Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------->MYC3                                                   <-------MYC2                                                   <-------PIF5                                                   ------->MYC4                                                   <-------MYC4                                                   ------->PIF5                                                   ------->MYC2                                                   <-------MYC3                                                  <<<<<<<<<<HY5                                                  --------->bZIP60(2)                                                  <---------TGA1a                                                  <---------ANAC55(2)                                                  <<<<<<<<<<ABI5                                                  --------->ANAC55(2)                                                  --------->O2                                                  <--------ABF1                   <---------YAB1                                                  <---------O2                   <---------AHL20(2)                                                  <<<<<<<<<<AtMYC2               --------->AHL20(2)                                                <---------ALFIN1                --------->AHL20(2)                                             --------->ANAC58             --------->ANAC55(2)               <---------ARR14(2)            --------->ANAC58             --------->ANAC58               --------->ARR14(2)           <---------ZAT18               --------->ANAC46               <---------TOE1(2)            --------->ZAT18               --------->ANAC58       --------->ANAC58               <------ZmHOX2a(2)                   <---------ANAC55(2)     ---       --------->ANAC58              --------->ARR11(3)                <------ZmHOX2a(2)         <--- ---------ANAC58              --------->At4g35610 --------->TGA1a     --------->ARR11(3)         ---- ---------ANAC58   <---------LBD16   <---------ARR14(2)              <------ZmHOX2a(1)           <--- ----DOF2   <---------ANAC46  <---------At4g35610------>NtERF2     <---------TOE1(2)             ----   gttcttgccaagtatcgtattttcggatgggcttctggcgatctagagcgccacgtgtctatctgttcttaggatcacgaaattaaaattagttttcttc  8083000                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                             <---------AHL20(2)                                               --------->KAN4(2)          <---------ATHB12      <----------ID1                           --------->ARR14(2)       --------->WOX13(1) ------>LBD16<---------ATHB12                  <---------ARR14(2)     --------->MYB46(3)           <- ------HSFB2a(2)                              <----------TaMYB80     --------->ANAC58              -- ----->HSFB2a(2)                             ---------->TaMYB80      --------->ANAC58             --- ------HSFC1(1)                      <---------AHL20(2)     --------->AHL20(2)                    <-- ----->HSFC1(1)                      --------->AHL20(2)     <---------AHL20(2)           <----------ID1   cagaaaaaactacaaatcaaaaattcaagaaaattgaatttatatcgcatattcgcatcaaatttttttgcaaccaattaattcagacaaaaaaacaaaa  8083100                                                                                             <-------                                                                                            ---------                                                                                           <---------YAB1           <-----------GT1                                                                <---------AHL20(2)   --------->HSFB2a(2)      --------->ATHB12                                              <---------AHL20(1)   <---------HSFB2a(2) --------->ARR11(3)                                                 --------->AHL20(2) --------AHL20(2)     <------ZmHOX2a(1)                                                  --------->YAB1 ------->AHL20(2)   <---------TOE2(3)                                                   <---------YAB1 ------>AHL20(2)    <---------TOE1(3)           ----------->GT1                        --------->AHL20(2) -------AHL20(2) <---------AHL20(2)       <----------DOF2<---------TOE2(3)             --------->AHL20(1)   tttttttagaaaataacattttaaggaacttgatttgtttagggcttaacttgaaaattaagtttttggcttcaaaaaacaaaaacaaatattataattg  8083200                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               ------                                                                                              <------NtERF2                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                           <---------At4g35610                                                                                         <---------WRKY12                                                                                        ---------->DOF2                                                                                        <--------P<--                                                                           <----------DOF2 --------->At4g35610                                                                     ----------->HVH21 <-----------HVH21                                                                <-------MYC2           <---------MYB52(1)                                  --------->At4g35610           ------->MYC3        <---------LBD16                                  <---------At4g35610           <-------MYC3  <-----------------AGL1     <----------DOF2    <---------ZAT6      <--------P          ------->MYC2 <-----------GT1<-------- -----CBF             <---------ANAC46    --------->YAB1       <---------ANAC58 <----------DOF2------ >ATHB51   --------->ANAC46 <---------MYB46(3)                 <---------ANAC58 <---------DAG2-------   aacgatgctttaaacgacagcgtttagtgtttgttaagctgtaatggtaagtcaaaataactcgaacgtgtctgactctttactttaccggtaagcggcg  8083300       <---------LBD16      --------->MYB52(1)  --------->YAB1 ---NtERF2 ->NtERF2--------->LBD16 ------>RAV1(1) ----->HVH21                                                                      <-----------HVH21 --DEAR4(2)                                                            <---------ARR14(2) --ATERF1(1)                                                           --------->ARR14(2) --RAP2.3(1)                                                           --------->ARR11(3) -------ALFIN1                                           <------------CBF       --------->MYB59  <--- -DEAR3(1)                                             <---------YAB1 <---------CCA1(2)      -------- --->DEAR3(1)                <----------DOF2      --------->ZAT6      --------->GLK1(1)      <------- -->RAP2.3(1)    ------------>CBF                <------ZmHOX2a(2)    <---------GLK1(1)     <--------   acactgatcaccggagtttttcaatcgcggtctttcttctacttaaatccgatcactaccattgtacatcgtatatctggtttaggtcatgtccaaatct  8083400                                                 --------->CCA1(2)                                                 --------->ARR14(1)                                                --------->ARR14(2)                                                <---------ARR14(2)                                                --------->AGP1                                              ----------->ARR10                                        <------NtERF2                                       ------>NtERF2                                      ----------->HVH21                                      --------->DEAR3(1)                                      <---------DEAR3(1)                                     <------NtERF2                                     --------->ATERF1(1)                                     --------->RAP2.3(1)                                    <---------RAP2.6(1)                                    <---------ORA47(2)                                    <---------DEAR4(2)                                    <---------RAP2.3(1)                                    <---------ATERF1(1)                                    ------>NtERF2<------ZmHOX2a(2)                                    <---------RRTF1(1)                                    <---------ERF1                                   <---------RAP2.3(3)             --------->ZAT18       --------->ATERF1(2)       --------->ALFIN1            --------->DEAR3(1)   <-------GAMYB --------->DEAR3(1)<---------DEAR3(1)   --------->At4g35610             <---------ATERF1(2)   <---------At4g35610             <---------RAP2.3(2)                         <---------ARR14(2)  <---------MYB46(3)              <------NtERF2 --------->ARR11(3)             <---------GLK1(2) ------LBD16 ----------->HVH21    --------->ATERF1(1)   <---------DAG2         --------->ARR14(2) ->ARR14(2)--------->At4g35610    <---------ABI4(1)     <----------DOF2 ------>MYB83                < --ARR14(2)<---------At4g35610  <---------DEAR3(1)------>ZmHOX2a(2)     ------>MYB46(1)            -- -CCA1(2)  --------->ZAT2     ------>ZmHOX2a(2) <---------ARR11(3)     <---------CCA1(2) --------->TOE2(3)   cgggcagttgtggagctcaccgctcgtttcgatctcggcggcgacgataagatccgagctttatctctctcacctatctccgattctcaaaccctagtat  8083500                  ===================HOX2a_HOX2a                 <---------GLK1(1)                 ====================HOX2a_HOX2a                 --------->GLK1(1)                <---------ARR11(1)                <---------ARR11(3)                <---------ARR14(2)                --------->ARR14(2)               <---------ARR14(1)              --------->LBD16            <---------LBD16         ------>MYB46(1)         -------->P         ------>MYB83       <---------MYB111(1)       <---------MYB59      <---------HSFC1(2)      --------->HSFB2a(1)                                          --------->ANAC58      <---------HSFB2a(1)                                          --------->ANAC58      --------->HSFC1(2)                   =============================bZIP_DOF    <---------ARR14(2)        <---------CCA1(2)               --------->O2    --------->ARR14(2) <---------GLK1(2)   <----------DOF2    <---------ANAC58 --------->ANAC46<------ZmHOX2a(2)      <---------ALFIN1      <---------ANAC58                ------>ZmHOX2a(1) --------->TOE1(1)------>ZmHOX2a(2)  <---------ETT(2)         =============================MYC_MYB ---------LBD16<---------CCA1(2)<---------CCA1(2)             --------->TGA1a               --------- ------->TOE1(2)<---------AGP1------>ZmHOX2a(1)         <-----------HVH21       <----------CDC5    <-   acctcggaacctactccggatctctgattctcctatctctcgacactttaactaataccgtctcgcgtctcgcaagtgtatcgctgagcccttctcctgt  8083600                                                             ---------->ID1                                                         <---------ANAC46                                                         <---------ANAC55(2)                                                         <---------ANAC58                                                         <---------ANAC58                                                         --------->ANAC55(2)                                                         <---------ANAC55(1)               <---------At4g35610                                                        --------->MYB52(2)                 <---------ZAT2                                                    ----------->GT1                    -------->P                       ---------->DOF2              <---------MYB46(3)  --------->ARR14(1) --------->At4g35610                      <------ZmHOX2a(1)            <---------ATHB12    --------->ARR14(2)  --------->ZAT2                  <---------ANAC46             <---------ZAT14         <---------ARR14(2)------->GAMYB -->RAV1(2)      <------NtERF2                 --------->ZAT14  <---------YAB1  <----------DOF2 --------ANAC46<---------DEAR3(1)     >>>>>>>ZML2  --------->ICU4      <---------GLK1(2)--------->MYB46(3)   tgagtctatctttgtactcggcgaggaaagagggagagttctagctctctgcaatggttacttgttcttattggattcgcttctttctcaaccagctaag  8083700               ---------->DOF2          --------->ATHB12        <----------DOF2      ----------->GT1      <------MYB83      <------MYB46(1)      <---------MYB46(3)                                                      <---------ANAC58     <---------AtMYB61                             --------->ANAC55(2)        <---------ANAC58   <---------ANAC58            <---------WOX13(1)  <---------ANAC58        ---------->ID1         ---   <---------ANAC58          --------->ATHB12      <---------ANAC55(2)   <-----------RAV1(1)     <---   <---------ANAC46         <---------YAB1         <---------ANAC58    <---------ANAC46          <---  --------->MYB55(2)  <------ZmHOX2a(2)          <------ZmHOX2a(1)     <---------ANAC58          ----  <---------MYB46(3)  ==================================HOX2a_HOX2a    <---------ANAC58 --------->GLK1(1)   agattgggtggtttattgaaagggatcaatgtgattgctaagagagtaagaggacgtgattcgtcgagtactgacttgttgccttctgagatttcaacgg  8083800                                          <---------ARR14(2)                                          --------->GLK1(2)                                <------MYB46(1)                                <------MYB83                             <---------ANAC46                             <---------ANAC58                            <---------HSFB2a(2)                             <---------AtLEC2                            --------->HSFB2a(2)                             <---------ANAC58                       <--------ATHB1                          <---------MYB52(1)                        -------->HAHB4                         <---------At4g35610                        <---------ICU4                         <-------GAMYB    --------->ARR14(2)       <---------ATHB12 ------>GLK1(2) --------->HSFB2a(1)  <---------ANAC46              <---------YAB1 ------GLK1(2)  <---------HSFB2a(1) <---------ANAC46               --------->ICU4 ------ARR14(2) --------->HSFC1(2) --------->ZAT2            <---------ZAT6 ----->ARR14(2) <---------HSFC1(2) <---------ZAT2      <---------YAB1 <---------YAB1             ----   attctagctcgagtaagaagtttcttcagttgcttggtgctgggaatcttgtgagtgatgttagaggtaatgattctagacatgagagagtccaacaagg  8083900  Previous    Next  AGI:  At1g22860.1    Description:  TGF beta receptor associated protein-related. similar to hypothetical protein OsJ_016051 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32568.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47088.1); similar to hypothetical protein OsI_017447 [Oryza sativa (indica cultivar-group)] (GB:EAY96214.1); contains domain PTHR12894:SF4 (PTHR12894:SF4); contains domain PTHR12894 (PTHR12894) Range:  from: 8083389    to: 8089225    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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