Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->MYB52(1)                                   <---------ARR14(2)                                   --------->GLK1(2)                                   --------->ARR14(2)                               <------NtERF2                              ------>NtERF2------>MYB46(1)                             --------->ATERF1(2)                             <---------ATERF1(2)      --------->YAB1                             --------->DEAR3(1)      <---------ATHB12                            <---------LBD16------>MYB83                          --------->TOE2(3)                            --------->ATERF1(1)      --------->MYB46(3)         --------------->AGL15                    <---------ARR14(2)   <---------MYB55(2)                     <---------------AGL15              --------->ETT(2)<---------ATERF1(1)   ------>MYB83              <---------ZAT18              <---------ETT(2)--------->LBD16       ------>MYB46(1)       <---------------AtSPL8            --------->REM1(2)<---------DEAR3(1)    --------->WOX13(1)     --------------->AtSPL8    -            --------->ZAT14------->GAMYB --------->AtMYB61             <---------TOE2(3)       <-----   ------>ZmHOX2a(2)--------->ARR14(2)   --------->MYB46(3)            <---------YAB1      --------->At4g35610  <---------At4g35610     --------->DEAR3(1)--------->ZAT6        ------>NtERF2----------------->AGL3 <---------AGP1    --------->GLK1(1)    --------->MYB46(3)        --------->LBD16--------->TOE1(3)  - ->DOF2 ------>ZmHOX2a(2) --------->ANAC46----------->RAV1(1)   <---------LBD16----------------->AGL2   attgatctgatccctgtagacatatccaacgccggcgaatccaccaacagtaccaatcaacaaaactccggctaagatagtacccttaatagcagcatca  8082500                <---------ICU4             --------->YAB1        --------->LBD16        ------>NtERF2                                                                     --------->GLK1(2)       --------->ANAC58                                                                --------->ARR14(2)       --------->ANAC46                                                              --------->LBD16       --------->ANAC58                                  <---------YAB1            <---------LBD16      --------->MYB46(3)                                --------->TOE2(3)        --------->AtMYB61      ------>ZmHOX2a(2)                                --------->ATHB12          <---------ALFIN1     <------ZmHOX2a(2)                                 <--------HAHB4           --------->MYB46(3)    <---------ARR14(2)                                 <---------ICU4           <---------ABI4(2)   -    --------->ARR14(2)                                --------->ICU4            <---------MYB55(2)--- ----->MYB46(1)<---------YAB1                         <---------YAB1          --------->ARR14(2)  <-- ----ALFIN1  <---------ICU4                  ---------->ID1     <---------ARR14(2)--------->MYB52(1)< ----->MYB83--------->ICU4        --------->YAB1    --------->YAB1            <---------ARR14(2) <---   ccttccgatccgccatcatcatcgctctcagacttaacatcatcttcgtcgttttcatcattagtggatttagaattgaagaaccaccggagactctgag  8082600          <---------MYB46(3)         <--------P        --------->At5g28300     --------->At4g35610   --------->ATERF1(1)   <------NtERF2 --------->ALFIN1                <<<<<<<<<TBF1 <---------DEAR3(1)         <---------ANAC58 -------->ATERF1(1)         <---------ANAC58 ------>ALFIN1              <---------ANAC46 -------DEAR3(1)         <---------MYB52(1)    <----------DOF2        <------ZmHOX2a(1)           <-- ------NtERF2           <-------GAMYB         <---------ANAC58      <---------TOE2(3)            <--- ---ZmHOX2a(1)         <-----------RAV1(1)    <---------ANAC58      <---------TOE1(3)         -------   gaggcggagcggtagatgggagagactgttgcttcttcttcttggtttgctttagggaagagcatggtttaaggaaatggaatcgtttgtagagtctaaa  8082700                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                     --------->At4g35610                                                                    <---------AGP1                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                    <-----------ARR10                                                                    --------->GLK1(2)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <------ZmHOX2a(1)                                                                =============HOX2a_HOX2a          <--                     <---------At4g35610                        <------ZmHOX2a(1)                <---                     --------->At4g35610                      --------->ALFIN1                  <----              <------ZmHOX2a(1)        <---------At4g35610   ================HOX2a_HOX2a        <----            --------->ALFIN1           --------->At4g35610   ===============HOX2a_HOX2a        <-----        <------ZmHOX2a(1)        --------->At4g35610         <------ZmHOX2a(1)                <------      ------------------------>ANAC81<-----------RAV1(2)   --------->ALFIN1      --------->AGP1<----- ----ZmHOX2a(1)  <------ZmHOX2a(1)   <---------ANAC46     ===================HOX2a_HOX2a --------->ALFIN1 -------ID1<------ZmHOX2a(1)     <-------GAMYB            ==================HOX2a_HOX2a<---------ZAT6 --->DOF2--------->ALFIN1       --------->MYB52(2)        <------ZmHOX2a(1) <-----------HVH21 <------   ggacgaagaaggaggaggaggagagcagaagcgggagttgcaggtgaatggaagagaagaggaggaggaggatctgagagtcagacctagagtgaggctg  8082800                                                                                                    <                                                                                              <------                                                                                          <------NtERF2                                                                                          <---------DEAR3(1)                                                                                          --------->ATERF1(1)        <---------At4g35610                                                               <---------RAP2.6(2) -------ZAT18                                                                            <---------LBD16 ------ANAC46                 <---------YAB1                                             ------>NtERF2 --NtERF2  --------->At4g35610--------->ICU4                                            <---------ANAC58 -----At4g35610            <---------YAB1                                               <---------ANAC46 ----ATERF1(1)             --------->ICU4                                               <---------ANAC58 ---DEAR3(1)            --------->ICU4                                              <---------WOX13(1) ----ORA47(2)         <---------At4g35610                       *TSS               <------------CBF < ---RAP2.3(3)<----------DOF2--------->YAB1 --------->ATHB12 <---------ZAT18  <----------DOF2<------NtERF2   cgcattcttaagcagctttaatggagatgatgatgatgaagacgaagattggattgaagcagtgccatctcagtttgggcttttggattggcgcggcttt  8082900                                                   <-------MYC4                                                   <-------MYC2                                                   <-------PIF5                                                   ------->MYC2                                                   ------->PIF5                                                   ------->MYC4                                                   ------->MYC3                                                   <-------MYC3                                                  <<<<<<<<<<HY5                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  <<<<<<<<<<AtMYC2                                                  <---------O2                                                  <<<<<<<<<<ABI5                                                  <--------ABF1                                                  <---------TGA1a                 <---------YAB1                                                  --------->O2                   --------->AHL20(2)                                                  --------->bZIP60(2)            <---------AHL20(2)                                                <---------ALFIN1                --------->AHL20(2)                                             --------->ANAC58             --------->ANAC58               <---------TOE1(2)             --------->ANAC58             --------->ANAC55(2)               <---------ARR14(2)           <---------ZAT18               --------->ANAC46               --------->ARR14(2)           --------->ZAT18               --------->ANAC58       --------->ANAC58               <------ZmHOX2a(2)                   <---------ANAC55(2)     ---       --------->ANAC58              <---------ARR14(2)                <------ZmHOX2a(2)         <--- ---------ANAC58              <---------At4g35610 --------->TGA1a     --------->ARR11(3)         ---- ----DOF2   <---------ANAC46  --------->At4g35610------>NtERF2       <------ZmHOX2a(1)           ---- ---------ANAC58   <---------LBD16   --------->ARR11(3)            <---------TOE1(2)             <---   gttcttgccaagtatcgtattttcggatgggcttctggcgatctagagcgccacgtgtctatctgttcttaggatcacgaaattaaaattagttttcttc  8083000                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                             <---------AHL20(2)                                               --------->ARR14(2)         <---------ATHB12      <----------ID1                           --------->KAN4(2)        --------->WOX13(1) ------>LBD16<---------ATHB12                  <---------ARR14(2)     --------->MYB46(3)           -- ------HSFC1(1)                               <----------TaMYB80     --------->ANAC58              <- ----->HSFC1(1)                              ---------->TaMYB80      --------->ANAC58             <-- ----->HSFB2a(2)                     <---------AHL20(2)     <---------AHL20(2)                    --- ------HSFB2a(2)                     --------->AHL20(2)     --------->AHL20(2)           <----------ID1   cagaaaaaactacaaatcaaaaattcaagaaaattgaatttatatcgcatattcgcatcaaatttttttgcaaccaattaattcagacaaaaaaacaaaa  8083100                                                                                             <-------                                                                                            ---------                                                                                           <---------YAB1           <-----------GT1                                                                <---------AHL20(2)   --------->HSFB2a(2)      --------->ATHB12                                              <---------AHL20(1)   <---------HSFB2a(2) --------->ARR11(3)                                                 --------->AHL20(2) ------->AHL20(2)     <------ZmHOX2a(1)                                                  --------->YAB1 --------AHL20(2)   <---------TOE2(3)                                                   <---------YAB1 -------AHL20(2)    <---------TOE1(3)           ----------->GT1                        --------->AHL20(2) ------>AHL20(2) <---------AHL20(2)       <----------DOF2<---------TOE2(3)             --------->AHL20(1)   tttttttagaaaataacattttaaggaacttgatttgtttagggcttaacttgaaaattaagtttttggcttcaaaaaacaaaaacaaatattataattg  8083200                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               ------                                                                                              <------NtERF2                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                           <---------At4g35610                                                                                         <---------WRKY12                                                                                        ---------->DOF2                                                                                        <--------P<--                                                                           <----------DOF2 --------->At4g35610                                                                     ----------->HVH21 <-----------HVH21                                                                ------->MYC2           <---------MYB52(1)                                  <---------At4g35610           <-------MYC3        <---------LBD16                                  --------->At4g35610           ------->MYC3  <-----------------AGL1     <----------DOF2    <---------ZAT6      <--------P          <-------MYC2 <-----------GT1<-------- -----CBF             <---------ANAC46    --------->YAB1       <---------ANAC58 <----------DOF2------ >ATHB51   --------->ANAC46 <---------MYB46(3)                 <---------ANAC58 <---------DAG2-------   aacgatgctttaaacgacagcgtttagtgtttgttaagctgtaatggtaagtcaaaataactcgaacgtgtctgactctttactttaccggtaagcggcg  8083300       <---------LBD16      --------->MYB52(1)  --------->YAB1 ---NtERF2 ->NtERF2--------->LBD16 ------>RAV1(1) --->DEAR3(1)                                                                     <-----------HVH21 --ATERF1(1)                                                           --------->ARR14(2) --DEAR4(2)                                                            --------->ARR11(3) --RAP2.3(1)                                                           <---------ARR14(2) -------ALFIN1                                           <------------CBF       --------->MYB59  <--- -DEAR3(1)                                             <---------YAB1 <---------CCA1(2)      <------- ----->HVH21                 <----------DOF2      --------->ZAT6      --------->GLK1(1)      -------- -->RAP2.3(1)    ------------>CBF                <------ZmHOX2a(2)    <---------GLK1(1)     <--------   acactgatcaccggagtttttcaatcgcggtctttcttctacttaaatccgatcactaccattgtacatcgtatatctggtttaggtcatgtccaaatct  8083400  Previous    Next  AGI:  At1g22850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44594.1); contains InterPro domain SNARE associated Golgi protein (InterPro:IPR015414) Range:  from: 8080471    to: 8082864    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g22860.1    Description:  TGF beta receptor associated protein-related. similar to hypothetical protein OsJ_016051 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32568.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47088.1); similar to hypothetical protein OsI_017447 [Oryza sativa (indica cultivar-group)] (GB:EAY96214.1); contains domain PTHR12894:SF4 (PTHR12894:SF4); contains domain PTHR12894 (PTHR12894) Range:  from: 8083389    to: 8089225    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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