AHL20(1)       --------->At4g35610          <------ZmHOX2a(1)             --------->LBD16    <---------AHL20(2)       <---------ZAT2    <-----------HVH21<-----------HVH21       --------->HSFB2a(2)   tcccaatttttttcatcgaattttgtttctctgctgattttgctttctctatcacagagaggaagccgtcaaaagcctgatgagtccctccgagatcccc  8244700                                                                       <---------WOX13(1)                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                     --------->ATHB12               < <-----------RAV1(1)                                                <---------YAB1                  < ------>LBD16      <---------YAB1                           <-----------GT1                         < ---->LBD16    <---------GLK1(2)                          <---------AHL20(2)        <------ZmHOX2a(1)   cgtatgttgtttctattgattctgaatcaactcttgttttctcttccttctgtgtttgattttatccatgttgattgttttgatcaggaacaaatcacag  8244800                                        --------->ANAC58                                        --------->ANAC58                                 --------->ANAC46                  <-----------HVH21              ------>ZmHOX2a(1)  --------->ANAC58             --------->At4g35610 ---------ANAC58                 --------->ANAC58             <---------ZAT2 ---------ANAC58           --------->MYB46(3)    <----------DOF2 --------->At4g35610 ---------ANAC46          -------->P--------->CCA1(2)         <---------At4g35610     ---------->DOF2   aagcgtgttcatgctcctaatagagacttaccaccaagaaacgagcaattccttttggattttgagctgcttcagagccaattcaatgtaaagtctcgtt  8244900  Previous    Next  AGI:  At1g23220.1    Description:  dynein light chain type 1 family protein. similar to dynein light chain, putative [Arabidopsis thaliana] (TAIR:AT5G20110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42340.1); contains InterPro domain Dynein light chain, type 1 and 2; (InterPro:IPR001372) Range:  from: 8242412    to: 8244392    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g23230.1    Description:  similar to hypothetical protein OsJ_007998 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24515.1); similar to hypothetical protein OsI_008648 [Oryza sativa (indica cultivar-group)] (GB:EAY87415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42343.1); contains domain SUBFAMILY NOT NAMED (PTHR12691:SF1); contains domain FAMILY NOT NAMED (PTHR12691) Range:  from: 8244429    to: 8251730    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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