Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->AHL20(2)                  <---------AHL20(2)      ----------->GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           ----------->GT1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     --------->ICU4          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        ----------->GT1          ---------->DOF2 --------->DAG2               <---------ATHB51      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     ---------->DOF2      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  ---------->DOF2--------->YAB1 --------->AHL20(2)--------->DAG2---------->DOF2--------->AHL20(2) --------->AHL20(2)        --------->AHL20(2)   xxxxxxxxxxxxxxxxxx>smallRNA(le3)             <------- <---------AHL20(2)    ----------->GT1  <---------ZAT14   --------->YAB1      <---------AHL20(2)  --- >GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <-----------GT1   aatttaaagagggtagaaataaaaatggataaaataaaagagtatagttgaaaaggggcatcataaaaaaggcattagaaataatttttcatgttttaaa  8239800          ---------->DOF2        <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)    --------->AHL20(2)    <---------ICU4                                                                            <------    --------->ATHB51                                                                          <------    <--------ATHB1                          --------->MYB46(3)                                -------    <---------AHL20(2)                      <---------MYB52(2)                --------->WOX13(1)   <-   <---------ATHB51                       --------->YAB1                <---------ANAC58  <---------AHL20(2)   <---------ATHB12             --------->YAB1--------->MYB52(1)        <---------ANAC58 <---------AHL20(2)   --------->ICU4            --------------->AGL15           <---------ZAT6 ------------>CBF  ------- --AHL20(2)                  <---------------AGL15         ----------->GT1 <-----------HVH21 <------- ------>YAB1         ---------->DOF2----------->GT1    --------->ZAT6 <------ZmHOX2a(1)  --------->AHL20(2)   tgacaataatttaaaagttaactaaaagagtctataatgggtaataacaaacgtataacactagtgaaaataggacttgtcaatccatgaattaaatatt  8239900         <-----------HVH21                             <------------CBF                    --------->ANAC46     --------->ARR14(1)                               -------->ATHB1                       --------->ANAC55(2)     --------->CCA1(2)                                <---------ICU4                       --------->ANAC58    <---------ARR14(2)           <---------MYB52(1)   --------->ATHB12                     --------->ANAC55(1)    --------->ARR14(2)  <---------ARR11(3)            --------->ATHB51                     <---------ANAC55(2)    --------->ARR11(1)  --------->ARR11(3)           <---------ATHB51           --------->TOE2(3) ---AHL20(1)          <---------AHL20(2)             --------->ICU4             --------->TOE1(3) ---ARR11(3)         --------->AHL20(2) ------>ZmHOX2a(1)                     <---------ARR11(3) -->ARR11(3)  <---------TOE1(2) <-----------TGA1     <---------AHL20(2)       --------->ARR11(3) --------AtLEC2 ----------->GT1 <-----------HVH21    --------->AHL20(2)       --------->GLK1(2)------ -->AHL20(1)<---------SPL7 <----------DOF2 ---------->DOF2            --------->GLK1(2)    ---------- --AHL20(2)<---------MYB46(3)  --------->ANAC46 --------->TOE2(3)     <---------ARR11(3)   --------->ANAC58   ttcatggatacggtcgtagggaaataaatctttccgtcagtcctaaaaagcctaaattattggatagacaaaaatctgaaaatcttaaatcacacgtaaa  8240000                                                    ------>NtERF2                                                   <---------ETT(2)                                                   <---------RAP2.6(2)                                                   <---------ANAC58                                                   ----------->HVH21                                                   <---------ANAC58                                                   --------->ETT(2)                                                  <------NtERF2                                                  --------->ATERF1(1)                                                <---------DEAR3(1)                                                --------->ALFIN1                                              --------->At4g35610                                              <---------At4g35610  <---------ANAC58                 <-------MYC3                 --------->ZAT2       <---------ANAC58              ----------->RAV1(1)           <-----------RAV1(2)<---------MYB46(3)         <---------At5g28300           <---------AHL20(2)   <------------CBF            <------ZmHOX2a(1)         <-----------GT1               --------->AHL20(2)  --------->ATHB12         ---------->DOF2     ------->TEIL------->MYC3         --------->AHL20(2) <---------MYB52(1)   <---------GLK1(2)    -- --->WOX13(1) <---------ALFIN1   <---------ATHB12<---------ATERF1(1)       <---------HSFB2a(2) ------ ->GT1  <-----------GT1      ------------>CBF <---------O2<-------TEIL     --------->HSFB2a(2) <-----   tcaaacgtatttacccccacatggaacttaatccaatctattaaattcaggtggcgaccgttcattggttcttgtctctagaatcccaaaggactcgttt  8240100                                                                          <----------DOF2                                                                          ------>ZmHOX2a(1)                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                      --------->GLK1(2)          ----                                                                      <---------ARR14(2)         ----                                                                    ---------->TaMYB80           ----           <-------TEIL                                          ----------->GT1          --------->ICU4      --------->AHL20(2)                     <---------ARR14(2)  <------NtERF2            <---------ARR14(2)      <---------AHL20(2)         --------->ANAC46               --------->LBD16      --------->LBD16     --------->YAB1       <---------------AtSPL8               <---------ANAC58      ------>NtERF2    ----------->TBP      ---------->DOF2     --------->ARR14(2)<---------ANAC58     <---------DEAR3(1) ------->LBD16    ------------>CBF          XXXXXXXXXXXXXXXXXXXX>MIR415  --------->TOE2(3)--------->ARR14(2) --->ARR14(2)     ------>ZmHOX2a(1)----------------->AGL3      <---------ANAC46    <---------LBD16 ----ARR14(2)    --------->TOE2(3) ----------------->AGL2     <---------LBD16 <---------YAB1 <-------   ccgagtataaaaatacgttcctcaattcaaagtacaaaccaaaaacagaaccgaaacagaaaatggcgggaaaatcctttatgactccggcgattatgct  8240200                                                                                                   --                                                                                                   <-                                                                                              -------                                                                                              ------>NtERF2                                                                                             <-------                                                                                            <--------                                                 ------>NtERF2                        <---------DOF5.7(2)                                                ----------->HVH21      ------>ZmHOX2a(1) ------->GAMYB                                       --------->ANAC58            --------->ARR14(2)<---------WRKY38(1) ----->ANAC58        --------->LBD16   --------->ANAC58    --------->LBD16           <---------WRKY12 ----->ANAC46      <---------LBD16 <-----------HVH21      --------->ANAC46          --------->WRKY18(1) ----->ANAC58    <-----------GT1  <---------DEAR3(2)     <---------LBD16           <-----------HVH21 --YAB1    ------>ZmHOX2a(1)  --------->ANAC46 --------->LBD16     <---------ARR14(2)<---------WRKY45   cgccatgcttctccttatttcaccggagacttacgccggtcacgactaccgcgacgctctccgcaagagcatcctcttcttcgaaggtcaacgctccggc  8240300                                                                 <---------ANAC46                                                                 <---------ANAC58                                                               --------->LBD16                                                               ------>NtERF2                                                              --------->RAP2.3(2)                                       ------>NtERF2          <---------ATERF1(2)                                       --------->LBD16        --------->ATERF1(2)                                ----------->HVH21             <---------DEAR3(1)                               --------->LBD16                --------->DEAR3(1)                               --------->At5g28300           <---------LBD16                              --------->TGA1a        --------->ARR14(2)                              <---------TGA1a        <---------ARR14(2)                              ===============================MYC_MYB                              --------->DEAR3(1)   --------->HSFC1(2)                              ======================bZIP_DOF --------->ORA47(2)                              <---------O2         <---------DEAR3(2)                              <---------ANAC58     --------->HSFB2a(1)                              --------->O2         <---------HSFC1(2)                              <---------ANAC58     <---------MYB46(3)                              <---------ANAC46    <---------DEAR3(1)                             <------NtERF2     ----------->HVH21 <---------ANAC58                           <---------PCF2 <---------SPL7    <---------ATERF1(1)                           <---------ANAC46  --------->ANAC58--------->ERF1                           --------->DEAR3(1)--------->ANAC46--------->RAP2.3(1)               --------->ANAC46<-----------HVH21------------>AtMYB77      --------->MYB52(1)            <---------WRKY12 --------->ATERF1(1)--------->MYB52(1) <------NtERF2           <------ZmHOX2a(2)------>NtERF2<----------DOF2    ------>NtERF2 <-----------GT1 ------->HSFC1(2)         --------->RAP2.3(1)--------->ANAC58--------->ATERF1(1) --------HSFC1(2)         --------->ATERF1(1)<---------ANAC55(2)<------NtERF2            --------->ANAC46 -->LBD16 <---------ARR11(3)<---------RAP2.3(1)--------->ANAC46<---------ATERF1(1) --------->ZAT18 --ETT(1) --------->AGP1--------->ALFIN1 <---------DAG2     --------->LBD16      <---------------AtSPL8 -LBD16   <-----------ARR10<---------DEAR3(1)--------->ANAC55(2)--------->ATERF1(1)<---------ZAT18   aaacttccaccagatcaacgccttaagtggcgccgtgactccgccttacgcgacggttcttccgccggcgtggatttaacgggagggtactacgacgctg  8240400                                              <-----------HVH21                                             <---------TGA2(1)                               <---------DOF5.7(2)                             --------->DOF5.7(2)                           <---------ANAC58  <---------bZIP60(1)                           <---------ANAC46  --------->bZIP60(1)                 <---------GLK1(1)           --------->TGA2(1)                 --------->GLK1(1)         --------->YAB1                               --------->ZAT2                --------->ARR14(2)        <---------ATHB12                       --------->TCP15(1)                <---------GLK1(2)--------->ANAC46                    --------->At5g28300<---------ZAT2                <---------ARR14(2)   ------>NtERF2                  ----------->GT1  --------->LBD16     --------->TOE2(3)     <---------ANAC58<---------ICU4       <---------GLK1(1)<---------PCF2     <    ----------->GT1 <---------HSFB2a(2)   --------->ICU4<-----------HVH21        --------->TCP20 ----   gagacaacgtaaaattcggattcccgatggcgttcacgacgacaatgatgtcatggagcgtcatagatttcggtaaaacaatgggaccggagcttgaaaa  8240500                                                                <----------DOF2                                                         --------->TGA1a                                                         --------->bZIP60(1)                                                         <---------TGA1a                                                         <---------bZIP60(1)                                                         <---------O2                                                         --------->O2                                                         ==================bZIP_DOF                                                       ------>NtERF2                                                      --------->ANAC46                                                      --------->LBD16                                                      ----------->HVH21                                                     --------->HSFB2a(2)                                                  <---------GLK1(1)                                                  --------->GLK1(1)                              <---                                                 <---------GLK1(2)                               ----    ---------->DOF2                  ---------->DOF2 <---------HSFB2a(2)                      -------  ----------->HVH21                  ==============================bZIP_DOF                  ======== --------->At5g28300      <---------GLK1(2)      --------->ARR14(2)                          <------ZmHOX2a(2) --------->LBD16     --------->MYB52(1)         --------->At4g35610           --------->ARR14(2)<---- ---------ANAC46    <---------SPL7 <---------YAB1<---------ARR14(2)           <---------ARR14(2)----- ----->ANAC46     <---------------AtSPL8        <---------At4g35610          <------NtERF2   <-------   cgccgtgaaagctatcaaatggggaacggattatctcatgaaagcgactcagattcccgacgtcgtctttgtccaagtcggagacgcttactccgatcat  8240600                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                             <-------                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->ATERF1(1)                                                                                           --------->DEAR4(2)                                                                                           --------->ERF1                                                                                           --------->RRTF1(1)                                                                                           --------->RAP2.6(1)                                                                                           --------->ORA47(2)                                                                                           --------->RAP2.3(1)                                                                                          <---------ATERF1(1)                                                                                         --------->ANAC46                                                                                         ------->GAMYB                                                                                         --------->DEAR3(1)                                                                                        --------->DEAR3(2)                                                                                        <------------AtMYB77                                                                                        --------->MYB46(3)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)         --------->ANAC58                                                         <------NtERF2------ ------ICU4       <------ZmHOX2a(1)                                              --------->LBD16----- ----->ATHB51  --------->LBD16          <---------MYB52(1)                      --------->DEAR3(1) -->YAB1--------->SPL7      --------->ANAC58                                   --------->ATERF1(1) ========================HOX2a_HOX2a  ----------->GT1                          <------NtERF2--------- -----YAB1    --------->LBD16       ------->TEIL      ---------->DOF2          <---------LBD16------- ---->ICU4   <------NtERF2  --------->ANAC46  <---------AHL20(2)             <---------DEAR3(1)------ --ATHB12--------->ANAC58   --------->ANAC58 --------->AHL20(2)             --------->ATERF1(1)------   aattgttgggaacgccccgaggacatggacacactacgaaccgtttataaaatcgataaagaccattctggttctgaagtcgccggagaaaccgccgccg  8240700  Previous    Next  AGI:  At1g23210.1    Description:  ATGH9B6 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B6); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 4 precursor [Arabidopsis Thaliana] (GB:O49296); similar to AtGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G70710.1); similar to unknown [Populus trichocarpa] (GB:ABK92482.1); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAB43937.1); similar to endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] (GB:AAQ15175.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Si Range:  from: 8240163    to: 8242118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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