Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------AtLEC2                <----------DOF2           ------>ZmHOX2a(2)         --------->ARR11(3)         --------->GLK1(2)         <---------ARR14(3)         --------->ARR14(3)         <-----------ARR10               --------->DAG2         <---------ARR11(3)        ------>NtERF2                     --------->ANAC58         <---------ARR14(2)     <---------At4g35610         ---------->DOF2         --------->ARR14(2)     --------->At4g35610     <-------GAMYB--------->ANAC58         <---------AGP1   ----------->RAV1(2)          <---------ANAC58  <---------ANAC55(2) <---------GLK1(1) ---------->DOF2<---------ANAC58                      -------- ---->TEIL<------ZmHOX2a(2) ----------->HVH21          <---------ANAC46                     <--------   aatcacttgaagatctgtctttggatgtccctgatgctgccaaaaagttttcaagttgcgttgaaagaggcaagcttgaagggttcttggacgaatcatt  8048700                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                    --------->ANAC58                                                              <--                    --------->ANAC58                                                        <------MYB83              ---------->DOF2                                                               <--------           --------->ANAC58                                                                 <------MYB46(1)           --------->ANAC58                                                               <---------MYB52(1)        --------->ARR11(1)                                                              <---------TGA1a        <---------ARR14(2)                                                          --------->HSFB2a(2)        --------->ARR14(2)                           --------->YAB1                 <---------HSFB2a(2)       <------ZmHOX2a(1)     --------->RAP2.6(3)--------->HSFB2a(2)       --------->TOE2(3) ---------     <---------TOE2(3)      --------->MYB52(1)  <---------HSFB2a(2)       --------->TOE1(3)<---------TOE2(2) ->ATHB12--------->ARR14(1) <---------ARR14(2) <---------LBD16       --------->AtMYB61  ============= -ATHB12<---------GLK1(2)   --------->ARR14(2)------>ZmHOX2a(1)    ----------->RAV1(1)  <---------O2   cgcttctgaggattcgcaaagtaagaaacagaacggctcgtcttcttcctctggatgataacatttgagcaccatacctcaaacctcgagacgttggttt  8048800                                                                                     --------->HSFB2a(2)       <-----------GT1                                                               <---------HSFB2a(2) ------->ANAC58                                                             <---------ANAC58 ------->ANAC58                                                             <---------bZIP60(2) ------->AtLEC2                                                             <---------ANAC58 ------->ANAC46                                                            ----------->STF1 -------LBD16                                                     <----------DOF2<---------ANAC58 -MYB46(3) <----------DOF2                                        <---------DAG2 <---------ANAC58 >MYB52(2)<---------DAG2                             --------->DAG2       <---------TGA2(2)        <- =====================bZIP_DOF                      ---------->DOF2      ----------->TGA1        <---   cacgcaaaatcaccttttggagttttttttttttttttcttataaacaaactaaaaaagttttggatactttttgatgacgtttcttacagaaaacaaat  8048900                                                                        --------->YAB1               <---------ANAC46                                         <---------ICU4               <---------ANAC58        <----------DOF2                  <--------ATHB1      <--------            ----------->HVH21          <---------DAG2                   --------->ATHB12    <--------            ----------->TGA1     <---------ICU4                        --------->ICU4       <--------       --------->TOE2(3)        --------->ICU4                         <---------YAB1       ---------  <----------DOF2     <---------YAB1<-----------GT1                    <---------ATHB12     --------- ----------GT1 <---------bZIP60(2) <---------YAB1              <----------DOF2     <---------ANAC58 ------AHL20(2)<---------ANAC58 <---------YAB1             ---------->ID1          <---------ANAC58   ttatctttatcttagtgacgttttgttatagcacattattactttatgacctgttttttttgttcctttgtcaatgattacattgtcttgctaatatttt  8049000                                                                   --------->O2         --------->AHL20(2)                                  --------->DEAR3(1)         --------->AHL20(1)                                 --------->ANAC58         <---------AHL20(1)                                 --------->ANAC58             *TSS         <---------AHL20(2)    <-----------GT1              --------->ANAC46          <----------DOF2 -AHL20(1)                --------->ARR11(3)              <---------ALFIN1    <---------At4g35610 -ICU4  --------->AHL20(2)<---------ARR11(3)           --------->ANAC58       --------->At4g35610 -ARR11(3)               --------->YAB1                --------->ANAC58       <---------ZAT2 >ARR11(3)              <---------YAB1    ---------->DOF2 --------->MYB52(1)  --------->ZAT2 >AHL20(1)    <---------AHL20(2)   ------>ZmHOX2a(1)   --------->ANAC46--------->HSFB2a(1)   catacagaaattttattttatattctatgatattatcctctcttaaaagctggacaaaccccacggaccacgagtcttccagctaagactttttttagtt  