Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ARR11(3)     <-------GAMYB                                       >>>>>>>>>>WRKY43    --------->LBD16                                      >>>>>>>>>>WRKY38    <---------DEAR3(2)                                   >>>>>>>>>>WRKY26                           <    <---------MYB46(3)                           <-----------GT1                                  <--    ----------->GT1                           --------->AHL20(1)                                  ---  <------NtERF2                               <---------ARR11(3)                               ------ --------->LBD16           --------->YAB1     --------->ARR11(3)                          ------->GAMYB ------>NtERF2      <---------ANAC46     --------->AHL20(2)                              --------->ANAC58 -------->ANAC46   <-------TEIL   --------->TOE1(2)    ------------------------>ANAC81   --------->ANAC58 ---ATHB12 --------->GLK1(2)  --------->YAB1 --------->AHL20(2)                          --------->ANAC46   tcccgccggttaaaatctagtttcatgtataataatcttacgaataaatatatacaagatgaccaaaatgaaaacaaaatttagataatcaacgcaaatg  8116900                                                                                               <-----       --------->ANAC58                                                                       <------       --------->ANAC58               <---------DAG2                                          <------       --------->ANAC46            ------->GAMYB                                             <-------    <-------TEIL                  --------->MYB46(3)                                       --------->DOF5.7(2) ---------YAB1 <---------TOE2(3)  <---------MYB55(2)                                <---------ANAC58 -------bZIP60(1)      <---------ANAC58<---------DAG2                               <---------ANAC58 ------>bZIP60(1)      <---------ANAC58<----------DOF2                ---------->DOF2    <---------ANAC46 ----->HVH21  ---------->DOF2  --------->TOE1(2)              <---------MYB52(1)<---------AHL20(2)   acatgatacatgccactaaagttttgcttagttccaacgacctttttgcctagttcgtttaatcgttttgtttaaagcatatattatcgtgtcgttaacg  8117000                                                                                                -----                                                                                                -----                                                              <----------DOF2                   -----                                                             --------->TOE2(3)               <------ZmHOX2a(2)                                                       --------->YAB1                       <--------                                                       --------->ATHB12                     ---------                                                       <---------ICU4                 --------->YAB1                                                   <---------ETT(2)                  --------->ICU4 -----ID1                                     <---------At4g35610                    <---------YAB1 ---TOE2(3)                                   --------->At4g35610                  <---------------AGL15 ---TOE1(3)                             <---------YAB1<---------YAB1               --------------->AGL15 --DOF5.7(2) --------->ARR11(3)      --------->GLK1(2)--------->ICU4              ----------------->AGL3   aaaaatgagttgagagaacttgatcacgttgattactaaaatctgattagctgtcgatgattacctttaaaattcaagtctattgccattataagatcat  8117100                                         <---------ICU4                                         --------->ATHB51                                         <---------AHL20(2)                                         <--------HAHB4                                         --------->AHL20(2)                                        --------->ICU4            <-----------HVH21                                        <---------ATHB12          <-----------TGA1         <-------GAMYB                  <---------ATHB51         <---------ANAC46         --------->DAG2         ----------->GT1              --------->WOX13(1)         <---------ANAC58       ---------->DOF2        ----------->GT1    <---------HSFB2a(2)              <------MYB83 --------->HSFB2a(1)   --------->GLK1(2)       --------->HSFB2a(2)             --------->MYB46(2)       ----------->RAV1(1) ---->AtLEC2            <---------ARR11(3)    <---------ANAC46   <---------ANAC58  --------->REM1(1) ---->ANAC58            --------->ARR11(3)   <---------LBD16<------MYB46(1)    --------->At4g35610--- ---->ANAC58            --------->GLK1(2)-------->ATHB1    --------->MYB59 --------->GLK1(2)     <--- -ARR11(3)         ----------->GT1   --------->AHL20(2)    --------->MYB111(1) <---------At4g35610--- >ARR11(3)       ---------->DOF2    <---------ATHB12      <--------P     <---------HSFB2a(1) --------   gcaagaatgtgggttaaaaaaaagaaaatctagaagtaatcaattatttcggatagtagagtaggtagcgtcagaaaattctgctacaacaaaaggggta  8117200                                         --------->ANAC55(2)                                         <---------ANAC58                                         <---------O2                                         --------->TGA1a                                         <---------TGA1a                                         <---------bZIP60(2)                                         --------->O2                                         <---------ANAC46                                         <---------ANAC58                                         <---------ANAC55(1)                         <---------MYB52(1)                        ===========================MYC_MYB             --------->AHL20(1)      <---------ANAC58             <---------AHL20(1)   ---------->ID1         --------->AHL20(2) <------MYB46(1)         <---------AHL20(2) <------MYB83 <---------ANAC55(2)                              <------ZmHOX2a(2)        <---------AHL20(1) --------->MYB46(2)                                       <---------ARR14(2)        --------->AHL20(1) --------->MYB59                                          --------->ARR14(2)        --------->AHL20(2) --------->MYB52(2)                                  --------->ANAC58 ------>ATHB51          <-------GAMYB<---------ANAC58                          --------->ANAC58 ------YAB1  <---------AHL20(2) --------->MYB52(2)<---------ARR11(3)        --------->ARR14(2) ----->ATHB1 --------->AHL20(2)<-------TEIL --------->REM1(2)               <---------ARR14(2)   ---- --->GT1<---------AHL20(2) --------->MYB111(1)<---------ANAC46--------->TOE2(3)--------->ANAC46  ----   ttattgtcaatttaataaaataacacggttaggttcgtcgcttacgtgtcgagttcttagataacctttgaatgcaaaaatacgcagtttcgatccaaca  8117300                                                                                                    -                                                                                                  ---                                                                     --------->YAB1            ------                ------>MYB46(1) ---------->ID1                       --------->AHL20(2)        ------                ------>MYB83*TSS<-----------GT1                      <---------AHL20(2)<-------------      <----------DOF2  <----------DOF2                         --------->TOE2(3)      <----------ID1- ----->ANAC58   --------->MYB52(1)                      --------->ICU4          ---------->DOF2------ ----->ANAC58 <---------MYB59  <-----------GT1      --------->AHL20(2) ---------->DOF2----------->GT1   aggcaacgctttgtgaccaaacagtcttttttttttcccttataaaacaaaaaaaaaaatgattttcttaataaaaagaagggaaagaaggaaaaacaca  8117400                                                      <-------GAMYB                                                     <------MYB46(1)                                                     <------MYB83          <<<<<<<<<TBF1                       <---------DAG2 -------->ANAC58                              <----------DOF2 ------->DOF2                                 <---------------AGL15 --->ANAC58                   --------->YAB1  --------------->AGL15                         --------- --->ANAC58                 <-----------GT1  <-----------------AGL2                 <------MYB46(1)== --------WRI1              --------->YAB1    <---------ANAC58                ------>ZmHOX2a(2)<------ -------->ANAC58        <----------DOF2      <---------ANAC58 --------->ATHB12      <------MYB83   -- --->ANAC46         <---------RAP2.6(2)      <-----------------AGL3   <---------MYB46(3)   <---------YAB1   caaagcaacttcttcttcttgttcggcttttatcatctctgaaaattgctttatttggttgaattcattggattgttgatcgagattggtttactgattg  8117500                                                                               <---------YAB1                    --------->ALFIN1                                         --------->YAB1                  ------>ZmHOX2a(2)                                          --------->ATHB12                 <------ZmHOX2a(2)                                           <---------ICU4                <---------ARR14(2)                                           -------->HAHB4        <-                <---------ARR14(3)                                          <---------YAB1         <-                --------->ARR14(2)       <---------RVE1(1)              --------->At5g28300        <-                <---------ARR11(3)       <---------CCA1(1)            <---------DEAR3(1)          <--                --------->ARR14(3)      --------->ARR11(3)  --------->YAB1  <---------ATHB12    <----            ==========================HOX2a_HOX2a  <------NtERF2    ------>NtERF2               -----            ===========================HOX2a_HOX2a--------->LBD16   --------->LBD16            <----- >ATHB12    =============HOX2a_HOX2a    <---------ARR11(3)  -------->HAHB4  --------->ICU4     <----- ==================HOX2a_HOX2a  ------>ZmHOX2a(2)--------->DEAR3(1)<---------DEAR3(1)     --------->ANAC46 ---WOX13(1)<------ZmHOX2a(1)  <------ZmHOX2a(2)<---------LBD16   <---------LBD16   --------->GLK1(1) ---->ZmHOX2a(2)--------->ARR11(3)     <<<<<<<<<RAP2.2   --------->YAB1 <------NtERF2    <---------LBD16   atcgaaagtatggaggaagatcgtggggaagcgatcgttttagatatttcgccggagattaataatactccggcggtaatgatgagagttccacggagga  8117600                                                      --------->ARR11(3)                                                      <---------ARR11(3)                                                      --------->ARR14(3)                                                      <---------ARR14(2)                                                      --------->ARR14(2)         <----------DOF2                              <---------AHL20(1) --------ANAC58                                       --------->AHL20(1) --------ANAC58                         <-----------ARR10 --------ANAC46              --------->YAB1           <---------ARR14(3) -----TEIL                --------->YAB1<---------ARR11(3) -----ARR14(2)         ----------->GT1  --------->ARR14(2)         --------->HSFC1(2)           ----- ---->ARR14(2)       <---------ZAT14    <---------ARR14(2)         <---------HSFC1(2)           ----- -ZmHOX2a(1)         --------->ZAT14    --------->ARR11(3)        --------->ANAC58              <---- ----HSFB2a(1)  ----------->HVH21      <---------ARR14(1)         --------->ANAC58             <-----   ttcgtgagaggcttttgtctgactgtagtaataagaagacagtatcttctgttcaagatattgaagacaagcttcttcatgcccatctacgaagacaggt  8117700                                                                                  ---------->DOF2  <------------------------ANAC81                                               <----------DOF2 <---------MYB52(1)                                                            <---------ANAC58   <-- ---->ARR14(2)          ------>ZmHOX2a(1)                                      <---------ANAC58   <-- ---->GLK1(2)           <---------YAB1                                  --------->AHL20(2)        <-- -----ARR14(2)  <---------AHL20(2)             --------->ICU4          --------->AHL20(2)     <------ ----GLK1(2)    --------->AHL20(2)<----------DOF2        <----------DOF2<---------AHL20(2)  ---------   tctgttttttttttttttttaatttcctgattaagcctttacctctgaaatgactaagtctttgatttctatatttaatttgcttaaagtttttgtcttt  8117800  Previous    Next  AGI:  At1g22930.1    Description:  T-complex protein 11. similar to T-complex protein 11 [Arabidopsis thaliana] (TAIR:AT4G09150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24647.1); similar to hypothetical protein OsI_015461 [Oryza sativa (indica cultivar-group)] (GB:EAY94228.1); similar to H0525C06.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66841.1); contains InterPro domain T-complex 11 (InterPro:IPR008862) Range:  from: 8117328    to: 8122116    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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