Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->AHL20(2)                                                                     <----         --------->YAB1                                                                     ---------      --------->YAB1                                                               <---------PCF5     --------->AHL20(2)                                     <---------ICU4 <---------YAB1   ---------     <---------AHL20(2)       <-----------GT1           <---------YAB1----------->GT1      <---------YAB1   --------->TOE2(3)       <---------ARR11(3)    --------->YAB1     <-------TEIL  <---------ZAT18 -At4g35610          <-----------GT1       ----------->RAV1(1) --------->AHL20(2) --------->ZAT18   gaaaacattaattatacacattttttcaagataaaccatttagtacaacaaatatagtatgaaaattacatacagttatattagtggaccactataatat  8164500                                                         --------->ALFIN1                                                       ------->GAMYB            <---------ICU4                                                    --------->MYB52(1)          -------->HAHB4                                                <---------ZAT18                 <--------ATHB1                                                --------->ZAT18                <---------YAB1                                               <---------ANAC46                <---------ATHB12                    <---------TOE2(3)        <---------ANAC46                  --------->ICU4                  <---------AHL20(2)        --------->ALFIN1                  <---------TOE2(3)     -                 <---------AHL20(2)         <---------AtMYB61   --------->AHL20(2)       --------->ANAC46 -------GT1      --------->AHL20(2)    <-----------RAV1(1)      <---------AHL20(2)     --------->ANAC46 >YAB1   ----------->GT1            <----------DOF2<---------WRKY12         <---------AHL20(2)     -- >AHL20(2)    --------->AHL20(2)   <---------DAG2  <---------WRKY38(1)      --------->AHL20(2) ------   acctctaaaacatgtataaattaatgtatagtttaagccttttgttgtggtggacaacggtgggattttaatcgctaattaatgattctacacaaaaaaa  8164600                                                      ----------->GT1                                                  ------>MYB46(1)                                                  ------>MYB83                                                 --------->MYB55(1)                                                <---------MYB111(2)                                                <---------MYB46(2)                                                <---------MYB55(2)                                                <---------MYB111(1)                 ------>NtERF2                                                --------->AtMYB61                  ----------->HVH21                                                <---------MYB59                    --------->DEAR3(1)                                                <---------MYB52(2)              ----------->HVH21            <---------------------WRI1         --------->ANAC46                 --------->DEAR3(1)        --------->MYB52(1)                   <---------ALFIN1               --------->WRKY12       <---------AHL20(2)                   --------->MYB46(3)              --------->WRKY38(1)      --------->AHL20(2)                    ------>ZmHOX2a(2)               --------->ZAT14   <---------AHL20(2)                      <------ZmHOX2a(2)                <---------ZAT14     <----   --------->AHL20(2)                     --------->ARR14(2)           <---------ATHB12    <---------ZAT14 -------->AHL20(2)                        <---------TCP20            --------->WOX13(1)    --------->ZAT14 ------->AHL20(2)                         <---------ARR14(2)    <----------ID1 --------->DEAR3(2)   - --->AHL20(2)----------->GT1             --------->GLK1(1)--------->AHL20(2)--------->ZAT18--------->ZAT18   aataaaaaattaatggcgataaaaaccaaaatagttcatgaggggatccacctaacatgaaaaaatacgaccaattagtggaccgacgacgagtacagtg  8164700                                <---------ANAC58        -------->P             <---------TOE2(3)       <-----------GT1--------->AHL20(2)                              <---------ANAC58     <---------MYB46(2)  <---------YAB1                         <---------YAB1             --------->At4g35610     <---------MYB52(2)<-----------GT1         <---------ARR14(2)     <---------ANAC58     --------->HSFC1(2) ------>ZmHOX2a(1)    <---------AHL20(2)    <---------ZAT6<---------AHL20(2)  <---------AHL20(2)----- -----ZAT18       ------>ZmHOX2a(1)<-------TEIL<---------ZAT14--------->YAB1  --------->AHL20(2)<---- -------->TOE2(3)<---------MYB59<---------ANAC58   <----------DOF2    <---------ANAC46     <---------HSFC1(2)   ctccttaactaaccttcttcctaatttatcatttacgttcagactagtgtatacttttatttaagtataatttcgtttaaaaaaatgactagaagcttac  8164800                                                                        --------->ANAC58                                                             --------->ANAC55(1)                                                             --------->ANAC58                                                             --------->ANAC55(2)                                                             <---------ANAC58                                                             <---------ANAC55(2) <---------ICU4                            --------->AHL20(2)               --------->ANAC46    --------->YAB1              --------->ANAC46                               <---------ANAC58 --------->YAB1     ----------->GT1        <---------AHL20(2)               --------->ANAC58<-------TEIL ---->HSFB2a(2)            --------->AHL20(2)      ------->TEIL         --------->ANAC58  ----------- -----HSFB2a(2) --------->ANAC46                --------->AtLEC2--------->MYB52(1)  <---------ALFIN1   agaaaaattgttatatacacaatacactatttaataagtctatgactcccatgcacttgacttacgtaacgagaacgcattcatcatcacctctcaattc  8164900    --------->ANAC58    --------->ANAC55(2)    --------->ANAC46    --------->ANAC58    ==================================bZIP_DOF  *TSS    <---------O2                         --------->ARR14(2)    --------->O2                        ----------->TBP    --------->TGA1a             <---------At4g35610    <---------TGA1a        <----------DOF2    --------->ANAC46              --------->YAB1      -----  <-----------GT1  <-----------GT1    --------------->AGL15           <----------DOF2          <----- ->CBF     ------>ZmHOX2a(1)    --------->At4g35610              <-----------GT1            ---------   attttcacgtctcctcttaattttcaactctttaagctcaccatatatacaaaactctgtttttgattttctctttgatcaaaatcaaaaaacgccgatc  8165000                                            --------->TGA2(2)                                           <-----------HVH21                                           <-----------TGA1                                          --------->bZIP60(1)                                          <---------bZIP60(1)                                          --------->bZIP60(2)                                          <---------TGA2(1)                                          --------->ANAC58                                          --------->ANAC58                                          --------->ANAC46                                          --------->TGA1a                                          --------->TGA2(1)                                          <---------TGA1a                                          <---------O2                                         <-----------STF1                                       ----------->HVH21                                      ------>ZmHOX2a(2)                                      --------->DEAR3(2)                              <---------ALFIN1                                     <------ZmHOX2a(2)                       <---------ANAC58                                    --------->ARR14(2)                       --------->TGA1a                                    <---------ARR14(2)                       <---------O2                                   --------->GLK1(1)                         --------->O2                                   <---------GLK1(1)                         <---------ANAC46                                 <------NtERF2                               <---------TGA1a                                --------->LBD16                              <---------ANAC55(2)                           --------->MYB46(3)                                <---------bZIP60(2)                <------NtERF2   ------>NtERF2                                <---------ANAC58               --------->LBD16 <---------ANAC46                              <---------ANAC55(1)               ------>NtERF2   --------->DEAR3(1)                       --------->At4g35610              --------->LBD16--------->ABI4(1)                <---------YAB1 --------->ANAC55(2)      --------->ANAC46     --------->DEAR3(2)               --------->YAB1 <---------TGA2(2)   --------->ZAT18        <---------At5g28300              --------->ICU4 ----------->HVH21   ------- ---->YAB1    <---------LBD16------>NtERF2--------->O2     <---------YAB1 ----------->TGA1--------->YAB1 -ZmHOX2a(2)  <---------ANAC46<---------LBD16       <---------At5g28300 --------->ZAT2--------->ZAT6< >DEAR3(1)   <---------LBD16--------->DEAR3(1)     <-----------GT1------>ZmHOX2a(2) ----------->RAV1(1)   acaagttcacaacatgccgggaaattctcaccgccggggatccgacgtcatattcaccgtgatgatgatcgccttgctgacgtgtccaacactcatcaac  8165100                                                                                                    -                                                                      <---------ZAT2          <------               --------->HSFC1(2)                                     <---------At4g35610   ---------               <---------HSFC1(2)                                     --------->At4g35610   ------>NtERF2             <---------GLK1(2)--------->ANAC58               <---------ZAT18               --------->ANAC58       <---------ICU4         --------->ANAC58               <---------ZAT14               --------->ANAC46       --------->YAB1     --------->ANAC58                   --------->ZAT14               --------->DEAR3(1)      <---------YAB1      --------->ANAC46               --------->DAG2                    --------->ANAC58    <---------ICU4        --------->ANAC58              ---------->DOF2  <-------TEIL     <---------LBD16    --------->YAB1  <----------DOF2               <------ZmHOX2a(2)   --------->ZAT2     ------>ZmHOX2a(1) -->MYB52(1)--------->At4g35610            <---------AtMYB61 --------->ZAT18             <---------ATERF1(1) -------TEIL<---------At4g35610 ---------->DOF2  <---------ARR14(2)  --------->ANAC46   <---------ALFIN1   ggttcatcatcatcagatgcttctttagaagcaagaaagctcgatgaggtcgatcccataaagtgctctccaagctgcatccaaaaccctcctccgccat  8165200                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                     <---------ALFIN1                                                             ---                     --------->AtMYB61                                                           ----                     --------->DEAR3(1)                                                          <---                    --------->MYB46(3)                                                          -----                  <---------ALFIN1                                                              -----                --------->LBD16                              ------>NtERF2                     ------                ------>NtERF2                          <---------ATERF1(1)                    <------               --------->ANAC46                        --------->ABI4(1)                     <-------               --------->ANAC58                       --------->DEAR3(1)                     --------               --------->ANAC58              <---------ARR14(2)                            --------->ABI4(1)              <---------LBD16                --------->ARR14(2)                            ------>NtERF2             <---------ATERF1(1)           ------>NtERF2     --------->LBD16               <---------ATERF1(1)            --------->ARR14(2)           <---------LBD16    --------->DEAR3(1)            <---------ALFIN1            <---------ARR14(2)<---------ARR14(2)      --------->DREB2C(2)                 --------->DREB2C(2)      --------->AtMYB61 ------->PIF5     --------->LBD16   --------->ATERF1(1)            --------->DEAR3(1)      <---------ALFIN1 --------->ZAT2  <---------ALFIN1------>NtERF2                      ------->GAMYB      --------->DEAR3(1)<-------PIF5   --------->DEAR3(1)--------->DEAR3(1)              --------->MYB46(3)     <---------MYB55(2)----------->RAV1(2)--------->LBD16<---------ALFIN1                --------->DEAR4(2)     --------->MYB46(3)--------->At4g35610--------->ANAC46------>NtERF2                 <---------ATERF1(1)   --------->ANAC46<---------ATERF1(1)--------->ANAC46<---------ALFIN1                 <---------ALFIN1   <---------ALFIN1------>NtERF2  ------>ZmHOX2a(1)   ------->GAMYB                    --------->ANAC46 ------>ZmHOX2a(1)--------->DEAR3(1)<---------ALFIN1 --------->MYB46(3)               --------->MYB46(3) -------->ANAC46<---------ATERF1(1) --------->AtMYB61--------->ORA47(2)    <---------At4g35610------>NtERF2 ---ALFIN1<-----------HVH21   --------->ARR14(2)   <---------ALFIN1 ---------->DOF2 <---------ZAT18-- >LBD16  --------->DEAR3(1)<---------AtLEC2--------->LBD16<---------ATERF1(1)   ------>ZmHOX2a(1)----   ctcctccaccaccgtctccgccaccacctgcatgtcctccacccccggctcttccaccgcctccgcctaagaaagtcagttcctactgcccaccgcctcc  8165300                                                                              --------->DAG2                                                                             ---------->DOF2                                                                          <------NtERF2                                                                         --------->LBD16                                                                        --------->RAP2.3(2)                                                                        --------->RAP2.6(2)                                                                        --------->LBD16                                                                       <---------LBD16                                                                       <------NtERF2                                                                       --------->ATERF1(1)         <---------ANAC58                                              --------->RAP2.3(1)         <---------ANAC46                                             ------>NtERF2       --------->ARR11(3)                                             <------NtERF2       <---------AHL20(2)                                             <---------ATERF1(1) <------NtERF2                --------->LBD16                        <---------ATERF1(2) -------->LBD16               ------>NtERF2                          --------->RAP2.3(2) ----->NtERF2                --------->LBD16                         <---------DEAR3(1) --------ATERF1(2)           <---------ANAC46                        --------->ATERF1(2) ------->DEAR3(1)           <---------LBD16                          --------->DEAR3(1) ------->RAP2.3(2)         <------NtERF2                            --------->ATERF1(1) --------DEAR3(1)          ------>NtERF2                            --------->SPL7 ------->ATERF1(2)       --------->SPL7                             --------->ERF1 -------LBD16           <---------ATERF1(1)                         --------->RAP2.3(1) ------>ATERF1(1)       --------->TCP16(2)                         <---------ATERF1(1) ------>DEAR4(2)       <-----------HVH21                           ------>NtERF2 ------>ORA47(2)       --------->ARR14(2)                          --------->ATERF1(1) -->NtERF2             <---------ARR14(2)                          <---------DREB2C(1) ------ATERF1(1)       <---------TCP16(1)                          --------->DREB2C(1) ---->ANAC46           <---------PCF5                             <---------ATERF1(1) ---->DEAR3(1)      <---------ANAC55(2)                           <---------SPL7                 <--- --->ATERF1(1)      --------->ANAC55(2)   --------->ANAC46        --------->DEAR3(1)             ---- ---ATERF1(1)      <---------LBD16--------->GLK1(1)              --------->ATERF1(1)            <---- --ALFIN1<---------ANAC58--------->ATERF1(1)   <---------MYB52(1)<---------RAP2.6(2)        <-------- ->DEAR3(1)      ----------->HVH21<---------GLK1(1)             <---------ATERF1(1)       <---------MYB46(3) ------->RAP2.3(3)--------->MYB52(1)     -------->P             --------->At4g35610      --------->ALFIN1 ----->LBD16   --------->ANAC46<------NtERF2  <-------GAMYB     <---------At4g35610   <-----------RAV1(1)   gccggctaatttcttgtacatcacgggtccgccgggaaatctctaccccgttgatgagcaattcggagcggccgccggaaaaagttttatggtggtgaag  8165400  Previous    Next  AGI:  At1g23040.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT1G70990.1); contains InterPro domain Glutelin; (InterPro:IPR000480) Range:  from: 8164948    to: 8165851    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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