Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ----------->RAV1(1)                                                               ------->GAMYB                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58                                                            --------->MYB52(1)                                                         --------->ANAC58                                      <---------ARR14(2) --------->ANAC58                 --------->ANAC58     --------->ARR14(2)--------->ZAT18                 --------->ANAC58  <---------ANAC55(2)--------->ZAT18        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        <---------STY1(1)    <---------AHL20(2) ---------------->AGL1     ------>NtERF2  --------->LBD16--------->ANAC46   --------->TOE2(3)      <- ---------------->AGL2    --------->DEAR3(1)--------->SPL7 --------->ANAC46--------->YAB1        <--- >ARR14(2)     ---------->DOF2     --------->ANAC55(2)<---------ZAT18  --------->AHL20(2)        ---- -ARR14(2) ----------->RAV1(1)<---------ALFIN1    --------->STY1(1)--------->ICU4         <----------   ataccaattccagcaccaaaagcaatcgacgcccatctcgtaaccggactccctagggcacacaacgcaacaattaatcgtcaaaacacaaaaaaccatt  7954000             ------>ZmHOX2a(1)            --------->TOE2(3)       <---------ICU4       <---------AHL20(2)                                <---------YAB1    ------>MYB83                                       --------->YAB1                     <---------ICU4    ------>MYB46(1)                                 --------->YAB1                       <---------ATHB12  --------->TOE2(3)                          --------->TOE2(3)                         ------>MYB46(1)  <---------MYB59                            --------->TOE1(3)                         ------>MYB83 ----------GT1    -------->HAHB4       --------->YAB1  <---------ICU4                --------->TOE2(3) ------AHL20(2)   --------->ATHB12   --------->ANAC46 <---------YAB1<---------GLK1(2)<---------MYB59- ----->AHL20(2)  <---------ATHB12    --------->ANAC58<---------ARR11(3)        --------->LBD16   ---- -GT1 <---------ATHB12               --------->ANAC58--------->ARR11(3)    <---------REM1(2)     <---   taaacctaataaatcctaaatgattcaaatcggaacaacactcaaaaccctaaatgatcatgaattctcagtttctctacccagaaacctaatcagtaat  7954100                                                                                           ------>NtERF2                                                                                          --------->DEAR3(1)                                                                                         <----------CDC5                                                                                         <------NtERF2                                                                                         --------->ATERF1(1)                                                                                        --------->ABI4(1)                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                       --------->RRTF1(2)                                                                                       --------->RAP2.3(3)                                                                                       --------->RAP2.3(2)                                                                                       <---------ATERF1(2)                                                                                       --------->ATERF1(2)                                                                                       <---------DEAR3(1)                                                         ------>MYB46(1)               --------->DEAR3(1)                                                         --------->MYB52(1)            --------->RRTF1(3)                                                         ------>MYB83                 --------->ERF1                                                        <---------ZAT14               --------->RAP2.3(1)                                                        --------->ZAT14               --------->ORA47(2)                                                       --------->DEAR3(1)             <------NtERF2                                         --------->ARR14(2)                           --------->ATERF1(1)                                         <---------ARR14(2)                           --------->RAP2.6(1)                                         <---------ARR11(3)                           --------->DEAR4(2)                                         --------->ARR11(3)                           --------->RRTF1(1)           --------->ANAC58        --------->ALFIN1    <---------MYB46(2)            <---------RAP2.3(1)       ----------->HVH21        --------->DAG2        --------->ANAC58               <---------ATERF1(1) -------->ZAT6        --------->YAB1  <---------ANAC46--------->ANAC46               <---------DEAR4(2) ----->YAB1--------->ANAC46    ---------->DOF2        --------->ANAC55(1)          <---------ABI4(2) ------ICU4--------->ANAC58 --------->YAB1            --------->ANAC58          ---------->DOF2   caacactatgtgaacggaattgaatcataagaataaagtgggggatattggaaaacaccgaactgaagaagagaagaccggcgaaagcgccgccgaggga  7954200                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                        --------->TOE2(1)                                                        --------->TOE1(1)                                                  --------->WRKY12                                                  --------->WRKY38(1)                                                  ----------->HVH21   <---------MYB52(1)                                                <-------GAMYB        <-------GAMYB                                               <---------ANAC58   --------->At4g35610                                               <---------ANAC46   <---------At4g35610        <-------                                   <---------ANAC58    <---------At4g35610                  <--------          <----------ID1           <---------ANAC58    --------->At4g35610        <---------DEAR3(2)      ---------->DOF2    <------ZmHOX2a(2)     <---------ANAC58   <---------ZAT2---------->ID1   agagtagacaaagcgacgagcagtgagatcgagacaagcgtcccatttggcgttgacatcggactcgctgctgttactcttcgtcgtttccatttttccg  7954300                                                                                    <---------HSFB2a(2)                                                                                   ------>ZmHOX2a(2)                                                                                 <---------ARR14(2)                                        <---------DAG2                           --------->ARR14(2)                                        <----------DOF2                          <---------AGP1                                    <-----------GT1                --------->HSFB2a(2)  <---------GLK1(2)     <---------GLK1(2)                          <---------HSFB2a(2) ----GT1     <----------DOF2       <-----------GT1      <---------MYB52(1)   <-----------GT1 ---GT1     <---------DAG2      <---------GLK1(2)      --------->LBD16   <---------AHL20(2)   actcgattcttctacctttccgatttgattctcagaatttccctttttctgttcttccgctattcgcttctcgattttttttcgatctggaggttttttt  7954400                                                                     <---------ANAC58           <----                                                                     <---------ANAC58          <-----                                                                     --------->ALFIN1          ------                                                   --------->HSFB2a(2)                         ------                                               <----------DOF2      ------->MYC3               <-----                                             ---------->ID1         <-------MYC3           <---------MYB46(3)       *TSS    <------------CBF          <---------DAG2         ------->TEIL     <---------ARR11(3)   <-----------RAV1(2)                   <----------DOF2        <-------TEIL     --------->ARR11(3)  <---------ZAT18                     <---------YAB1        <---------KAN4(2)   <---------CCA1(2)   <  --------->ZAT14                 <---------DAG2   <---------HSFB2a(2)        --------->YAB1 <-------   tttgtgcaggcgaagaatattgggccgattaatgggccttatgctttttctttttggaagggaatgtacatgtgtgccattcatatctcatggtcgtttg  7954500                               ------>MYB83                               ------>MYB46(1)       <------MYB46(1) <-------PIF5                                  --------->ZAT14       <------MYB83    <-------MYC2                                  <---------ZAT14      <---------AtMYB61<-------MYC3                                --------->ANAC58     <--------P        <-------PIF4                                --------->ANAC46   <---------ANAC46    ------->PIF4                                --------->ANAC58   --------->ALFIN1    ------->MYC3                             <---------ZAT14   <-----------RAV1(1) ------->MYC2                       <-----------HVH21 ---GAMYB              ------->PIF5            <---------AHL20(2)<---------ALFIN1           --------- ----MYB46(3)          ------->MYC4            --------->ICU4   <---------ZAT18             --------- --->MYB52(2)       <---------ANAC58         <---------CCA1(1)  --------->ZAT14             --------- --->MYB55(2)       <---------ANAC58        --------->ARR11(3)--------->ANAC46              --------- ------RAV1(1) <---------AtLEC2-------->P   <---------ARR11(3)--------->ANAC58           <---------REM1(2) ---------AtMYB61   <---------ANAC46 <---------ZAT18  <---------AtLEC2   <---------ARR11(3) --------- --MYB52(1)  --------->AtLEC2 <---------ALFIN1 <---------YAB1 --------->ANAC58       <---------YAB1   ttgtggtgttggtccatgcatggcatgtgcccctacctatgcactagatattattagcatggtcactccactccagttcttaatattcttatacacgcaa  7954600                                                                                 <----------DOF2                                                                               <---------At4g35610                                                                               --------->ZAT2    ----                                                                               <---------ZAT2    <---                                                                          <------MYB46(1)      ------                         ------>ZmHOX2a(1)                                <------MYB83        <------ZmHOX2a(2)                         <----------DOF2                                 --------->MYB59     <-------                         <---------DAG2                                  <---------MYB46(3)  --------                   <---------ICU4                                    <---------MYB46(3)      --------    <-------TEIL--------->YAB1                                      <----------DOF2          -------- >ANAC58        <---------ICU4                                     <---------ANAC58        ---------- >ANAC58       <---------YAB1                 <----------DOF2   <---------ZAT18--------->At4g35610 >ANAC55(1)    --------->ICU4      --------->TOE2(3)     --------->ARR14(2)  <---------WRKY12<------- >ANAC46     --------->YAB1        <----------DOF2       <---------ARR14(2)<-----------HVH21 <------- >AtLEC2    <---------YAB1      <-----------GT1     <----------DOF2<---------ANAC58 <---------ETT(2)   attgcatacatgtgataataataagtcctttttgtaactttagacaggctttttctttggatactgtgtgcttgttgggtcagctttcgacataagatcc  7954700                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <-----------ARR10                                                                                 --------->AGP1                                                                                 <---------GLK1(2)                                                                                 <---------ARR14(3)                                                                                 --------->ARR14(3)                                                                                 <---------ARR14(2)                                                                                 <---------ARR11(3)   <-----------GT1      <---------AHL20(2)                                       --------->ARR11(3) -->ZmHOX2a(1)          --------->ATHB51                                         --------->ARR14(2) ------YAB1             --------->AHL20(2)                                     ----------->ARR10 >ZmHOX2a(2)            --------->ATHB12                                     <------ZmHOX2a(2) --ARR14(3)             <---------ICU4                --------->MYB52(1)    <---------ARR11(3) ->ARR14(3)            --------->ICU4       --------->O2                    <---------AGP1 ->ARR11(3)         <---------AHL20(2)      <---------O2             --------->ZAT14       --------->HSFB2a(2) ->ARR14(2)         --------->AHL20(2)      <---------TGA1a          <------ZmHOX2a(2)     <---------HSFB2a(2) ->ARR10           --------->AHL20(2)       --------->TGA1a        --------->At4g35610     <---------LBD16 --ARR11(3)   <----------DOF2       <-----------RAV1(1)            <---------At4g35610 <----------DOF2 --ARR14(2)   ========================================bZIP_DOF <-----------HVH21<---------CCA1(2)   tgatttttcaatactgcttcatttaattatttggcattttgtggccaagtgagactaaacggagttgtcagatcactagatcagatcttctttctcggaa  7954800                               --------->REM1(2)                            <---------ANAC55(2)                            --------->ANAC55(2)         --------->At4g35610<---------ANAC46                  --------->GLK1(2)         <---------ZAT2     <---------ANAC58                  --------->ARR11(3)       <-------TEIL         <---------At4g35610<---------ANAC55(1)               <---------ARR11(3)     <---------SPL7  --------->MYB52(1)        <---------ANAC58             --------->At4g35610       <---------TOE1(2)  --------->ARR14(2)      <-----------GT1                <---------At4g35610     <---------SPL7  <---------ARR14(2)<-------TEIL <---------ZAT14 <---------YAB1     --------->YAB1 --------->SPL7   gacatatcggaagctgataagtttcattttacgtgtatactatatcaaattatgttttcagcaaaatctatagtatttagagtcggacgtacaaatgtgt  7954900  Previous    Next  AGI:  At1g22520.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72170.1); similar to unknown [Populus trichocarpa] (GB:ABK94376.1); contains InterPro domain Protein of unknown function DUF543 (InterPro:IPR007512) Range:  from: 7953011    to: 7954407    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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