8049100                                                                      <---------MYB52(1)                                                                    --------->MYB52(2)               ---------->ID1                                       <---------MYB46(3)      <------ZmHOX2a(2)                                ------>ZmHOX2a(1)                         ----     <---------ARR11(3)                               --------->TOE2(3)                   ---------->DOF2     --------->ARR11(3)            <---------CCA1(2)  --------->TOE1(2)      <----------DOF2    ----- ---------->DOF2      <----------DOF2              <---------ARR11(3)<-------GAMYB     <----------DOF2   cccaaaagatcgaacttggcgctactttcattttctcatctctgtttttccaacatcctaagaacagagttcgttgctccttttgttttctttaaagaaa  8049200                <-------TEIL            <-----------------------TaNAC69(2)          --------->ARR14(2)          <---------ARR14(2)      <-------TEIL    <---------ARR14(2)                  ------>NtERF2    <---------GLK1(2)                  --------->ANAC46                                  <---------At4g35610    --------->ARR14(2)              --------->ETT(2)              --------->ICU4      <--------P <---   --------->At4g35610              <---------ETT(2)       ---------->DOF2        <---------ANAC46 ----->DAG2 <-------TEIL           --------->DDF1 ------->TEIL    <---------YAB1 <---------At4g35610 ----->DOF2--------->CCA1(2)      <-----------HVH21 <----------DOF2  <---------YAB1  <-------GAMYB  <   aagtcagattcagatacatacatactctgaagaacatgtcgacgcgaagacgaactttactcaaagttataattcttggagacagcgggttagcttattt  8049300     ------>MYB83     ------>MYB46(1)     --------->MYB52(1)    --------->MYB55(1)                  <---------ICU4   <---------MYB46(2)              <---------MYB52(1)   <---------MYB111(2)           ----------->GT1   <---------MYB59              ------>ZmHOX2a(2)              <---------ZAT18    <------MYB83   <---------MYB111(1)   --------->ATHB12                      --------->ZAT18    <------MYB46(1)  --------->ANAC46     <---------TOE2(3)--------->YAB1       <---------------AtSPL8 --------GT1         <---------AHL20(2)<---------YAB1        --------------->AtSPL8 -----------GT1     <---------AHL20(2) <---------ATHB12     <---------ANAC46    <--------P   ttctacctaactgtgttttttttttaatgtttgatccgttaatcattctcttgttgttgtttttgtgtacaaatatcacagggttggcaaaacatcgttg  8049400                                                                                    ----------->GT1                                                                                <---------DEAR3(2)                                                                               <---------At1g77200           ------>ZmHOX2a(1)                                                   <---------DREB2C(2)          <---------MYB59                              --------->YAB1          <---------DEAR4(1)       <---------ARR14(2)                              --------->ANAC55(2)     <---------DEAR3(1)       <---------ARR11(3)        <----------DOF2   <----------DOF2          <-----------RAV1(1)       --------->ARR14(2)     <-----------GT1<-----------GT1   <---------YAB1<-----------HVH21   --------->YAB1   <----------DOF2       <---------GLK1(2) --------->ICU4--------->At4g35610 ------->TEIL       <---------DAG2   <----------DOF2  ---------->ID1      <---------At4g35610   atgaatcagtatcctaactaaactttttgatttttctttctttggattttcttcttttcgtaattttgatttttgtagctgtcggtgagaaaaaaaaaac  8049500                                                                       <---------ZAT2                                                                       --------->At4g35610                          --------->CCA1(2)                            <---------At4g35610                         --------->ARR11(3)                        ------>ZmHOX2a(2)                         <---------ARR14(2)                        =============================HOX2a_HOX2a                         --------->ARR14(2)                 --------->TOE1(2)     --------->ZAT6             <-----------GT1----------->GT1             ---------->DOF2--------->ZAT2      --------->At4g35610  <----------DOF2        <---------ARR11(3)       --------->ZAT6  <------ZmHOX2a(2)      <------ZmHOX2a(1)  <---------DAG2<---------------AGL15          <---------WRKY38(1)==============================HOX2a_HOX2a   ttagctttttttttttttcaatttgtagatatgtgaataacaagtttagtcaacagtacaaagctacgatcggagctgattttgtcactaaggagcttca  8049600  Previous    Next  AGI:  At1g22730.1    Description:  MA3 domain-containing protein. similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67544.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60675.1); similar to Putative topoisomerase [Oryza sativa (japonica cultivar-group)] (GB:AAN05329.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891) Range:  from: 8046138    to: 8049028    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g22740.1    Description:  RAB7 (Ras-related protein 7); GTP binding. Identical to Ras-related protein Rab7 (RAB7) [Arabidopsis Thaliana] (GB:O04157); similar to AtRABG3a, GTP binding [Arabidopsis thaliana] (TAIR:AT4G09720.1); similar to unknown [Populus trichocarpa] (GB:ABK95304.1); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578) Range:  from: 8049089    to: 8050697    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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