Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->HSFB2a(2)                       --------->GLK1(1)                   <---------ANAC55(1)    <---------ANAC58   <---------GLK1(1)    <---------ANAC58--------->LBD16  <---------YAB1   <---------ANAC46                                           --------->ALFIN1 ----MYB52(1)      <---------ANAC58                                   --------->ALFIN1 -----DOF2         <---------ANAC58                               ---------->DOF2     <---------ATHB12 -GT1             <---------LBD16 <---------HSFB2a(2)          --------->AtLEC2  ----------->GT1   tgttttgagtggcaacttgttccgggtttctgttttctaaaaacgataagacaacatccaaatcgatgcaaagtggaagagagtggcaataactcttgtt  8071500                          --------------->AtSPL8                          <---------------AtSPL8                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58                        <-------TEIL                        ------->TEIL                      --------->TOE2(2)                      <---------SPL7                     <---------ANAC58                     <---------ANAC46                     <---------ANAC55(2)                     --------->ANAC55(2)                                       <---------ARR11(1)                     <---------ANAC55(1)                                       --------->ARR14(2)   <                     <---------ANAC58                             --------->MYB52(1)                -              <---------ALFIN1                                  <---------MYB52(2)           --------              ----------->RAV1(1)                            --------->ZAT14   <---------ARR14(2)  --              ------->GAMYB --------->REM1(2)                <---------ZAT14   ------->TEIL  --------             --------->MYB46(3) ----------->RAV1(1)          <---------ZAT18   --------->GLK1(2)  <--     ------->GAMYB  <---------------AtSPL3                   --------->ZAT18  <---------ARR14(1)  ---  <-----------GT1   --------------->AtSPL3            <-----------GT1   ---------->DOF2<---------ATHB12   cttgtaacgctctcaaccacattacgtacgtgtacaacaaaactagaatgcttatataactagtccactaactgcaaagcgaatctgcaatggtttcgca  8071600              <---------MYB52(1)             <-------GAMYB  --------->MYB46(3) <------ZmHOX2a(2)                                                                                 <- ---------ARR14(2)                                                                                <-- -------->ARR14(2)                                       <---------ANAC55(2)                    ----- ->ANAC58   --------->MYB52(2)                        <---------ATHB12                        <------ ----->GAMYB<---------MYB46(3)                      --------->WOX13(1)     <----------DOF2    ------- ->ANAC58  <-------TEIL                    <------ZmHOX2a(1)       <---------AHL20(2)--------->GLK1(2) -------MYB52(2)                         <---------TOE2(3)        --------->AHL20(2)<---------GLK1(2) ------>MYB46(3)--------->MYB52(2)    ------>ZmHOX2a(1)--------->YAB1    ------->TEIL--------->ARR11(3)   acgatccaccatgttcgttagttctatcgttcacattgtccttaaggaactgatcaatcatgtaaacatttaatggactttacaaagaatcttgagtcct  8071700                                                                       <---------ANAC46                                                                       ----------->GT1                                       <---------ARR14(2)              <---------ANAC58      <---------AHL20(2)               --------->GLK1(2)    ------->GAMYB      --------->AHL20(2)               --------->ARR14(2)  --------->MYB46(3)      --------->ICU4      --------->ZAT2                 <-----------GT1 ------GAMYB              <---------ZAT2          --------->ANAC58     <---------ANAC58 ---------RAV1(1)         --------->At4g35610     --------->ANAC58    <-----------------------TaNAC69(2) ->ZmHOX2a(1)             <---------At4g35610<--------P<---------MYB59<------NtERF2 ---ZAT14         --------->WOX13(1)<---------ANAC58  --------->ANAC55(2) -->ZAT18     <-----------GT1       <---------ANAC58  <---------ANAC55(2)                  ----------   ctgttgtattaattgtttaccaattaccagcttccatagcgtttctggttgcaagtacttaaccatcttggaggcgtaaacagttttgccagagaaagtt  8071800                                                  ------------>CBF                     ----------->RAV1(1)     <---------AHL20(2)      ----------->RAV1(2)             --------->TOE2(3)                      >>>>>>>>>GATA-1      ===========================RAV <---------ANAC55(2)        <---------YAB1 --------->GLK1(2)--------->YAB1     ----------->GT1     ----------->GT1   ----------->GT1         -- >DOF2<---------At4g35610    ----------->GT1 --------->AHL20(2)--------->TOE2(3)           <------ZmHOX2a(2)   gataatccatctgattctaatgacaacataggggttaaaacgtaaaattaaaaacaatagggaaacattatagaatatagataaacttcagggatcaaaa  8071900                                                                   <---------ARR14(2)                                                                --------->AtMYB61                                                     --------->TOE2(2)                                                     --------->TOE1(2)                                                    --------->MYB46(3)                                                    --------->HSFC1(2)                                                    <---------HSFB2a(1)      <---------ZAT2                                                    --------->HSFB2a(1)      --------->At4g35610                                                    <---------HSFC1(2)    --------->ABI4(2)                        *TSS                      <---------GLK1(2)--------->ARR14(2)                       -------->P                 --------->ARR14(2)      --------->ZAT14                       <---------At5g28300 ------>MYB83     <---------ETT(1) <---------At4g35610                      <-----------GT1      ------>MYB46(1)  ----------->HVH21--------->ZAT2         --------->ANAC46                <---------MYB59 <---------SPL7--------->LBD16         --------->ANAC58                --------->AtMYB61 --------->SPL7--------->ALFIN1         --------->ANAC58  <---------CCA1(2)      <---------ARR14(2) <---------LBD16 -------->DOF2    --------->GLK1(1)    >>>>>>>>>>MYB80   <-----------HVH21<---------ZAT14   tgaaagaatacaagacagagaaatctaccgtctcttcttcaaaccaaacccagaacctccgtccgaccaattccggtgcagctaagaaccagagatagag  8072000                            --------->ANAC58                            --------->ANAC46                            --------->ANAC58                           --------->SPL1(2)                           <---------LBD16                           --------->SPL7                          --------->SPL1(1)                                  <---------ZAT2                         <---------ZAT14                                --------->ANAC58               =====================================HOX2a_HOX2a         --------->ANAC58               <------ZmHOX2a(2)                                     --------->ANAC46             <------ZmHOX2a(1)                                    --------->TOE1(2)         --------->LBD16 <---------SPL7                    --------->LBD16   <---------At4g35610        <---------ANAC46 --------->ZAT14                  --------->LBD16   --------->ANAC58       <---------LBD16<------------------SPL14            --------->ANAC46  --------->ANAC58       <-------TEIL   <---------At5g28300    <---------------AGL15--------->TOE2(2)    --------->CCA1(2)<-----------GT1         ------>ZmHOX2a(1) --------->GLK1(1)               <-----   agatagagatgcggaggatcaattcactgtacggaagaattggtctcctaaaacgagtacccgagaaatctacgaagcaagctcatacatttctcgcatc  8072100                              --------->ALFIN1                                  <---------ARR11(3)                              ----------->TGA1                             -------->ZAP1                              ----------->HVH21                         ----------->HVH21                             --------->At5g28300                        --------->WRKY12                             --------->ATERF1(1)                      <----------DOF2                    <---------ANAC58                                 ------>ZmHOX2a(2)                    <---------ANAC58                                <------ZmHOX2a(2)                   <-------TEIL  <---------DEAR3(1)                --------->AGP1                <---------HSFC1(2)                                 <---------AGP1   ---------->DOF2                <------MYB46(1)  <---------ANAC46                  <---------ARR14(2)                <------MYB83 <------NtERF2                         --------->ARR11(3)              --                --------->HSFB2a(1)                                --------->ARR14(3)              <-           --------->ANAC58 <---------MYB46(3)                     <---------ARR14(3)            ----           --------->ANAC46<---------ANAC46          --------->At4g35610--------->WRKY45   --------->ARR14(2)           --------->ANAC58<---------DEAR3(1)<---------At4g35610   <---------ARR11(3) --------->ANAC58          <---------LBD16  <---------DREB2C(2)       <---------At4g35610--------->WRKY38(1)<---------ARR14(2)    ------>ZmHOX2a(1)   <-----------RAV1(1)  --------->At4g35610   --------->ARR14(2) --------->ANAC58 ----CCA1(2)    <---------HSFB2a(1)--------->At5g28300    ---------->DOF2<---------WRKY18(1)     <---   tctctccttctctacggaaggtgcttatggcggtgacggtgagtttcagcagaacagctccaaagtcaagatctttgaccgagacctcaagcgaatacat  8072200                                                                 <---------YAB1                                                    --------->GLK1(1)   <---------ZAT6                                  <---------ARR14(2)   <---------ANAC46          --- <---------ANAC46                                  --------->ARR14(2)   <---------ANAC58    <-------- ------->ZAT14                                     <---------GLK1(2)    <---------ANAC58    <-------- --------ZAT14                            <---------YAB1       --------->YAB1               <-------- --->MYC3      --------->At4g35610     <---------YAB1         <---------YAB1       --------->ATHB12 ----MYC3      <---------At4g35610     --------->ICU4      <---------ARR11(3)    <---------WOX13(1)   gtgtagtgttcgaattcatcttacatttgcctctctctcttattattaatccagatttcgagttcttataatttgtgtgttcgattgatttgcagcgtga  8072300                --------->ANAC58                --------->ANAC58                --------->ANAC46       <------NtERF2     <---------bZIP60(2)     <---------TGA1a     <---------ANAC46     =================bZIP_DOF     --------->O2     --------->ALFIN1     <---------O2     <---------ANAC58     <---------ANAC58    <------NtERF2                      ----------->HVH21                          <----------DOF2  <---------DEAR3(1)     --------->MYB52(1)                               --------------->AtSPL3    - --->ZmHOX2a(2)<xxxxxxxxxxxxxxxxsmallRNA(i)  <-----------RAV1(1)      <----------DOF2         <------ -ANAC46   <----------DOF2       <----------DOF2        --------->GLK1(2) <---------------AtSPL8    - -ANAC58  <---------ANAC58    --------->GLK1(2)     <---------At4g35610   --------------->AtSPL8    - -ANAC58  <---------ANAC58   <---------GLK1(2)<-------GAMYB        ------>ZmHOX2a(2)          <------   tcgagcggcgtggctttctcgccaaaaaaacgattcttttgttgacgctgttgcagataatctacttgatcgcttagaggtactcttttgtttgatgcat  8072400  Previous    Next  AGI:  At1g22790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34010.1); similar to hypothetical protein OsJ_002345 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12520.1) Range:  from: 8069476    to: 8071551    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g22800.1    Description:  methyltransferase. Identical to Uncharacterized protein At1g22800 [Arabidopsis Thaliana] (GB:O80543;GB:Q84MB4); similar to unnamed protein product [Vitis vinifera] (GB:CAO16311.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) Range:  from: 8071924    to: 8074346    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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