Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                      --------->AtLEC2                                                      --------->ANAC58                                              <---------ARR11(3)                               ------                                              --------->ARR11(3)                               <-----                                              --------->AHL20(1)                               ------            --------->ZAT18               --------->YAB1    <---------AHL20(1)                 <-----          --------->At4g35610       --------->ANAC58  --------->ANAC58                    <---------ZAT6     <---------GLK1(2)              --------->ANAC58<---------ANAC58                      -----------  --------->YAB1                 <---------ATHB12   <---------AtLEC2                    ----------->GT1 ------->WOX13(1)              --------->WOX13(1)   <---------ANAC58                  <---------ZAT14 -------HVH21           <---------At4g35610   <---------AHL20(1)  --------->TOE2(3)   --------->ZAT14   tcagtcagaatgtgctcactggccactgctcataaatcaagaaatcaaaatattgcatgcaatttttttcttaaaaccaaaaacgtagtatagtgaaaat  8143000        --------->AHL20(2)       <---------DAG2      --------->AHL20(2)         <----------DOF2      <---------YAB1                  <---------ANAC46      --------->AHL20(1)      <-----------GT1       <---------ZAT6                   <---------LBD16 --->ARR11(3)        <---------At4g35610           <---------YAB1                  --------->ALFIN1 ----ARR11(3)        --------->At4g35610        --------->ICU4                  --------->DAG2 --->AHL20(1)    <-----------HVH21     <---------HSFB2a(2)                     ---------->DOF2  ----- ----AHL20(1)  ------->TEIL<---------ICU4---------->DOF2                  ----------->GT1 ---------->DOF2 >GT1--------->YAB1  <---------ZAT2    --------->HSFB2a(2)           ---------->DOF2--------->ALFIN1   attctaaaaataatatgtatgtcagctcatttttactttttctaaaagaaattagtattattctataaacaaaaagaagaaaaaagttgggggaaagaga  8143100                                                                                           ----------                   --------->ALFIN1                                 <---------ALFIN1     --------->At4g35610         <---------HSFB2a(2)                                    <---------PCF2           <---------At4g35610         --------->HSFB2a(2)                                --------->ALFIN1     --------->ANAC58    --------->GLK1(2)                                       <---------MYB52(1)   --------->ANAC58 ---->ALFIN1     --------->ALFIN1                          <-------GAMYB     --------->AtLEC2   ggggagaagctcgagaagagtgtgggagaaggcaaaccccaaacactgactagacacagaccgttgggcccgactcttcatgcatgcactcttctgacaa  8143200                                                         --------->YAB1               <---------ARR14(2)                       <---------YAB1               <---------ARR11(1)                      --------->ARR11(3)               <---------ARR11(3)                      <---------ARR11(3)               --------->ARR14(2)                   --------->AHL20(2)               --------->ARR11(3)                   --------->YAB1       --------->ZAT6            --              <---------CCA1(2)                <-------TEIL            --------->YAB1              -- ->HVH21 <-----------GT1         <-----------GT1 --------->TOE2(3)<---------YAB1       ----------->GT1   cattttcaatttctccatatctctctctattgttttttcatttcttagtttcattaatatcatagtttatgaataatactacaagtactatgtaaaatat  8143300                                                                                             <-------              ----------->GT1                                                                *TSS             --------------->AtSPL8                                                      --------->O2             <---------------AtSPL8                                                      <---------At4g35610             --------------->AtSPL3                                                      <---------O2           <---------GLK1(1)                     <---------AHL20(2)                  <-----------HVH21           --------->GLK1(1)               ------------>CBF                      --------->ALFIN1          --------->ARR11(3)              --------->ANAC58                   <------ZmHOX2a(1)   <---          <---------ARR11(3)              --------->ANAC58                 <---------TOE2(3)<--------      ---------->DOF2             <-----------RAV1(1)                 <---------AHL20(2) --------->At4g35610 ------->TOE1(3)               <----------DOF2  --------->AHL20(2)   <---------AHL20(2) --------->MYB59 ------->TOE2(3) ------------>CBF <---------MYB46(3)                 --------->AHL20(2)<-----------RAV1(2)   gccttaaataaagatatcgtacaattcaaaatgcttttgttggaatgcaatttaaactccaaaattcagaatttaatgaggaagtgtggtcaggtcgctg  8143400         <-----------HVH21  --------->ANAC46                                              <---------ANAC58 <----------DOF2            --------->ANAC58                                              <---------ANAC58 --At4g35610                --------->ANAC58                                      --------->ANAC46 ------MYB52(1)  --------->ZAT14                                                <---------ALFIN1 <--- -DEAR3(1)       <---------ZAT14                       ---------->DOF2---------->DOF2  <---------WOX13(1)   ttacttttaagtgtcagtcttcactcactcactcaacatcgtttcaaatttcagagcaaaagtctctaaacccaaagcctctccacttaattgcctattc  8143500                                                                  --------->REM1(2)                                                                  --------->ZAT18                                                                  <---------ZAT18                                                                  <---------ZAT14                             ---------->DOF2                      --------->ZAT14                        <---------ANAC58                       <---------ANAC58                        <---------ANAC58                       <---------ANAC58                       --------->ZAT2                          >>>>>>>>CAMTA3               <----------DOF2                                 <---------ANAC46              --------->TOE2(3)                        >>>>>>>>>RAP2.2                              -   --------->DAG2      <---------ZAT2                <---------ARR11(3)                        ------ ---------->DOF2      ------>MYB46(1)                --------->ARR11(3)  <---------CCA1(2)     ------ ------------AGL15    ------>MYB83                  --------->GLK1(1)  <---------ICU4          ------   ttcaaaaggcgagtttcctttaccaagcttgcaaagttatctaaactccaaacgatatctaaaacgcgtgtactcatttctcttattctttcttcttaag  8143600                                       <--------P                                      <---------MYB52(1)                                 --------->CCA1(2)                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                <---------ARR11(3)                                --------->AGP1                                --------->ARR14(2)                            ---------->DOF2     ---------->DOF2       ------>ZmHOX2a(1)                          <-----------GT1 -------->ICU4             =============HOX2a_HOX2a                  <-----------GT1 --->ANAC58           <---------At4g35610 <---------ZAT6    <----------DOF2 --->ANAC46        ---------->DOF2 <-----------RAV1(2)      <---------DAG2 --->ANAC58      <----------DOF2--------->ARR11(3)       <---------ALFIN1<----------DOF2       <-----   ccatgactaaagatgaagactttaagctcctaaagatccaggtagttttaagactttctccacttttttttttatctttttgcaatagtctctcattgtg  8143700                                                                                                    <                                                                                  --------->HSFB2a(1)                                                                                  <---------HSFC1(2)<                                                                                  --------->HSFC1(2)<                                                                              --------->ANAC58   ----                                                                     --------->ANAC58          ------                                                                     --------->ANAC58          <-----                                                               --------->At5g28300<---------HSFB2a(1)       <---------YAB1                              <---------At5g28300 ---------->DOF2     <---------At4g35610 ----ZAT6 <---------YAB1                   <---------WRKY38(1)----------->GT1 --------->ANAC58<------ZmHOX2a(1)   ttaatggttatgactattgcaaaacacagacgttttcactcagagtcaacattcactgcgagggctgtaacaagaaagtcaagaaacttcttcagaggat  8143800                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   ==                                                  <---------GLK1(2)                                <- <---------HSFB2a(1)          --------->ARR14(2)  --------->ARR14(2)                               -- --------->HSFB2a(1)--------->ANAC58     --------------->AGL15                                     <- ---------TOE1(2)   --------->ANAC58     <---------------AGL15                                     -- ---------TOE2(2)   --------->ANAC46    <-----------------AGL1                                     <- ---------TOE1(3)  <-------MYC3         <-----------------AGL2 <-------TEIL                        -- -->ZmHOX2a(2)     <-------MYC2         <-----------------AGL3--------->CCA1(2)                    <- --->ARR14(2)      ------->MYC3     <---------DAG2<---------ARR14(2)    --------->ICU4   <------ZmHOX2a(1) ----ARR14(2)      ------->MYC2     <----------DOF2   <---------HSFB2a(2)       ----------------->AGL1   cgaaggtttctaaatttcacacatgcaatacatttctgctttactcattttggattctcgatagatacattgtcatgttttgaccaaaacaggagtttgc  8143900  Previous    Next  AGI:  At1g23000.1    Description:  heavy-metal-associated domain-containing protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G06130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42247.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 8143393    to: 8145059    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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