Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------------->AtSPL3                                        <---------ARR14(2)              <---------At4g35610                                            <---------MYB52(1)     ---------->DOF2                                  --------->AtMYB61      --------->ARR14(2) --------->YAB1--------------->AtSPL8  <---------MYB52(1)            --------->ARR11(3)      -------- ---------YAB1--------->At4g35610  ------->TEIL   --------->MYB46(3) <---------ARR11(3)    -------->P >ANAC46    <------ZmHOX2a(1)   <---------ANAC55(2)  ----------------->AGL1 <-------GAMYB  <--------- -ALFIN1 <-----------RAV1(2)    --------->ANAC55(2)------->GAMYB ---------->DOF2          <----------   ccatcataagagcaggagctgtaccagtattgagacgtatcgttatgtctcaacgaccacaatgggagaaagctcttcggttactcagaaatttacccgt  8219500                                                                                              <------                                                                                           ----------                                                                                         ---------->DOF2                                                                                      --------->ANAC58                                                      <---------AHL20(2)          <----------TaMYB80                                                     --------->AHL20(2)<---------ANAC55(2)--------->DAG2                                                     --------->AHL20(1)<---------TGA1a--------->ANAC46                                                     <---------AHL20(2)--------->O2<---------ARR14(2)                                                     <---------AHL20(1)--------->TGA1a--------->ANAC58                        --------->AtLEC2          --------->AHL20(2)   <---------O2--------->ARR14(2)                        <---------ANAC55(2)       --------->YAB1       =============================bZIP_DOF ------->AGL15 <---------YAB1                  --------->YAB1      <-----------HVH21--------->CCA1(2) --GT1        <---------GLK1(2)             --------->YAB1    --------->ATHB12   ---------->TaMYB80 -GT1    <-----------GT1----------->GT1  --------->WOX13(1)  <---------YAB1      <---------KAN4(2)   ttaagacatttttacagattattgtcatgtaaaattttggaatcaattagaataatataatgtatgatttgtcatgtgagacgaatatacgaaaagttaa  8219600                   <---------ANAC58                   <---------ANAC46                   --------->ANAC55(2)          --------->GLK1(2)      <-----------GT1                                                   --       --------->ARR11(3)    ------->TEIL                                                          --       <---------ARR11(3) --------->ANAC58                                    <---------AHL20(2)   --     <---------YAB1<---------ANAC58<---------YAB1                            --------->AHL20(2)<-----     <---------TOE2(3)    --------->ANAC58                                --------->AHL20(2)   ------ --------->TOE2(3) <---------ANAC55(2) <-----------GT1             --------->WOX13(1)          ------ ---AHL20(2) ----------------------->TaNAC69(2)  <---------HSFB2a(2)  --------->AHL20(2)       ------ ->GT1--------->YAB1      <---------ANAC55(2)    --------->HSFB2a(2) <---------ATHB12          ------   ttacattaagataatcggattacgtagcacgtatattactattaccatattctagagattacacatgatcaatcaaatatttaatctttgaaatgttacg  8219700          ------->TEIL    --------->ICU4 ------->ANAC58 ------->ANAC46                             --------->ARR11(3)                        <---------ZAT18 ------->ANAC58                             <---------GLK1(2)                         --------->ZAT14 ----ANAC55(2)                              <---------ARR11(3)                        <---------ZAT14 --->ANAC55(2)                            ----------->ARR10                           --------->ZAT18 --->ANAC58      --------->GLK1(2)    --------->At4g35610                         >>>>>>>ZML2 --->ANAC46  <---------AHL20(2)     --------->MYB46(3)                       <---------HSFB2a(1) --->ANAC58 --------->AHL20(2)    --------->MYB52(1)     <-----------HVH21   --------->HSFB2a(1)   caagcaaaaatgaatttaaaatctgaaaatacaatccaacggctgagattttcttactgtgtcagtgaaaacgagagaaacgttctagttcactcacttg  8219800        <---------ANAC58        <---------ANAC46        <---------ANAC58    <-------MYC2                                                                --------->YAB1    -------->ABF1                                                               <---------ICU4    <-------MYC3                                                               <---------YAB1    ------->MYC3                                                             --------->YAB1    ------->MYC2                                     --------->AHL20(2)     <---------YAB1    ------->MYC4                   <---------GLK1(2) <---------AHL20(2)    <-----------GT1    <-------MYC4                  <---------HSFC1(2)--------->AHL20(2)    --------->YAB1   <---------O2                   --------->HSFC1(2)<---------AHL20(2) <----------DOF2   <---------TGA1a               --------->ANAC58   --------->AHL20(1)<---------ANAC58   --------->TGA1a           --------->ANAC58 <---------ANAC46        <---------ANAC46   --------->ANAC46          --------->ANAC58 <---------ANAC55(2) <---------ANAC58   ================================bZIP_DOF   <---------ANAC58    <---------ANAC46   --------->O2 ------>ZmHOX2a(2)--------->ANAC58   <---------AHL20(1)<---------ANAC58   --------->ANAC55(2)       --------->ANAC46 --------->ANAC55(2) <---------ANAC58   ================================bZIP_DOF   <---------ANAC58--------->At4g35610   <---------ANAC55(2)  <----------DOF2  <----------DOF2  *TSS<---------At4g35610   gttacacgtgtcttgggatcgtttagcttttaagcaagcttctcttttgcgtaatttatttaagagctgcttgcttttatcatcatcactctctctgcgt  8219900                                                      <---------ARR11(1)                      ---------->DOF2                 --------->ARR14(2)                    --------->HSFB2a(2)               <---------ARR14(2)               <---------ARR14(2)                    <---------HSFB2a(2)              <---------ARR14(1)      --------->ANAC58              ---------->ID1             <---------TOE2(3)                   --------->ANAC58          <----------DOF2                <---------TOE1(3)XXXXXXXXXXXXXXXXXXXX>MIR776  <---------ARR11(3)         ------>ZmHOX2a(2)   --------->GLK1(2)----------------------->TaNAC69(2)       --------->ARR14(2)       <---------ARR11(3)    <---------ARR14(2)      <---------CCA1(2)--------->ATHB12<------ZmHOX2a(1)       --------->ARR11(3)    --------->ARR14(2) <-----------GT1   ------>ZmHOX2a(1)<---------LBD16   ccaaattttgatctttgttcttctcaaagcgaatatggttttcaaggtttctaccgtatccacatctcctattgatggccagaaaccaggaacttctggt  8220000                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                      <---------AGP1                        <---------ANAC58                              <---------ARR14(2)                      <------ZmHOX2a(2)                               --------->ARR11(3)                   ------>ZmHOX2a(2)                                  --------->AGP1               --------->WRKY12                                      <---------CCA1(2)               --------->WRKY38(1)                                  ----------->ARR10    <---------ANAC58             <-------GAMYB                                        <------ZmHOX2a(2)  <---------ANAC58            <---------MYB46(3)                                --------->HSFB2a(2)    <---------ANAC58            --------->MYB52(2)                              --------->At4g35610 <---------ARR11(3)           <-------TEIL <---------ANAC58  --------->ANAC58  <---------At4g35610 --------->ARR11(3)        --------->HSFC1(2)                --------->ANAC46  ----------->RAV1(2) <---------GLK1(2)        <---------HSFC1(2)                --------->ANAC58 ------->TEIL<------ZmHOX2a(2) <---------ANAC46        --------->HSFB2a(1)    <---------At4g35610   ===================RAV   ----------->ARR10        <---------HSFB2a(1)    --------->At4g35610   <-----------RAV1(1)------>ZmHOX2a(2)<---------ANAC58   cttcgtaagaaggttcgttgatcgatccttgtcttctgaatcaaacgaaatcgaattgttgcatctggatcagatctgtttagattttcttgagtgtgat  8220100                                                              --------->YAB1                  <------                                                             --------->ICU4              <---------MYB52(1)                       ----------->ARR10           --------->ATHB12        <---------AHL20(2) -------           <-----------GT1                        --------->ICU4          --------->AHL20(2)  <------           <---------WRKY18(1)                  --------->YAB1<---------ICU4     <---------ANAC58         <---------WOX13(1)     ------>ZmHOX2a(2) <---------YAB1<---------YAB1   <---------ANAC58   tttgaagtgagattgaccatctgattagatttgatctatgcattaatctatattgattagtgaatgatgacaaattttaaatttcgttttcgttatttta  8220200                           <---------YAB1                          --------->AHL20(1)                          <---------AHL20(2)                          <---------AHL20(1)                         --------->AHL20(2)                         --------->YAB1               <---------HSFC1(2)                        <----                  <---------ANAC55(2)                 <---------HSFB2a(1)                       <----           --------->HSFB2a(2)                        --------->HSFB2a(1)                       <----           <---------HSFB2a(2) <---------AHL20(2)    --------->ANAC58                           <----   <------ZmHOX2a(2)    <---------YAB1               --------->ANAC58                           <---- ---AHL20(1)   <------ZmHOX2a(2)         --------->ARR14(2)     <---------ANAC46                ----- -->AHL20(2)  <---------ARR11(3)         <---------ARR14(2)    --------->ALFIN1     --------->ARR11(3) ---AHL20(2)  --------->ARR11(3)      <---------ANAC46--------->HSFC1(2)  --------->ATHB12    <------   tttggatcaagttcgagatcacgtttattatatttgatttgagtatatgtttgggacgcttctatgtggtgaatgttgatttgatagagcttgaaattac  8220300                                                                                                  <--                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR11(3)                                                                                       <---------ARR14(2)           <---------REM1(1)                                                           --------->ARR14(2)         <------MYB83                                                                  --------->ARR11(3)        <---------AtMYB61                                                              <---------GLK1(2)        <---------MYB46(3)                                                             --------->AGP1 -----ANAC46                                                                           <-----------ARR10 -----ANAC58                                                                           <---------ARR14(3) -----ANAC58                                                                           --------->ARR14(3) -----ANAC55(1)                                   --------->ATHB51                    <---------At4g35610 -----ANAC55(2)                                  <---------AHL20(2)                   <---------CCA1(2) ---->ANAC55(2)                                  <---------YAB1              <---------YAB1       <-- -----GT1<------MYB46(1)                     <---------ANAC46    ----------->ARR10<-----------HVH21<-   gttttttgagttggtgtagcgaaatggagactatatggattgaatttgtgtataattgaaactagggaagagcctagttgttattgtcagatcttcgttt  8220400  Previous    Next  AGI:  At1g23180.1    Description:  armadillo/beta-catenin repeat family protein. similar to armadillo/beta-catenin repeat family protein / F-box family protein [Arabidopsis thaliana] (TAIR:AT2G44900.1); similar to Os01g0524700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043222.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42318.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 8215710    to: 8219573    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g23190.1    Description:  phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative. Identical to Probable phosphoglucomutase, cytoplasmic 1 [Arabidopsis Thaliana] (GB:O49299;GB:Q9LR42); similar to PGM (PHOSPHOGLUCOMUTASE) [Arabidopsis thaliana] (TAIR:AT5G51820.1); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70730.1); similar to Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM) (GB:Q9ZSQ4); similar to unnamed protein product [Vitis vinifera] (GB:CAO42326.1); similar to Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM) (GB:Q9SM60); contains InterPro do Range:  from: 8219858    to: 8224458    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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