Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------GLK1(2)                                      --------->ANAC58                    ------>ZmHOX2a(2)            <-------TEIL              --------->ANAC58                  --------->ARR11(3)        ---      ---------->DOF2           <-----------HVH21   <---------------------WRI1                   <---  --------->ANAC58   <---------GLK1(2)--------->ANAC46                  <---------ARR11(3)      <----  --------->ANAC58   <---------ARR14(2)    <------NtERF2        --------->ANAC58               ------ --------->DOF2      --------->ARR14(2)    --------->At4g35610  --------->ANAC58             <-------   tacaaagcaaaagcttcatagcagtttctcaaaatgtcacaaggcagcgagaatttcgaattggacaaggaaatgatctaaacaaaacaaaaccagatta  8175400                                     --------->CCA1(2)                               --------->LBD16  <---------ANAC58            <------NtERF2                              --------->HSFB2a(2)                          ------>NtERF2 ------>ATHB51                <---------HSFB2a(2)               ----------------->AGL1 ------YAB1                  <---------LBD16    <---------ANAC58<-----------------AGL1 -----AHL20(2)       --------->YAB1 <---------ARR11(3)      <-------GAMYB  ----------->RAV1(1) --->YAB1           <-------TEIL    --------->ARR11(3)      --------->At4g35610 --GLK1(2)        <---------GLK1(2) <---------ARR14(2)      <---------At4g35610       --------->MYB52(1)   taattgaaaatataagaacagattcataaactccggaagatatagaagaggcttaccgattcagttgcataaactggcaccataaacaaaacagaaacaa  8175500                                                                                                   <-                                                                                              <------                                                                                          --------->ARR14(1)                                                                                          --------->GLK1(2)                                                            ----------->GT1              --------->ARR14(2)                                                    <-------TEIL                         <---------GLK1(2)                   <---------YAB1                  --------->CCA1(2)                     <---------ARR14(2)                 --------->YAB1                <---------------------WRI1               <---------GLK1(1)           ------>ZmHOX2a(1)                 <---------ANAC55(2)                       ----------->ARR10       ---------->ID1                        --------->ANAC46               ---------->DOF2<-------TEIL   tccatttttgttcctaaaattatacttaaactcattaagcatcgaacacgtagatacatacaatgtaaattgaagaaaaaaagagaatggagattcgttt  8175600                                                                                    =================                                                                                    =================                                                                                   --------->TOE1(2)                                                                                 <------ZmHOX2a(2)               <------MYB83                                                     --------->ARR14(2)               <------MYB46(1)                                                  <---------ARR14(2)           <------ZmHOX2a(1)                                                    --------->ARR11(3)           --------->ATHB12                                                     <---------ARR11(3)       <---------At4g35610                                                     <------ZmHOX2a(1)       --------->At4g35610                                                    <---------HSFC1(2)    --------->SPL7                                                            --------->HSFC1(2)    <-------TEIL                                                              --------->HSFB2a(1)    ---------->DOF2                                                           <---------HSFB2a(1) <---------ANAC55(2)                           ---------->DOF2            <---------ANAC46 <---------ANAC46             <---------ARR11(3)                         <------NtERF2        ------- --------->ANAC55(2)   --------->MYB52(1)   <---------ZAT6              ------>NtERF2       <-------- <---------ANAC58<---------ANAC46       <---------ARR14(2)             --------->ALFIN1<---------At4g35610 <---------ANAC58<---------REM1(1)     <------ZmHOX2a(1)               <---------DEAR3(1) --------->YAB1 ----------GT1<---------AtMYB61<-----------RAV1(1)                --------->MYB52(1)------>ZmHOX2a(1) ---MYB52(1)--------->ARR14(2)--------->ARR11(3)       <----------ID1------->GAMYB------>ZmHOX2a(2) -   tttacgtacagcaggattggtgtagaaacggagatgttggaggatagagtaaagggagagacaaatggcaacggtggcgaaggatcctccgatgatcaaa  8175700                        <---------ANAC58                        <---------ANAC58                       ------->TEIL                   --------------->AtSPL3                   ------->TEIL             ------>ZmHOX2a(2)            <<<<<<<<<GATA-1            <<<<<<<<<GATA-4            <<<<<<<<<GATA-3            <---------GLK1(1)            <------ZmHOX2a(2)            <<<<<<<<<GATA-2           <---------AGP1           <---------ARR14(2)           --------->ARR11(3)           --------->ARR14(2)     <---------MYB52(1) --------->At5g28300--------->ANAC55(2) ==================HOX2a_HOX2a    <<<<<<<<<MYB98                                             -------- ===================HOX2a_HOX2a  <-----------HVH21                                          <-------- --->DOF2  <---------ARR11(3)    <-------GAMYB                                          --------->TOE2(3) -YAB1    <---------CCA1(2)     --------->ANAC46                   <---------AHL20(2)----------->RAV1(1) ---------->GT1--------------->AtSPL8            --------->HSFB2a(2)           <------ZmHOX2a(2)   <-   gacggtaaatgtagatctctgtacgtacttgtctccgttactcccattcttccaaaattttagacatattttttgatatagatcagacaacattatcatt  8175800                                                                      --------->At4g35610                                                                      <---------At4g35610                                                             <-------MYC2                                                             <-------MYC3                                                             ------->MYC3                                                             ------->MYC2                                                             ------->PIF5                                                             ------->MYC4                                                             <-------MYC4                                                             <-------PIF5                                                            ==================bZIP_DOF                                                            >>>>>>>>>>HY5                                                            --------->PIF3(3)                                                            <---------PIF3(3)             <---------ANAC58                       ===============================================bZIP_DOF            <---------ANAC58                       <----------DOF2                      <---------TGA1a               <---------ANAC46                      <---------ANAC58                      --------->ANAC46 <---------At4g35610                      <---------ANAC58                      ===================================MYC_MYB                    <-----------GT1          <---------TOE1(3)     ---------->DOF2------------>AtMYB77              <----------DOF2                <---------TOE2(3)     ==================================           <-----------GT1               <----------DOF2    --------->O2 --------->MYB52(1)       <--        *TSS---------->ID1               =============================bZIP_DOF    =================== ->YAB1<------------------------ANAC81 <---------MYB46(3)   <---------O2----------->HVH21------------ -YAB1<---------MYB52(1)       ------------>CBF             --------->TGA1a  --------->At4g35610 ---- -----------------------ANAC81--------->TOE2(3)         <----------------PIF3(2)  ----------->RAV1(1)   ttgtttctgtttttttctttttttgctttctatctcaatggtggtttaaggttgtaatgtccacgtggctaaagctgacagatgccacagttgcgttctc  8175900              --------->RAP2.3(3)              <---------ATERF1(2)              --------->DEAR3(1)             --------->ATERF1(1)             --------->ERF1             --------->ORA47(2)             --------->DEAR4(2)             --------->RAP2.3(1)            <---------ATERF1(1)           --------->ANAC46   <-------MYC2   <-------MYC4   ------->MYC2   ------->MYC4   ------->MYC3 <------NtERF2   <-------MYC3--------->ABI4(1)  --------->O2--------->ANAC46  --------->TGA1a  <---------O2--------->RAP2.3(2)  <--------ABF1<---------ATERF1(1)  <---------TGA1a  --------->ANAC55(2)   <---------ARR11(3)                                        --------->ARR11(3)  <---------ANAC55(2)   --------->ARR11(3)                                   --------->AHL20(2) ===========bZIP_DOF    <---------AHL20(1)                              <---------AHL20(2) ---------HVH21------>NtERF2                                            --------->AHL20(2)         -- ===========MYC_MYB   <---------TOE2(3)    --------->At5g28300         --------->YAB1            <--- ----------->TaNAC69(2) --------->AHL20(1)----------->GT1              --------->AHL20(2)  --------->AHL20(2) ------->HVH21--------->RAP2.6(2)     ----------->HVH21            <------ZmHOX2a(1)       <---------AHL20(2)   tgacacgtgtttctcgccgcctctaagatattgatactaggtgactgtaaaatagacaaaattggtagaggaattaaaatgaaataacttgaaataaata  8176000            --------->DAG2           ---------->DOF2                          <---------ETT(2)      ---------->DOF2                   --------->ARR14(2)     <------NtERF2                      <---------ARR14(2)                                 ----------  <---------PCF2                    --------->At4g35610    --------->ZAT6               ---------->DOF2 ----------->TCP11(1)             --------->DAG2    --------->ETT(2)                  --------->ANAC58 ------->ALFIN1                  ---------->DOF2   --------->DDF1                  <-----------------AGL1 --------RAV1(1)           <---------ZAT14   <-----------HVH21         --------->YAB1 --------->ANAC58   tgtgggccgaaagaaaagtagactcagtgtatagagaaagcggaattggtcatgtcgactatctctaatgcaagaatattagaagaccaagaaaggcaaa  8176100                                                           --------->YAB1                  --------->CCA1(2)                       <---------YAB1                 <---------ARR14(2)                     --------->YAB1                 --------->ARR11(1)                     <---------------AGL15                 <---------ARR11(3)                     --------------->AGL15                 --------->ARR11(3)                     --------->TOE2(3)                 --------->ARR14(2)                    ----------------->AGL3               ----------->ARR10---------->DOF2        ----------------->AGL2           --------->YAB1  --------------->AGL15   --------->YAB1       <---------AHL20(2)  =============================================MADS_MADS --------->ICU4 ->GT1 --------->AHL20(2)  <---------------AGL15 <---------ARR11(3)   <-------GAMYB    <---------AHL20(2)   ttagagaaatttatcagaagatttggggtcttaaaaaagaaatagaaccaaaatcataccataataagttgtcgttgttgtgtcattagttatttgggtt  8176200         --------->ANAC55(2)         <---------ANAC58         <---------ANAC58         <---------ANAC55(2)                                         --------->YAB1        --------->SPL7                                   <---------ANAC55(2)        <-------TEIL                                     <---------ANAC58        ------->TEIL                                     <---------ANAC46      <---------SPL7                                     --------->ANAC55(2)     <---------ANAC58                                    <---------ANAC58    --------->TOE2(3)     <---------ANAC58                                    <---------ANAC55(1) <----------DOF2    <---------------AtSPL3                 ---------->DOF2          <---------ATHB12    --------------->AtSPL3              <----------DOF2<-----------GT1       --------->TOE1(3)  ------->TEIL                  ------->TEIL --------->ICU4       --------->WOX13(1)   --------->ALFIN1   tatgtatgcgtacgtgtctaagttgtctatgatgtatgtattctttaaagattagttttacgtgttatctatcatggagccttaatggattggggagaag  8176300  Previous    Next  AGI:  At1g23070.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G38360.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO65220.1); contains InterPro domain Protein of unknown function DUF300 (InterPro:IPR005178) Range:  from: 8173812    to: 8175808    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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