Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                   ------->TEIL                                                              --------              <------ZmHOX2a(1)                                                              <-------     <---------At4g35610                                                                     --------     --------->At4g35610                                                                     --------     ----------->GT1                                                                         --------    --------->ANAC58                                             --------->ZAT6              --------    --------->ANAC58 --------->YAB1        <---------YAB1        <-----------GT1           <--------- -----YAB1---------->DOF2     --------->MYB59             <----------DOF2       ---------------------   cattgtaagctaaaaaggatgaatcatcgagttaggctctcatttgtcattaagcttcttctttgtttcactagtcattaagcgttgcacattatacgca  8146900     --------->AHL20(2)     <---------AHL20(2)   --------->TOE2(3) ---------DOF2 ->ANAC46 --ANAC55(2)                      ---------->DOF2 ->ANAC58                    <---------MYB52(1) ->ANAC58                   --------->LBD16    ----------->GT1 ->ANAC55(2)              <---------LBD16      --------->ALFIN1 ->ANAC55(1)            <---------ARR14(2)   <---------ANAC58                                    ---- --GT1<---------AHL20(2)--------->ARR14(2)   <---------ANAC58             ----------->GT1 --------->AHL20(2) -->TaNAC69(2)        ---------->DOF2    <---------ZAT14      ---------->DOF2          --------->AHL20(2)   actttcattaaatgcagacttcgataaatccggtactaaagactatagagtgtgacaaaaaaaaaaaagagtacaagagtgaaatctcataaaataatac  8147000                                                                                        <------------                                                                                        -------------                                                                                       --------------                                                                                       <---------ATHB12                                                                                       --------->MYB46(3)                                                                                       --------------                                                           ----------->GT1        --------->ANAC58                                                   --------->YAB1                 --------->AtLEC2                                                   <---------ICU4                 --------->ANAC58                                          --------->ZAT18---------->DOF2     --------->ANAC46                                         <-----------HVH21--------->DAG2   <---------ALFIN1                                     ---------->DOF2 <---------YAB1    --------->At4g35610 ------>DOF2                     ---------->DOF2  --------->ICU4       <---------At4g35610   --------   aaagacaaacaaaaattcccaaaacaaacaatttggaaagaaaggtcactgaataatgaaaaaggaaaatgccatctgcacatcatgcaaccattaaaag  8147100                                                                                        <-------MYC2              --------->TOE2(3)  --------->AHL20(1)                                     ------->MYC2       <-----------GT1           --------->AHL20(2)                                     <-------MYC3 --------->AHL20(2)              <---------AHL20(1)                                     ------->MYC3 --------->AHL20(1)      --------->ATHB12                                            ------->GAMYB <---------AHL20(2)    <---------TOE2(3)                                    ---------->DOF2 ---AGL15   ------>MYB46(1)      <---------AHL20(2)                        --------->TOE1(2) -->AGL15   ------>MYB83<---------YAB1                              XXXXXXXXXXXXXXXXXXXX>MIR851-3P--- --->AGL2 <---------MYB59-------->HAHB4                ---------->DOF2    --------->MYB46(3)      <-- --->AGL3 <---------MYB46(2)    --------->AHL20(2)  --------->YAB1<---------ANAC58   <---------ALFIN1 -->DOF2 --------->ANAC46--------->YAB1  <-----------GT1          <---------ANAC58  --------->MYB46(3)   aaattttttataccaaacttagtttaatgatagaataaatttgtaacgatactataacaaagactcatgggtgtgaaccaaagacaaccacgttctctca  8147200                                                                        -------->HAHB4                                                                        <---------ICU4           <---------ALFIN1                                             <--------ATHB1         <---------ALFIN1                   <---------ARR11(3)         <---------ATHB51         --------->ANAC58   --------->GLK1(2)                          --------->ICU4         --------->ANAC58   <-----------ARR10        *TSS        ----------->GT1 ------>ARR14(2)   ----------->TBP          --------->ARR11(3) --------->LBD16 -------ARR14(2) ------>ZmHOX2a(1)     <---------ATHB12       --------->ANAC46   aatactcacacacacactcctatatataagtatctaatctaatcaagaacttaatttctctcacccgaagttaataattcagtcagaaacacacacacac  8147300                                                                                                   <-                                                                                                -----                                                                                                -----                                                          <------NtERF2                         -----                                                        <---------ANAC46                     <-------                                                        --------->ETT(1)                     <-------              --------->YAB1                         <-----------RAV1(1)                     <-------            --------->ANAC58                         <---------ANAC46                   -------->HAHB4            --------->ANAC46              <---------GLK1(2)  <------ZmHOX2a(1)          --------->YAB1            --------->ANAC58    <-----------------AGL1<-----------HVH21                 <---------ICU4        --------->ANAC58       <-----------HVH21  <---------MYB52(1)                   <---------YAB1        <---------ALFIN1    <---------ANAC58     <-------GAMYB  <------ZmHOX2a(1)   <---------------AGL15        --------->ANAC58    <---------ANAC58    <-----------RAV1(1)---------->DOF2 ----------------->AGL3   acacacacacacacactcaaaactgaattgacttgtcagaaatggaatctctgttgtgtcggaggaggataaagagagtcatggtgctaataatagcgtt  8147400                        <---------ZAT2                 <---------------------WRI1                 <---------LBD16                --------->ALFIN1               ------->MYC3               <-------PIF4               <-------MYC3                                                         --------->CCA1(2)               <-------MYC2                                                         --------->GLK1(1)               ------->MYC2                                                         <---------GLK1(1)               ------->MYC4                                                        <---------ARR14(2)               <-------MYC4                                                        --------->ARR14(2)               ------->PIF5                                                        <---------ARR11(3)               <-------PIF5                                                   ------>MYB46(1)        --------->LBD16 --------->At4g35610                                 --------->AtMYB61      <------NtERF2--------->LBD16                                       ------>NtERF2 --------bZIP60(2)<---------ANAC46                                      --------->DEAR3(1) ---->WRKY38(1)------->PIF4                                      <-------TEIL ------>MYB83 ---->WRKY12  <---------TGA1a                                --------->ARR11(3)  --------->LBD16 ------>HVH21 --------->TGA1a  <------ZmHOX2a(1)             <---------ARR11(3) --------->HSFB2a(2) --ANAC46     ================================================bZIP_DOF<---------ATERF1(1) --ANAC58    ------------>OsbHLH66  ------>MYB83  <------ZmHOX2a(1)  <---------DEAR3(1) --ANAC58   <------------OsbHLH66   ------>MYB46(1)---------->DOF2   --------->DEAR3(1)   gacatggctccgtagcacgtgcggagagctcgaggaccaactattcgaagtaggaaagcttaagatgttcgtcgacgacctcccagatatgcccagactc  8147500                                              --------->RAP2.6(3)                                             <---------ARR14(2)                                  <---------GLK1(2)                                   <----------DOF2                                 <---------ZAT2                                     ------>ZmHOX2a(1)                                 --------->ZAT2              --------->ANAC46    ---------->ID1 <----   <----------DOF2     --------->YAB1        --------->ARR14(2)               <----------DOF2<-------   tatggctttaactctgttcatggtatcatcaaaccagcttctcttcaaatcggcatgttctccactaaatgggtattgttcttttcctctttcaatttct  8147600                       ----------->HVH21                     <---------MYB46(3)                     <------MYB83                     <------MYB46(1)                    <---------MYB46(3)                    --------->MYB111(2)                    --------->ALFIN1                             <---------ANAC58                    <---------DEAR3(1)                           <---------ANAC46                    <---------AtMYB61                            <---------ANAC55(2)                    --------->MYB46(2)                           --------->ANAC55(2)                    --------->MYB111(1)                          <---------ANAC58                    --------->MYB55(2)                           <---------ANAC55(1)                   <---------MYB55(1)                    <---------ANAC55(2)                      <--         --------->GLK1(2)                               --------->ANAC58                        ----        <---------ARR14(2)              --------->TOE2(3)--------->ANAC55(2)                    <----        --------->ARR14(2)              --------->YAB1   --------->ANAC46                     -------        <---------ARR11(3)           --------->YAB1      --------->ANAC58                 -------->HAHB4        --------->ARR11(3)          --------->KAN4(1)    --------->ANAC55(1)              <---------ICU4        <---------GLK1(2)           <---------KAN4(1)   <---------TOE2(3)---------->ID1   --------->ATHB12 ------DOF2        <--------P      <---------KAN4(2)----------------------->TaNAC69(2)   --------->ICU4 --ARR11(3) <---------YAB1<---------ANAC46     <-----------GT1 <-----------GT1           <---------YAB1   ttttcttgaagattcttatgggttggtgactggtgagaataatcttatttcacttgtttacgtaattacgtcttagtcgttttgggaaaaaatgattaga  8147700         <---------ARR14(2)         --------->ARR14(2)        --------->DOF5.7(2)                                                                 ---------      <---------ANAC58                                                                   <-----------HVH21      <---------ANAC46                                                                  <---------YAB1      <---------ANAC58                                                               --------->GLK1(2) -----TEIL                                                                          --------->ARR14(2) ----->ARR14(1)                   --------->DAG2                   --------->ICU4   <---------GLK1(2) -----GLK1(2)                    ---------->DOF2   <---------AHL20(2)               <---------ARR14(2) ---->ARR10                --------->TOE2(3)  <---------YAB1---------->DOF2<----------DOF2<---------MYB52(1)   ttcgttttgcgtttactctcaagtcttcacctaaataaagtgtttttgatgattttttttaaaaaagacataatgggctttggccatattctgttaggcc  8147800  Previous    Next  AGI:  At1g23010.1    Description:  LPR1 (LOW PHOSPHATE ROOT1); copper ion binding / oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor. similar to LPR2 (LOW PHOSPHATE ROOT2), copper ion binding [Arabidopsis thaliana] (TAIR:AT1G71040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78466.1); similar to hypothetical protein OsJ_000201 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10376.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42253.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxi Range:  from: 8147253    to: 8149802    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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