Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC46                                                                <---------ANAC58                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              --------->ABI4(2)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                             ----------->HVH21                                                            <-------GAMYB                                                            <------NtERF2                                                            <---------ABI4(1)                                                            --------->ATERF1(1)                                                           <---------RAP2.3(1)                                                           <---------MYB46(3)                                                          <---------RAP2.6(2)                                                          <---------ANAC46                                                          <---------DEAR3(1)                                                          <---------DREB2C(2)                                                          <---------DEAR4(1)                                                          <---------ANAC58                                                          <---------ANAC58                                                         <---------ABI4(1)                                                         <------NtERF2                                                        <---------ERF1                                                       --------->ALFIN1                                                       <---------DEAR3(1)                                                    <---------AtMYB61                                                    --------->ALFIN1--------->At5g28300                                                 <---------MYB46(3)----------->GT1                                                 --------->ALFIN1------>NtERF2                                               --------->ZAT2<---------DEAR3(1)                                               <---------At4g35610<---------DEAR3(1)                                               <---------ZAT2--------->ALFIN1--------->ANAC58                                               --------->At4g35610<------NtERF2                                              <---------ARR14(2)<---------ANAC46                                              --------->ARR14(2)<---------ANAC58                                     --------->TOE2(3)--------->ATERF1(1)    --------->ANAC46       -                       ------>ZmHOX2a(1)  <---------LBD16--------->ATERF1(1) --------->ANAC58      <- ---->ZmHOX2a(1)      --------->ANAC46<----------DOF2<---------MYB46(3)    <-----------GT1         -- ---DOF2------>ZmHOX2a(1)   <----------DOF2 --------->LBD16<---------ATERF1(1)        ---------->DOF2   cctctgtttcctctgttttcttctcctcaactttctcttcctttaccggagctggtggtggcggtggcgcggtgaattcacgcttgttcaaagcctccct  7958000                                                                                                 <---                                                                                             ========                                                                                             ========                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                            =========                                                                                            ---------                                                                                            =========                                                                                            <--------                                                                                           --------->ARR14(3)                                                                                           <---------ARR14(3)                                                                                           --------->ARR11(3)                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(3)       <----------DOF2                             --------->ANAC58   ==============================HOX2a_HOX2a  ------>MYB46(1)                                  --------->ANAC58   =============================HOX2a_HOX2a  ------>MYB83                    <---------At4g35610              ------>ZmHOX2a(1)       <---------  -------->P                      --------->At4g35610              =================================HOX2a_HOX2a ------>GAMYB   --------->At4g35610     ------>ZmHOX2a(1)          ================================HOX2a_HOX2a -----------MYB.PH3(2)            --------->ZAT2 --------->At4g35610  ------>ZmHOX2a(1)    <---------AGP1 ------->MYB46(3)  ---------->DOF2<---------ZAT2 <---------At4g35610 --------->TOE2(3)     <---------ARR14(2)   aaccaactcctttaactcagccaaagcattcttctcagcttcctgtaattcagaagccaaatagccttcctccttaaacgactccgattgcaagatctcc  7958100                               <------NtERF2                               <---------MYB52(1)                               ----------->HVH21                              <-----------TGA1                              <-----------HVH21                              ------>NtERF2                             --------->bZIP60(1)                                                  ---                             --------->O2                                                        ----                             <---------ATERF1(2)                                                 <---                             --------->RAP2.6(2)       <---------ZAT2                            ----                             --------->DEAR3(1)        ========================bZIP_DOF          ----                             --------->ANAC46          --------->O2                              ----                             --------->ATERF1(2)       --------->bZIP60(2)                      <----                             --------->RAP2.3(2)       --------->TGA1a                        -------                             --------->RRTF1(2)       ------>NtERF2                        <---------                             --------->RRTF1(3)      <---------ALFIN1                      --------->ATERF1(1)                             --------->RAP2.3(3)     --------->DEAR3(1)                    ==========                            --------->ERF1         <---------ATERF1(1)                    <---------At4g35610                           --------->ABI4(1)       <-----------HVH21                      --------->At4g35610                           ------>NtERF2           --------->ABI4(1)                      <---------ZAT2                          --------->DEAR3(1)       ------>NtERF2                          --------->ZAT2                          --------->ANAC46        --------->ANAC58                     --------->LBD16                         --------->MYB46(3)       --------->ANAC46                    <---------HSFB2a(2)                     <-----------HVH21            --------->ANAC58                    --------->HSFB2a(2)                    <----------DOF2               --------->DEAR3(1)                 <---------LBD16               ------>ZmHOX2a(1)<---------ALFIN1  --------->DREB2C(2)             <---------ANAC58---   <-----------HVH21=============================================bZIP_DOF         <---------ANAC58---  --------->ANAC46------>ZmHOX2a(1)              --------->RAP2.3(1)             --------->HSFB2a(1) -------DOF2  <---------ALFIN1<---------ATERF1(1)<------NtERF2--------->ANAC46   --------->At4g35610 ========================HOX2a_HOX2a             --------->ATERF1(1)             <---------HSFC1(2) =====================HOX2a_HOX2a                --------->MYB46(3)              --------->ZAT2 ----- =====================HOX2a_HOX2a                --------->DEAR3(2)              <---------At4g35610- >GLK1(1)  ------->GAMYB<---------At5g28300      --------->DEAR4(2)              --------->HSFC1(2)-- ========================HOX2a_HOX2a             --------->ERF1               --------->LBD16 ------- -GLK1(1)  --------->AtMYB61--------->RAP2.3(1)  --------->ORA47(2)        ------>ZmHOX2a(1) <------- --ARR10  --------->MYB46(3)--------->RRTF1(1)  <---------ATERF1(1) <----------DOF2 --------->MYB52(1)   tttcccgtcgcaacctcctcctctttcaccgccgtcacctctgtttcaggcaccgccacctcagacacaactttctcctccgtagcttccggagcaggcg  7958200       <----------DOF2     --------->ZAT2     <---------At4g35610     --------->At4g35610   <---------ALFIN1 <---------ALFIN1 ----------->RAV1(1) ------>DEAR3(1) ----->RRTF1(1) ---NtERF2                        ------->GAMYB ----->ATERF1(1)                 --------->MYB46(3) ----->ERF1                 --------->AtMYB61                     --------->MYB46(3) ----->RAP2.3(1)           --------->ANAC58          <---------HSFC1(2) -----ATERF1(1)            --------->At4g35610       <---------HSFB2a(1) -->RAP2.3(1)              --------->ANAC58          --------->HSFB2a(1) --RAV1(2)                ------>NtERF2              --------->HSFC1(2) ============RAV         <---------ALFIN1   --------->LBD16   ------>ZmHOX2a(1) ------>RAP2.3(3)     ------->GAMYB  --------->TOE1(3)       --------->TOE2(3) ------>RAP2.3(2)     --------->ANAC46------>ZmHOX2a(1)<---------ARR14(2) ---->At4g35610      --------->DEAR3(2)    <---------LBD16   --------->TOE1(3) -------->MYB46(3)   <------------AtMYB77 <---------LBD16  ------>ZmHOX2a(1)                   ------ ---->NtERF2       <---------ARR14(2)--------->TOE2(3) --------->ARR14(2)                     <------ -->ATERF1(1) --------->LBD16  <---------ALFIN1    <------ZmHOX2a(1)                  <------MYB83 --ATERF1(1)<---------LBD16<---------At4g35610  <-----------RAV1(2)                   <------MYB46(1)   cagccacagctttctccgtagtaaccggcacctcaacctccttaaccggggcaggagtttcctccttaaccactggaacagaggcagtaggtttctgtat  7958300                 --------->ANAC55(2)                 <---------ANAC55(2)             <---------ARR11(3)       --------->ARR11(3)                                  --------->ARR11(3)            --------->YAB1            <---------ARR11(3)                          >>>>>>>>>TBF1    -- ->TEIL     <---------ICU4     <----------ID1            --------->CCA1(2)     >>>>>>>>>TBF1 <------- ---CCA1(2)--------->ICU4 ---------->DOF2   ---------->DOF2                 >>>>>>>>>TBF1 <---------ARR11(3)   ctcttcttgagccatgatcacttgattcgaaagggaacaagaactagaaagagagagagagatggaattgagagagaagaagaagaagaagagttcttat  7958400                                                                                <---------MYB46(3)                                                                                <-----------RAV1(1)                                                                              --------->ZAT2                                      <---------ANAC58                        --------->At4g35610                                      <---------ANAC46                        <---------ZAT2                                <---------YAB1                                <---------At4g35610                               *TSS   <---------ANAC58                      <------NtERF2--------->At4g35610                          <---------ARR11(3)                              <---------DEAR3(1) -------->DOF2         <------ZmHOX2a(1)                                  --------->ETT(1) --YAB1   ----------->GT1 --------->ARR11(3)             ---------->DOF2<-----------HVH21<---------At4g35610   aaaaagagagaagagagaaaatggaggagatgttatgtttgtgtgtgtgtgagaagagcaaaagagaacagactggtcggagctgttggacagctaattt  7958500                                                           <---------ANAC58                                                      <----------DOF2                                                  --------->RAP2.6(2)      ===============================================================================================      <----------DOF2                        --------->RAP2.6(3)                            ---------      <---------------AGL15                  --------->SPL7<---------ANAC58                 ---------  --------->ARR11(3)                        --------->MYB52(1)                             <---------ICU4  <---------ARR11(3)                   <-----------------AGL1                        --------->YAB1  <---------ARR14(2)           <-----------GT1--------->MYB46(3)              <-----------GT1    ----  --------->ARR14(2) <---------PCF2 <----------DOF2<---------RAP2.6(3)     --------->ARR14(2)    <---   ggaagatacttttcttagtagagggtcccaaattttctctttctccaaacggccgtcttttgcttctctcaattttggattcaccaattttaaacattaa  7958600                                                                                         --------->AHL20(1)                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                      <------ZmHOX2a(1)                    --------->AHL20(1)                                            ---------->DOF2                    <---------AHL20(1)                                           <------ZmHOX2a(1) ============MADS_MADS          --------->YAB1                                 <---------TOE1(3) >TOE2(3) <----------DOF2 --------->ANAC55(2)                --------->ZAT6    <---------TOE2(3) >TOE1(3) <---------DAG2<-----------GT1               --------->ARR14(1)   <---------HSFB2a(2) ----------->AGL15  --------->ARR11(3)               <---------GLK1(2)     --------->HSFB2a(2) ------------AGL15  <---------ARR11(3)  <----------DOF2<-------TEIL  <-----------GT1 ----------->GT1   ctaatttagcaacttttttgaatattttacttattcatattccttttatattttagattcgttacactaattttcttctctaaggaaaggatatattgtc  7958700                                                                                                 <---                                                                                                 ----                          ------>ZmHOX2a(2)                                     <---------AHL20(1)                         <---------GLK1(1)                               <----------DOF2<---------TOE2(2)                        <---------ARR11(3)                    <---------CCA1(1) --------->ARR11(3)                        --------->ARR11(3)                    <---------RVE1(1) <---------ARR11(3)                  <---------DAG2                    --------->KAN4(2)   ------>ZmHOX2a(2)   <-------TEIL          <-----------HVH21                         --------->ARR14(2)<---------ARR11(3)<---------TOE2(3)  <-----------GT1 <----------DOF2                   <---------ARR14(2)--------->ARR11(3)<---------TOE1(2)   taatttactcacagtcacagctttttgatctccgattcacttctaactcttgcatattctttggatatttttgatcttttgatatattcttaggttcatt  7958800                                                                                             --------                                                                              <---------ANAC58                                                                              <---------ANAC46                                           <---------AHL20(2)                 <---------ANAC55(2)                               <---------HSFC1(1)                             <---------ANAC55(1)        --------->HSFB2a(2)    >>>>>>>ZML2--------->AHL20(2)                  --------->ANAC55(2)        <---------HSFB2a(2)    --------->HSFC1(1)                             <---------ANAC58 ------AHL20(2)                <---------HSFB2a(2)                     --------->YAB1        <------- ----->AHL20(2)                --------->HSFB2a(2)               <---------YAB1  ---------->DOF2   --   ttattctcttccaaaacttggttcgcatgagttctagacctagatttaatatcaagagagttatgttatgttttcatattacgtaaagacaacttcgaga  7958900  Previous    Next  AGI:  At1g22530.1    Description:  PATL2; transporter. Identical to Patellin-2 (PATL2) [Arabidopsis Thaliana] (GB:Q56ZI2;GB:Q9SK94); similar to PATL1 (PATELLIN 1), transporter [Arabidopsis thaliana] (TAIR:AT1G72150.1); similar to hypothetical protein [Cicer arietinum] (GB:CAB95829.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038); contains InterPro domain Cellular retinaldehyde-binding/triple function Range:  from: 7955482    to: 7958431    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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