Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <-----------GT1 --------->DOF2 ------->RAV1(1)                                          --------->GLK1(2) ------ID1                --------->ICU4                 <---------GLK1(2) -----ETT(1)              <---------YAB1                 <---------ARR14(2) ->ARR14(2)<---------ANAC58                  <----------DOF2--------->TOE1(3) --ARR14(2)<---------ANAC58       ---------->ID1         --------->ARR14(2)   gacaaagaatattacttggtaagaagacatgattttgtctctgtattctttatgcctcagaacctgaaaatgagacacaaattcaagctcaaattacaga  8126800                           ---------->DOF2                        --------->At5g28300                       ----------->GT1                                 --------->MYB52(1)                      ----------->GT1                                  <---------ARR14(2)                    --------->GLK1(2)                                ---------->TaMYB80        ------                   <---------GLK1(2)          --------->ANAC46<-----------RAV1(2)         --------->YAB1             --------->MYB52(1)              --------->HSFB2a(2)--------->LBD16     --------->ARR11(3)           <---------MYB52(2)          <----------DOF2      <-----------HVH21       <---------ARR11(3)   aatataagctcgaactaacaagaatcggtaaaaggaagaaacttttacccgaactcgctcagtatcaggggaatatcggagaagaaggtctctcatgaaa  8126900                                                                                             <-------                                                                                           ------>ZmHOX2a(2)                                           --------->MYB52(1)                             <------ZmHOX2a(2)                                         <---------MYB52(2)                              --------->ARR14(2)                                        --------->ANAC58                                 <---------ARR14(2)                                        --------->ANAC58                                 <---------AGP1                                        --------->ANAC55(2)                              <---------ARR14(3)                                        <---------ANAC55(2)                              --------->ARR11(3)                                      <--------P                                        <---------CCA1(2)                                  <-----------RAV1(2)                                  ----------->ARR10              <---------ANAC46 --------->At4g35610                                    <--------P            <---------ANAC58   <---------At4g35610                                 --------->DAG2            <---------ANAC46--------->At4g35610                           <---------ZAT14<---------ARR11(3)            <---------ANAC58<---------At4g35610                       ===========================HOX2a_HOX2a  <----------DOF2           --------->HSFC1(2)                        ============================HOX2a_HOX2a  <---------DAG2            <---------HSFC1(2)          ----------->GT1   --------->ZAT14--------->ARR14(3) ->TEIL    <-------TEIL    --------->GLK1(2)  ------->GAMYB           <------ZmHOX2a(1)<-------TEIL   ctagctttatcgattcgtgtggaattgagaagctgctcaggtaagtaacgctcaagagaggtgaacagagaaggactatagtccaaaggtagatcttcat  8127000                                                                                          --------->At4g35610                                                                                          <---------ZAT2                                                                                          <---------At4g35610                                                                              <-------GAMYB  <-------                                                                             <---------MYB46(3)                                                                             --------->MYB55(2)  <---                                                                        ------->PIF5     <-----------RAV1(1)                                                                        <-------PIF5     ============                                                                      <-------TEIL ==================                                           <---------ATHB12      <------ZmHOX2a(1) <-----------RAV1(1)                                    --------->HSFC1(2)       --------->LBD16 --------->MYB111(2)<----                                 --------->LBD16            <---------HSFB2a(2)    <---------REM1(1)<                                --------->ANAC46            --------->HSFB2a(2)    <---------MYB46(3)                           --------->ARR14(2)            <---------ARR14(2) <--------P <---------At4g35610                  --------->ATHB12  <---------HSFC1(2)   --------->ARR14(2)<-------GAMYB<---------RAP2.6(2) --YAB1 <-------TEIL       <---------ARR14(2)           <---------MYB52(1)<---------MYB46(3) --------   agttctcaggctcatgttcttcattaggggttctccgaagcttcaatcttgcctcgccgtttccagaggaggctcgtggttgttgttgttgctgctgctc  8127100                                                                          --------->ANAC58                                                                          <---------ANAC55(2)         --------->LBD16       ------>ZmHOX2a(2)                          --------->ANAC58        --------->HSFB2a(2)   <------ZmHOX2a(2)                           --------->ANAC55(2)        <---------HSFB2a(2)   ===============HOX2a_HOX2a                --------->CCA1(2)       <---------LBD16        --------->CCA1(2)                        --------->ARR14(2) --At4g35610                 --------->AGP1   <---------WOX13(1)       <---------ARR14(2) ------TOE1(3)               <---------ARR11(3)                  ---------->DOF2 =======RAV                  --------->ARR11(3)              ---------->DOF2 =======RAV                  <---------AGP1 --------->ATHB12<---------WRKY38(1) -------RAV1(2)--------->GLK1(2)           <---------YAB1   <---------WRKY12 --------P   <---------HSFC1(2)==============HOX2a_HOX2a   --------->WRKY18(1) ->At4g35610 <---------HSFB2a(1)      <------ZmHOX2a(1)   <-----------HVH21          *TSS   aggttgttttccggaagaatcgagagccatagatctaagaggagtttgattgcacattcaggtcaaagaaagcgatacgcattctagggtttagtttttt  8127200                                                                            ------>ZmHOX2a(1)                                                                       <---------HSFB2a(1)                                                                       <---------HSFC1(2)                                                                  --------->HSFB2a(2)                                                                  <---------HSFB2a(2)           -----                              --------->MYB52(2)      <---------DAG2   --------->HSFB2a(1)      -----                           <<<<<<<<<<MYB80            <----------DOF2  --------->HSFC1(2)       -----           ---------->DOF2<---------MYB46(3)      <---------RAP2.6(2)<---------GLK1(2)        -------    ----------->GT1   --------->ICU4        <---------TOE1(3)  <---------YAB1   ----------->GT1------  <---------YAB1      <---------YAB1        <---------TOE2(3) <-----------TBP ---------->DOF2 <------   tttgatgagtgaaaaaagaagatgatgatggtttgtttgagaggttagggtttcggctttttttttttatagaacctcctcaaagtaaaaaaaaaacgtg  8127300                                <---------------AGL15                               ----------------->AGL2                               ----------------->AGL1                               ----------------->AGL3                               <-----------------AGL3                               <-----------------AGL2                               ======================================================================                              ------>MYB83                              ------>MYB46(1)                                                      --     <---------YAB1           -------->P                                                    --------- ---->WRKY12                 ------>ZmHOX2a(1)                                              <-------- ---->WRKY45              --------------->AtSPL8                                           ---------- ---->WRKY38(1)        --------->MYB52(2)                                                  ---------- >MYC3                 <---------MYB46(3)                 <---------AHL20(2)        <---------AHL20(2) --->ALFIN1      --------------------->WRI1           <---------AHL20(2)    ----------->GT1========== -MYC3           <----------DOF2--------------->AGL15<---------YAB1<---------ICU4   --------->AHL20(2)   gaccattttgatattgtttctttgtttgttcctaccatttttagcaacgctgatttttattttttttggtcattacatcagtaaaattaaaaaaccaaaa  8127400            --------->ICU4          --------->YAB1       ----------->GT1  <---------AHL20(2)                         <---------AHL20(2) ========MADS_MADS                           --------->AHL20(2) --------->GT1                      <---------AHL20(2) ------>AGL15                   <---------AHL20(2)                 --------->ARR11(3) -------AGL15                   --------->AHL20(2)                --------->ATHB12 ------->AGL2                <---------ICU4<---------------AGL15 <---------ATHB12 ------->AGL3             --------->YAB1<-------TEIL      ----------->TGA1            <---------ANAC46 ==========================================================MADS_MADS  <---------------AtSPL8   ttagtaaattagtaataagtctgtattttcatatttatttgattcatataaatagaaatagtgacgaatgattttgtacaaaatgatgcagtggaaatga  8127500                     ----------->GT1                     <---------MYB46(3)                    --------->ICU4               --------->ANAC58                   <---------ZAT6               --------->ANAC58             ------->TEIL <---------MYB59                           <-          <---------ZAT14                   --------->GLK1(2)                                      <-        --------->ZAT14                ----------->GT1   --------->TOE2(3)                      -----        <---------ZAT14     ---------->DOF2 <---------ARR14(2)                              <-------- ----------->HVH21  <---------ATHB12 <---------ZAT14     --------->TOE1(3)           --------->At4g35610   aatgtgacagagcacagaggcaatggttacaaaagagagagaagtgaatctagtgtttacctaaaacatgcttagagtcttgagagaagcagagctttgt  8127600                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           <---------GLK1(1)                                                                                           --------->GLK1(1)                                                                                         <------ZmHOX2a(1)                                                                                        --------->ANAC58 ---------DOF2                                                             <---------AHL20(2)      <- --------DAG2              --------->AHL20(2)         ----------------->AGL3 <-----------GT1<-------- ----->ID1  ------>ZmHOX2a(1)               <-----------GT1                --------->AHL20(2)      -- --DOF2 <-----------GT1    <---------AHL20(2) <-----------GT1 <---------------AtSPL8    --------->ANAC58   acttttggtttttcctcccaaaaatgaaattatatgtttcaacatttttctctattcccaaaaaatggtccaaagaattaaacaatacacaggaaatctt  8127700  Previous    Next  AGI:  At1g22950.1    Description:  oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G18210.1); similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G18210.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42214.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 8125012    to: 8127185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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