Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ZAT6                                <---------ATHB12                     <----------DOF2                                  <---------AHL20(2)                  --------->ARR11(3)                                  --------->AHL20(2)       <---------ALFIN1       ------>ZmHOX2a(1)              ---------->DOF2   --------->ANAC58 --------->YAB1   --------->GLK1(2)                      <---------ZAT18       --------->ANAC58 ------>WOX13(1)  <---------ARR11(3)                     <---------ZAT14       --------->ANAC46     - --ZmHOX2a(2)    <---------GLK1(2)                       --------->ZAT14  ----------->HVH21         -   caatcttcaacactctgaagaatcttttattcctatcactccctactagataaaacctctgcacaaagaaaattatatgacaagcaattcaatctagggt  8002500               <------------ATHB5               <---------ICU4               --------->YAB1               -------->ATHB1              <---------ATHB12            --------->WOX13(1)     XXXXXXXXXXXXXXXXXXXX>MIR4227                                                               <----    <---------TOE2(3)                                                                          ------   --------->MYB52(1)            ---------->ID1                                               -------   <---------DOF5.7(2)  ------->GAMYB                                                    --------->HSFB2a(1) -------->TOE2(3)      <---------ALFIN1                   ----------->GT1                <---------HSFB2a(1) -------->TOE1(3)    ----------->RAV1(1)                 <---------AtMYB61       <---------MYB46(3)   tcccttaacgattccaatcattccaacacacatttttcgcattagagagtgcctaagcgatggtgaaatcaaatgagaaacgtttgatgcaatcttcctc  8002600                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                     <---------LBD16                                                                                   ------->TEIL                                                                                   <---------ARR14(2)                                                    <---------ANAC46               --------->ARR14(2)                                       <---------At5g28300                         --------->GLK1(2)    <----------DOF2                <---------At4g35610                          --------->ANAC46 -----ICU4                         --------->At4g35610   <---------ZAT6      <---------SPL7------>ZmHOX2a(2) >ZmHOX2a(1)                      <---------TOE2(3) <---------ANAC58 --------->HSFB2a(2) <---------ARR14(2) -->TOE2(3)                       <---------TOE1(3) <---------ANAC58 <---------HSFB2a(2) --------->ARR14(2)   attagtctttagaatcaacaatttctgaatcggtttaagcttaccgctctggtttcgtagagtttgaatttctcgagggcatacgaatcgggatcggact  8002700                 ------->TEIL            <-------GAMYB           <---------MYB46(3)           ----------->GT1           <---------DEAR3(2)          <---------DEAR3(1)         <---------ORA47(1)           ---------->DOF2                            --------->WOX13(1)       <---------SPL7        ---------->DOF2                    --------->ARR14(2)       ----------->HVH21  <------NtERF2            <---------MYB52(1)          <------ZmHOX2a(2)   --------->ATHB12  <-----------RAV1(1)         <---------MYB46(3)  ----------------->AGL1   ctgcatcgttggacggttgaatcttgttggcgaaagaagagaaagtcgaagtcgttgagttttccgatttcgccatattggatcaatctatctatctgga  8002800                                <-----------RAV1(2)                           <---------MYB46(3)                                                <-------                          <---------AtMYB61                                                  --------                       <---------DEAR3(1)                                                   <--------                      <------NtERF2                                                         <--------                     --------->LBD16                                                        ---------                     <---------DEAR4(2)                                            <---------ANAC58                     ------>NtERF2                                                 <---------ANAC58<-                    <---------ATERF1(2)                                           --------------->AtSPL3                    --------->DEAR3(1)                                            --------------->AtSPL8                    <---------DEAR3(1)                 ---------->DOF2            <---------------AtSPL3                    --------->ATERF1(2)            ------>ZmHOX2a(2)    --------->DAG2<---------TOE1(2)                   --------->ATERF1(1) <------ZmHOX2a(2)--------->DAG2--------->CCA1(2) <---------DAG2    <------ZmHOX2a(2)<---------ATERF1(1)          <------ZmHOX2a(2)  --------->ARR11(3) <----------DOF2   gaaacgatcaaacactctgaagccggcgatggtttcaggcgatcattttgcgatcggaaaagtgttcggaagataaggggtgttttcgtacttttctatt  8002900          --------->ATHB12         <---------YAB1    ==============================HOX2a_HOX2a    ------>ZmHOX2a(2)  --------->ARR11(3)  >>>>>>>>>ARR1                    <----------DOF2                                                  -  >>>>>>>>>ARR2                  *TSS                                     <---------AHL20(2)        -  --------->ARR14(2)           ---------->ID1                            --------->AHL20(2)         <  <---------ARR14(2)       ------>ZmHOX2a(1)              --------->AHL20(1)                        - <------ZmHOX2a(1)        --------->TOE2(3)               <-----------ARR10<---------YAB1           < --------AGL15          <---------YAB1                    --------->ARR11(3)            --------->AHL20(2) ------->AGL15         <-----------GT1                    <---------AHL20(1)    ----------->GT1     < ---------AGL2        --------->YAB1                      <---------ARR11(3) <------------CBF      -- ---------AGL3    <---------AHL20(2)         <----------DOF2         <---------AHL20(2) <---------AHL20(2) -------->AGL3    --------->AHL20(2)      <---------ARR11(3)         --------->AHL20(2)--------->AHL20(2) --------TOE2(3)  --------->AHL20(1)   <----------DOF2   <---------CCA1(2)--------->AHL20(2)   ------   ttaggatcgtgttcattgaattaattatcctttgtccctttctttatctttttgaactaatatcttactcttaaattaaaattggataaatttataagaa  8003000              <---------AHL20(2)        --------->TOE2(3)      <---------YAB1   <---------YAB1                                                                            <-------   <---------AHL20(2)                                                                       --------- -------->AHL20(2)                                                                     ----------->GT1 -------->AHL20(1)                                                                --------->YAB1 ---------AHL20(1)                     ----------->GT1                          --------->AtLEC2  <-- -------->ARR11(3)            <------------CBF              <---------GLK1(1) <---------ANAC58    <-- ---------AHL20(2)          <-------TEIL         <---------TOE2(3)   <-----------GT1  --------->DAG2 ---------ARR11(3) <---------AHL20(2)  <----------ID1       --------->GLK1(1) <---------AtLEC2  <---- ------->AHL20(2) --------->AHL20(2) ---------->DOF2    --------->YAB1        <---------ANAC58  <---- --->AHL20(2) --------->AHL20(2)----------->GT1 <-----------GT1   --------->ARR14(2) ---------->DOF2   aatatattattcttaatttataaaatttgatacattgtaaaaagaaaaattaacatattcagaattcagatttacattttgcatgcataaagtaatattt  8003100                                   --------->ICU4                                                 <--                   <---------RVE1(1)                                                     <---------AHL20(2) --ICU4--------->ZAT14      --------->AHL20(2)--------->ARR11(3)                         --------->AHL20(2) >ICU4 <---------ZAT14  <---------YAB1        <---------ARR11(3)                         --------->AHL20(1) -------ANAC58     <---------CCA1(1)  <---------WOX13(1)            <---------At5g28300 --------->AHL20(2) -------ANAC58    --------->ARR11(3)--------->ATHB12               <-----------GT1      <---------AHL20(2) -------GT1       <---------ARR11(3)-------->HAHB4             <----------DOF2   ---------->DOF2----- -----AHL20(2)   <<<<<<<<<RAP2.2   <---------YAB1           <---------YAB1  --------->AHL20(2) <-----   acttgaatgtatactgtttagatattttgattaaaaaatgattgttaagctcttaattgtttatgctttttactgttttaaaataaagaattaaattgtg  8003200                             <---------YAB1                            <---------AHL20(2)                            --------->AHL20(1)                            <---------AHL20(1)                            --------->AHL20(2)                           --------->YAB1                  <------MYB46(1) --------->AHL20(2)                  <------MYB83    <---------AHL20(2)                  <---------ANAC55(2)                  ----------->GT1<---------AHL20(1)                 --------->MYB111(1)     ----------->GT1    <---------ICU4                                    <----------DOF2          -- --------->ARR11(3)    --------->ICU4                                 <---------ANAC58        ------- -------WOX13(1) --------->MYB46(2)        ------------>CBF     <----------DOF2          <---------AHL20(2) ---->ATHB12     --------->MYB59 <---------AHL20(2)  <-----------TBP  <---------ANAC58------->TEIL<-- ----YAB1      <---------MYB52(1)--------->AHL20(2)<---------GLK1(1) ---------->ID1--------->ANAC55(2)   attgatattgtttattagttaggtaaaaattataatttaatttgtttcaatggatatttgtagggtcttttggcttctttcacttatgtattttaagtca  8003300                                                          --------->ANAC58                                                          --------->ANAC46                                                          ------>MYB46(1)                                                        ------->GAMYB                                                       --------->MYB46(3)                                                      --------->ANAC58                       <-------                                                      --------->ANAC58                    --------->ARR14(2)                                                    --------->MYB46(3)               ------>MYB46(1)    *TSS                                          --------->AtMYB61                  ------>MYB83   <---------ANAC58                            --------->ANAC46    ----------------------->TaNAC69(2)   <---------ANAC58                            --------->ANAC58    <----------DOF2 --------->AtMYB61 <---------YAB1                         --------->ARR14(2)------>MYB83   <----------DOF2  <---------ARR14(2) ------->YAB1         <---------ALFIN1  <---------ARR14(2)--------->AtLEC2      --------->ANAC46 ----->CBF  <---------ARR11(3)------>ZmHOX2a(2)--------->ANAC58<---------GLK1(2)--------->ANAC58 -------ATHB12     --------->ANAC46     <---------ARR11(3)--------->ANAC58      --------->ANAC58   ataatccttgtcaacatattccctccacatgatccgtttcaatatccacaaaccacaaccaagcaaattctttagctttctcacaccatccatattcact  8003400  Previous    Next  AGI:  At1g22620.1    Description:  ATSAC1 (SUPPRESSOR OF ACTIN 1); phosphoinositide 5-phosphatase. similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT5G20840.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G43220.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G14205.1); similar to hypothetical protein OsJ_024747 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41264.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65008.1); similar to hypothetical protein OsI_026572 [Oryza sativa (indica cultivar-group)] (GB:EAZ05340.1); contains InterPro domai Range:  from: 7997665    to: 8002933    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g22630.1    Description:  heat shock protein binding / unfolded protein binding. similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96480.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305) Range:  from: 8003304    to: 8004293    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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