Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------AHL20(2)                               --------->AHL20(1)                               --------->AHL20(2)                               <---------AHL20(1)                               <---------ARR11(3)                   --------->ZAT14                               --------->ARR11(3)             <-----------GT1   <---------At4g35610                     --------->MYB52(2)                  ----------->GT1        --------->At4g35610       <-----------GT1         <---------AHL20(2)    --------->AHL20(2)       <---------ZAT14 --------->GT1    <----------DOF2 <---------AHL20(2) <---------AHL20(2)--------->ZAT6        <------- >TOE2(3) <----------DOF2     --------->AHL20(2)--------->AHL20(1)  <---------ZAT14     ----------->GT1   tttgttaataaacttttcatctttagttacaaatatattttttataaacatatattaaaatgtataacagtttacagtagtatgctgaattagttatttt  8045300                                                                               ------>MYB83                                                                             <---------MYB59                                                                        --------->ANAC55(2)                                                                        <---------ANAC58   --------->ARR11(3)                                                   <------MYB46(1)      --------->ANAC46   --------->ARR14(2)                                                   <------MYB83         <---------ANAC55(2)<---------ARR11(3)                                       --------->AHL20(2)               <---------ANAC58   <---------ARR14(2)                                       <---------AHL20(2)              <---------------AtSPL3    ----                                       --------->AHL20(1)              --------------->AtSPL8  ------                --------->MYB59        <---------AHL20(1)   --------->MYB52(1) ------>MYB46(1) ------     <---------MYB52(1)             --------->YAB1 ----------->GT1     --------------->AtSPL3------>ZmHOX2a(2)   --------->ANAC46               --------->AHL20(2)     --------->ANAC46  ------->TEIL   =========== --YAB1  <----------DOF2        <----------DOF2 <------ZmHOX2a(1)     <-----------GT1     <------ZmHOX2a(1)   tgtagacgttacttttgtaaggtcgattttctaacttttaataaattcgaggatggtatacaaaactgaaatttacgtacctacacaaatgaggatcgtc  8045400             --------->ANAC58             --------->ANAC58                                  <---------DEAR3(2)                   -           ------>ZmHOX2a(2)           <-----------------AGL1 <---------DEAR3(1)                 ====         --------->ARR11(3)            <-----------------AG <-----------HVH21               <--------   <----------DOF2                  --------->HSFB2a(2)    --------->DEAR3(1)               <-------- ------->HVH21                     <---------LBD16      <---------ALFIN1                   --------->ANAC58 --->At4g35610                  <----------DOF2      --------->ARR14(2)                    --------->ANAC58 ----->RAV1(2)                 <---------ANAC58    <---------HSFB2a(1)            <-------TEIL   ==== =================HOX2a_HOX2a  <---------ANAC58    --------->HSFB2a(1)       <------ZmHOX2a(1)   ----   tgactctttctgatctcgcaagtcgcatcgatagctttcgggactattttggcaagttccaccgtcggtacaaatattaggacgtccatttgcaagctcc  8045500                           --------->TOE2(3)                                          ----------->HVH21                          <---------ICU4                                         --------->ANAC58                          <--------HAHB4                                         <---------ANAC58                          --------->YAB1                 <---------YAB1          --------->ANAC58                         <---------ATHB12             <---------------AGL15      <---------ANAC55(2)             <---------LBD16<---------YAB1           --------->YAB1              <---------ANAC58           <---------ARR11(3)                      <---------ARR11(3)           --------------->AtSPL3           --------->ARR14(2)                      --------->ARR11(3)   <---------ANAC46 -------->ZAT6           <------ZmHOX2a(2)       <---------YAB1         <---------ANAC58 ===============================HOX2a_HOX2a <---------At4g35610         <---------ANAC58      ------- -At4g35610--------->ARR11(3)      --------->At4g35610--------------->AGL15 <---------------AtSPL3 -ZAT2     <---------ARR14(2) --------->YAB1--------->At4g35610    --------->YAB1--------->ANAC55(2) ============================HOX2a_HOX2a  <-----------RAV1(2)     --------->ICU4<---------------AtSPL3 -->ZmHOX2a(1)        ------>ZmHOX2a(2) ------->TEIL ------>ZmHOX2a(2)  <---------bZIP60(2)<---------   ttacactcgtcaatatctggatgatcgatcattaatgagatgaatcagatgatgatcttaatatagtattgatgacttggagtacgtactgacctttaca  8045600                                                         ------------>CBF                                                       <---------ETT(1)                                                       --------->DREB2C(2)                                                      -------->ZAP1                                                    <---------WRKY18(1)                                                <---------ICU4                                                --------->ATHB12                                              <---------ARR11(3)                                              --------->ARR11(3)                                             --------->YAB1                                    <---------YAB1 --------->WRKY38(1)        <---------YAB1                                  <---------At4g35610 --------->DEAR3(2)    --------->YAB1                                 --------->ICU4<---------YAB1              --------->ICU4                               --------->At4g35610 --------->WRKY12       --------->ANAC58 <---------MYB52(1)        <---------KAN4(2)<---------YAB1       <---------At4g35610 --->DOF2             --------->LBD16    <---------AHL20(2)      --------->At4g35610  ---------->DOF2 -DOF2     --------->MYB52(1)  <---------At4g35610 ----------->HVH21      --------->ANAC58 ----------   gccgtttagaacataagggttacccgtggaatgtgctgatgattttatgatcattgaccgacaattcagcagtggcaaggattatagtaaaagtcgtaaa  8045700                                                                    --------->YAB1            <------                                   --------->ANAC46      <---------TOE2(3)                 <---------ARR11(3)                    <------------CBF             --------->YAB1    <---------YAB1          --------->AHL20(1)     <------------CBF       <-----------GT1     <---------YAB1   --------->YAB1            <---------AHL20(1) ->GT1            --------->ARR11(3)      ------------>CBF    <------------CBF        ------------>CBF   ctgtttccattgcattctaagaaattgtttcaactatacgatactacaatatgatagttgaggtcattgatcataaactgtttgatactacaatattttt  8045800                                                                                                    -                                                                                           <---------AHL20(2)                                                                                           <---------YAB1                                                                                          <---------AHL20(1)                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                                                          ----------->GT1                 --------->AHL20(1)                                                         <---------ZAT6                  --------->YAB1       <---------YAB1                        ----------->HVH21                        >>>>>>>>>GT-1-- ------------>CBF                        --------->MYB46(3)                        ----------->GT1<-- ---AHL20(2) <------------CBF     <----------DOF2        ----------->GT1       <-----------GT1    ---   tgatacaatatgaaaaattgtttgaaaactctacctctttgtaacaaatgacagtaagagtgttaaaaattttgtttcatttttctggttaatataattc  8045900                                                             <---------AHL20(2)                                                          <---------AHL20(2)                                                         <---------AHL20(2)    <----------DOF2                                  <---------AHL20(2)   <---------DAG2                                    --------->AHL20(2)                  ---------->DOF2 ------>GAMYB <---------TOE2(3)                  <---------ANAC55(2)            ---------->DOF2 ------->MYB46(3)     <------ZmHOX2a(1)        --------->AHL20(2)        <------ZmHOX2a(1) -------At4g35610    ----------->GT1       <---------AHL20(2)<---------YAB1 ----------->GT1 ------>At4g35610   ----------->GT1     ----------->GT1  --------->AHL20(2) <---------ANAC46     ----   aactgcctttttttttaagaaataggaaaatagagactgaaatagtaaattacatataattttataatttgtgaaggagcgtaaaagactcaaaagaaat  8046000                                       <------------CBF                                      <---------AHL20(2)                                      --------->ATHB51                                      --------->ATHB12                                      -------->HAHB4                                      <---------ICU4                                      -------->ATHB1                                     <---------YAB1                                     --------->LBD16                                     <---------ATHB51                                  <---------HSFC1(1)                                     --------->ICU4                                    --------->HSFC1(1)                                --------->TOE2(3)               ----------->GT1        <---------HSFB2a(2)                   ----------->GT1 --------->YAB1 <---------------AGL15          --------->AHL20(2)--           --------->AHL20(2)   <----------DOF2   --------------->AGL15          <---------AHL20(2)--   ---------->DOF2<---------LBD16 <---------AHL20(2)       ---------->DOF2      <---------AHL20(2) <- ------->GT1   --------->MYB52(1) --------->AHL20(2)   ---------->DOF2---------->DOF2  --------->HSFB2a(2)   ggtaaaaaagcattaaaaaacggggaaatagtttctttaattattgtattaacaaaaaaaagaaagaagtaataaagtcttatttatttccagaaacaaa  8046100                                                                                                  ---                                                                                                  <--        --------->AHL20(2)                                                                       ----    <---------AHL20(2)                       ------------>MYB.PH3(1)                             ----    --------->AHL20(1)                    --------->AHL20(2)                                     ----    --------->AHL20(2) ----------->GT1*TSS<---------AHL20(2)                               <--------- ------->AHL20(1)    <------------CBF <---------AHL20(2)     <------ZmHOX2a(1)             <------NtERF2 ------->AHL20(2)  <---------AHL20(2)<---------AHL20(2)    --------->ALFIN1              <---------DEAR3(1) --------AHL20(2) --------->AHL20(2) --------->AHL20(2)   <------ZmHOX2a(1)     <<<<<<<<<TBF1    <---   ataaaataaaataaatcccataaaattgaaaaaatcaaattaaataaaatcagttacagaggaggagcacatcatcgtgttcttcttcgactcggcgatt  8046200  Previous    Next  AGI:  At1g22720.1    Description:  wall-associated kinase, putative. similar to WAK2 (wall-associated kinase 2), protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G21270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68231.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain EGF-like calcium-binding; (InterPro:IPR001881) Range:  from: 8044221    to: 8045654    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g22730.1    Description:  MA3 domain-containing protein. similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67544.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60675.1); similar to Putative topoisomerase [Oryza sativa (japonica cultivar-group)] (GB:AAN05329.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891) Range:  from: 8046138    to: 8049028    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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