Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      < <---------YAB1                                                                                     < <---------AHL20(2)                                                                                 < --------->AHL20(2)                                                  <---------ICU4               <-- --------DOF2                 --------->YAB1                         --------->ATHB12            <--- ----ARR11(3)        <---------ANAC58                               <---------YAB1            <------ --->ARR11(3)        <---------ANAC58         ---------->DOF2     --------->YAB1            ---------   ctttttattagtcttcaaaacttgcttcaaaatagtaacccaaaactcaaaagagaactctaggcttaacatcattgtccaattctaaattgtgttgtta  8098400                                                <---------ANAC55(1)                                                --------->ANAC55(2)                           <---------AHL20(2)   <---------ANAC46                          --------->AHL20(2)    <---------ANAC55(2) ---------MYB59       --------->AHL20(2)      <-----------GT1 ------------MYB.PH3(2)<---------AHL20(2) <---------TOE2(3)                            <---------ZAT14 ---------MYB52(2)    <---------AHL20(1)  <---------TOE1(3)                            <---------ZAT18 ---------GT1         <---------AHL20(2) ---------->DOF2                               --------->ZAT14 ------YAB1       <---------YAB1 --------->GLK1(1)                        ----------->GT1 ---YAB1    --------->ZAT6<---------AHL20(2)  --------->CCA1(2)           <----------ID1         <--- -->GT1     <---------ALFIN1     <---------GLK1(1)          <-------TEIL <---------------------WRI1   taactaactcatcaacacttctaattaattttatgaaatccattaaagttacgagttcaacatacatgtatggaaaacgataaacacagagcacaaaatt  8098500                --------->LBD16 --------->TOE2(3)               ----------->GT1  --------->TOE1(3)                     <---------RAP2.6(3)               <---------ANAC55(2)                                   <---------------AGL15               <---------------AGL15                         --------->YAB1               --------->ANAC55(2)                           <---------AHL20(2)               --------------->AGL15                         <---------AHL20(1)               <---------ANAC46 <---------MYB59              --------->AHL20(2)              <-------              =======================================================================MADS_MADS              ----------------->AG                    --------->WOX13(1)                    ------>MYB46(1)              ----------------->AGL2                <---------ATHB12 --------------->AGL15  ------>MYB83           <----------DOF2<---------KAN4(2)       --------->WOX13(1)----------------->AGL1 --------->WOX13(1)        <-----------GT1----------->GT1      <---------AHL20(2)      ----------------->AG  --------->AtMYB61     ----------->GT1---------->DOF2         --------->AHL20(2)<---------AHL20(2)    <---------LBD16 ------LBD16  ----------------->AGL3     --------->YAB1 <---------ATHB12           ----------->RAV1(2)   tcggaaattgtaactttccgtaaaaaggaataaacctaaactaaaataaaatcaatcaatcaataaaattgccgaaatttgtaaaccctggaccaatcca  8098600                                                                                  --------->At5g28300                                                                                 ----------->GT1                                                                                <------NtERF2                                                                               <------NtERF2                                                                               --------->LBD16                                                                               ------>NtERF2                                                                              --------->RAP2.3(2)                                                                              ----------->RAV1(1)                                                                              --------->DEAR3(1)                                                                              --------->RRTF1(3)                                                                              --------->RRTF1(2)                                                                             --------->RRTF1(1)                                                                             --------->RAP2.3(1)                                                                            <---------ATERF1(1)                                                                            ------>NtERF2                                                                            --------->ABI4(1)                                                                           --------->ANAC46                                                                           --------->DEAR3(1)            <<<<<<<<<TBF1                                                 --------->MYB46(3)      <<<<<<<<<TBF1                                                   <-----------HVH21   <<<<<<<<<TBF1                --------->YAB1                       <----------DOF2 --ATHB12<<<<<<<<<TBF1         <---------ATHB12           <----------DOF2<---------At5g28300   tcttcttcttcttcttcttcgcctctctctctaatcaaaatttttgtcaatttgaagtctctttgactcttctttcaccgccgcagttaaaaacctcgtg  8098700                                                                                    --------->GLK1(1)                                                    --------->ANAC58                <---------GLK1(1)                                                    --------->ANAC58         --------->ANAC58     ---                            <---------HSFC1(2)     <---------ZAT18           --------->ANAC58     ---                            --------->HSFC1(2)     --------->ZAT18        --------->ARR14(2)      <--                        --------->ANAC46         <---------ARR14(2)       <---------ARR14(2)     <---                        --------->LBD16          --------->REM1(2)     <---------ANAC46     <------NtERF2                       <---------HSFB2a(2)       --------->ARR14(2)   <---------LBD16      --------->LBD16                       --------->HSFB2a(2)       --------->ZAT14     <---------ANAC46     --------->LBD16         --------------->AGL15                <---------ANAC46  --------->MYB52(2) --------->ARR11(3)       <<<<<<<<<TBF1  <---------LBD16         --------------------->WRI1--------->LBD16  <---------LBD16    <<<<<<<<<TBF1 <---------GLK1(2)         ------->TEIL*TSS  <---------MYB52(1)   <---------ARR11(3)   tgattcttcttcttcatatagattcccagaaacatcgaaactggtgaaccgtgtacgcttcgtcgttagtgatgcggagacgaaagatatcgccggaaaa  8098800                                                          <---------ATHB12                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                      --------->MYB46(3)                                                      <---------MYB59                                                     --------->ANAC58                                                  <---------SPL7                                                  <---------ZAT18                                                --------------->AtSPL8                                                --------------->AtSPL3                                               <---------DOF5.7(2)                                             --------->DOF5.7(2)                  --------->At4g35610                                             <---------MYB52(1)              <---------MYB46(3)                                            --------->TOE1(3)               <--------P                                            --------->TOE2(3)  <---------ALFIN1<---------ANAC58                                           --------->ANAC46  ------>ZmHOX2a(1) <---------ANAC58<-----                                     ==============================================MYC_MYB     <-----                                     <---------TGA1a--------->SPL7         <---------ANAC58    <-----    <---------ANAC46                 ================================================MYC_MYB   ------ ----->ATHB1                         --------->TGA1a------->TEIL------>ZmHOX2a(1) <---------At4g35610 ------>ATHB12                       <---------O2<---------ANAC58          <-------GAMYB       ------ -------ICU4                         <---------ANAC46--------->ANAC58      <---------ANAC58    <----- ------YAB1<-------TEIL              --------->O2<---------ANAC58  ------>ZmHOX2a(1)          <------   tcattggcctagattcaatccattagagactcatcggagacgtctacgttagcgtacccaatcctcctcctcttctgggttgtttgctgatcacacatat  8098900                                                                                       ==============                                                                                       ------>ZmHOX2a(2)                                                                                      ===============                                                                                      <------ZmHOX2a(2)                                                                                     --------->AGP1                                                                                     --------->ARR14(2)         <---------GLK1(2)                                                           <---------ARR14(2)      <---------------------WRI1                                                     <---------ARR11(3) <----------DOF2                                                                     --------->ARR11(3) --------------------->WRI1                                              --------->ANAC58 ------ARR10                                                             --------->ANAC58 ----ARR11(1)                                                           ----------->RAV1(1) ----ARR11(3)                   <----------DOF2    --------->LBD16      ------->TEIL<---------CCA1(2) --->ARR11(3)               <----------DOF2      <---------LBD16      --------->MYB46(3) --->ARR14(2)       --------->At4g35610      <---------DAG2          --------->ANAC46<---------AGP1 ----ARR14(2)       <---------At4g35610      <----------DOF2         --------->ANAC58--------->ARR14(3) ---CCA1(2)       <-----------RAV1(2)    <------ZmHOX2a(2)           --------->ANAC58<---------ARR14(3)   cttctttcttcgattctctctcaggtgattctttctttctccgatcacttttccggtctattgtgtaatccacgcaccaaaaaatcagatcttggaactc  8099000             <---------ZAT2             --------->ZAT2             --------->At4g35610                                                               ------             <---------At4g35610     ---------->ID1                                        <---------ANAC58    ------>ZmHOX2a(1)            <----------DOF2                                           <---------ANAC46   --------->TOE2(3)       ---------->DOF2                                                 <---------ANAC58 ==========HOX2a_HOX2a    <---------AHL20(2)                         <----------DOF2  --------->ARR14(2) ==========HOX2a_HOX2a  <---------YAB1 <----------DOF2          <---------WOX13(1)    <---------ARR14(2)   aaattccttatttgcagcttgagtttattaaaagtctttgtctttctgggtttatactataagttgattaactttgacatctaatgtgtatttgctggta  8099100          <---------ANAC46          ------>ZmHOX2a(1)        <---------ANAC46        <---------ANAC58        <---------ANAC58                        --------->REM1(2)      <---------ARR14(2)                     <---------ANAC58      --------->ARR14(2)                     <---------ANAC58   <---------ANAC58                          <---------ANAC46   <---------ANAC58                 --------->AtLEC2   <---------ANAC46             --------->ZAT18<---------ANAC46 ----->HVH21           <---------ANAC46---------->DOF2             --------->GLK1(2)              <--   acagggcgtgtcctgtgtaatcgtttagtggatgtgcaatgcaaaggtcgtgtagaactagaagaagagtttctgtgaacaagtttaatggaaggaacag  8099200                                 <---------MYB52(1)                                           -------                          <-----------GT1                                            ---------->DOF2                      <------------------------ANAC81          --------->ATHB12    <------NtERF2            <----------DOF2     <----------DOF2       <---------ALFIN1            ------>NtERF2 --------DOF2   <------------------------ANAC81  <----------DOF2              --------->ALFIN1-------   cttttacaaagtctctttgtctcttgtttttctcctttgggttcttctcttcttttccaccttgttgattagtcatggagatggtgccaaaggtaacctt  8099300  Previous    Next  AGI:  At1g22882.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44551.1); contains InterPro domain Sad1/UNC-like, C-terminal (InterPro:IPR012919); contains InterPro domain Galactose-binding like (InterPro:IPR008979) Range:  from: 8098756    to: 8101340    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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