Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>NtERF2                                               <---------DEAR3(2)                                               <------MYB46(1)                                               <------MYB83                                               <---------ATERF1(1)                                              <---------MYB46(3)                  <---------ARR11(3)          <---------DEAR3(1)                  --------->ARR11(3)     --------->ZAT14        ------>NtERF2<----------DOF2     --------->ZAT18                                <---------ANAC46        ----------->RAV1(1)              <---------ZAT18                         <------NtERF2        <-----------HVH21                <---------ZAT14                         <-------GAMYB       <---------ETT(1)                 --------->ALFIN1                        <---------MYB46(3)       --------->DEAR4(1)             <---------ANAC46                         <---------ANAC46       --------->At1g77200          --------->ZAT18<------NtERF2              <---------LBD16       --------->DEAR3(1)         --------->At4g35610           --------->ZAT14<---------ANAC58       --------->DREB2C(2)        <---------At4g35610           <---------ZAT14<---------ANAC58       --------->RAP2.3(3)   <---------MYB46(3)<---------ORA47(2)    --------->At5g28300<---------ANAC58       ----------->HVH21    --------->ALFIN1  <---------DREB2C(2) <---------At5g28300   <---------ANAC58      --------->RAP2.3(1)   <xxxxxxxxxxxxxxxxsmallRNA(i) <---------PCF5--------->SPL7  ------>NtERF2   atggtatcgccgacagagaaggtctttccagtggtgagcggagtgtagtcggtgccaagggaccagttcaccgtaagactggcggatgaggcctgtgcga  7935000                                <---------ZAT18                      --------->ANAC58                                                  <------------                      --------->ANAC58                                               <-----------GT1                 --------->ANAC58                                             <---------TOE2(3)                 --------->ANAC58 <---------At4g35610                   <---------YAB1 <---------YAB1             <------ZmHOX2a(1)  --------->ZAT18                         <---------AHL20(2)     <-----            <----------ID1      --------->ZAT14                        <---------AHL20(2)   <--------      --------->ARR14(2)       --------->ALFIN1  <----------DOF2   --------------->AGL15-------------      <---------ARR14(2)------->GAMYB         <-----------GT1      ==================================      --------->GLK1(2)--------->MYB46(3)  <---------AHL20(2)   <-----------GT1     --------->ICU4---   ccatagagaatatgaggacaagacaaccaagaagtgtgctcatatttttttctttatgttttatatatactatttttattaagggaattactattttatg  7935100                                         --------->ALFIN1                                  --------->DAG2                        <---------AHL20(2)                        --------->AHL20(2)<-------GAMYB              --------->YAB1 ---AGL15           --------->CCA1(2)  <---------ANAC46              <------ZmHOX2a(1) ----YAB1          --------->ARR14(2)  --------->ALFIN1            <---------TOE2(2)       <---------YAB1 -AHL20(2)         <---------ARR14(2)<---------ANAC46              <---------TOE2(3)   <---------ANAC58 -->AGL15          <---------ARR11(3)<---------ANAC58              <---------TOE1(2)   <---------ANAC58 ===MADS_MADS      --------->ARR11(3)<---------ANAC58         --------->ARR11(3)    <----------DOF2 ---->TEIL<---------ANAC46      --------->CCA1(2)             <---------ARR11(3) <-----------GT1   aaacttcttgtgacttatgcagatatatatatagataaggggtgtgttgatttagtcgagttaacatcttaggataactcttatttctttcttacgataa  7935200                                                                                                  <--                                                                                      <---------ICU4                                                                                      --------->YAB1                                                                                  --------->AHL20(2)                                                                                 --------->AHL20(2)                            <----------ID1                                    --------->AHL20(2) <---                            ----------->GT1                                ----------->GT1       <---                           ----------->GT1           <---------CCA1(2)    ----------->GT1       -----                        ---------->DOF2  ----------->GT1            --------->YAB1<---------AHL20(2)         <---------------AtSPL8          --------->ANAC58          <---------ATHB12--------->WOX13(1) ------>ZmHOX2a(1)    ----------->HVH21  --------->ANAC58          <------ZmHOX2a(2) <---------ATHB12   ctcctaattagtttgtacttagctctgaaagggaaaaacaaacaagaaaattggcatatcatttggccgatcataagggataaattaatcatcagttatc  7935300                      --------->CCA1(2)                     --------->AHL20(1)                     --------->ARR11(3)                    --------->AHL20(2)                 <---------AHL20(2)             <---------ARR14(2)                <---------AHL20(2)              --------->ARR14(2)       <---------TOE2(3)             --------->YAB1                  --------->ALFIN1          *TSS             <--------ATHB1                 <-------PIF5           <---------ATHB12             --------->ATHB12               ------->PIF5   <---------LBD16----------->GT1            <---------YAB1                 --------->ZAT2  --------------->AtSPL3 -------YAB1--------->ICU4                 --------->At4g35610--------->ANAC46                     -- --------TGA1<---------ICU4              <-----------RAV1(2) --------->LBD16               <--------- --------HVH21  --------->AHL20(2)    --------->DAG2     --------->ARR14(2)        --------->At4g35610 ---->YAB1  <---------ATHB12         ---------->DOF2     <---------ARR14(2)<------ZmHOX2a(1)     ----   gtcatagcttcacaatgattaaatatatggactaaaccaaaaagcaggtggaacttccatttccgcacaatcactaaggaaaattagctctatatactgt  7935400     --------->ATHB51     <---------ICU4     --------->ATHB12    --------->ICU4    <---------YAB1  -------->ATHB1  <--------HAHB4  <---------ICU4  --------->YAB1 --------->ICU4            ----------->HVH21 <---------ATHB12        ----------->GT1 ------->WOX13(1)     <---------ANAC58          <----------DOF2                                 ----- --GT1                <---------ANAC46     <-----------GT1                                <------ZmHOX2a(1) -------->CBF         <---------ANAC58 ------->TEIL         ---------->DOF2           ---------->DOF2   ccaatcattatttgctcgactatggcctggtgacatatatgtatataactctttctttcaacaaaagaatgaaggaatttttgaaaacaaaaggattgaa  7935500                                                  <----------DOF2                                                <---------MYB46(3)                                               --------->ALFIN1                                            --------->DAG2        <-----------RAV1(2)                --------->DAG2   --------->ANAC58              <---------At4g35610   --------->ANAC46     ------>MYB46(1)   ---------->DOF2   --------->ANAC58     ------>MYB83  <---------ATHB12                                              - ----->DOF2           --------->TOE1(2)--------->YAB1    ----------->GT1                         ----   aagacacgcttcaggcttactcaacctacaatctaagctaatcaaaaaggtggtttatgtggtaactagtcttgagaaaacatatggtctagactctaga  7935600                                                 --------->ATHB12                                                 --------->ATHB51                                                 -------->ATHB1                                                 <---------ICU4                                                --------->AHL20(1)          <---------GLK1(1)                                                <---------YAB1            --------->ZAT14                                                <---------AHL20(2)        <---------ZAT18                                             <---------AHL20(2)      <---------ANAC58          --------->YAB1                     --------->AHL20(2)      <---------ANAC58      --------->AHL20(2)         <---------ATHB12                   --------->AHL20(2)       <---------ANAC46      <---------AHL20(2)         --------->ICU4          <-------GAMYB  --------->ICU4<---------AHL20(2) --------->At4g35610        <---------TOE2(3)       ----------->GT1 <---------ATHB51   <-----------RAV1(1)    --------->AHL20(2)     <---------MYB52(2)      ------------>MYB.PH3(1)        <---------AHL20(2)   <---------At4g35610 --------->LBD16       <---------YAB1    --------->YAB1    --------->AHL20(1)    --------->LBD16 -------->ANAC46     --------->YAB1     <-------TEIL       <---------AHL20(1)   --------->ANAC46 ----->ANAC46       <---------YAB1<---------MYB52(1)      <---------AHL20(2)--------->GLK1(1)   <----   caccgcaactaatgatgtttttatcatgaatagaccgttatattcataaaattattgtatatatattttttgctggtgaactccgctacaaaaaaaattt  7935700                                                            --------->AHL20(2)                             --------->ATHB12             --------->AHL20(2)                         --------->ATHB12   <---------AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  --------->TOE2(3)             <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------AHL20(1)                 <---------AHL20(2)   --------->REM1(1)    <---------YAB1     --------->AHL20(2)                 --------->AHL20(2) -----AHL20(2)         <----------DOF2     <---------AHL20(2)           --------->YAB1  <------ZmHOX2a(1)   aaactacaactcgacatgagaccatctttattgatgggttcttaataaaattcttaacatttttatatacaaaataacaattaaatattaggaggctctt  7935800                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                         <---------ARR11(3)                     <----                                                         --------->ARR11(3)                     <----                                                <---------DAG2                                 ------                                                <----------DOF2          <---------AHL20(2)   <------                      <---------ARR11(3)     <-----------GT1<---------DAG2               <---------AHL20(2)                      --------->GLK1(2)     <-----------GT1 <----------DOF2         --------->AHL20(2)                      --------->ARR11(3)   --------->AHL20(2)   <-----------GT1     <---------AHL20(2)               ------->TEIL            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <---------AHL20(1)      <---------TOE2(3)--------->RVE1(1)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1 --------   aataagttaagaaaatgtatcaaaaatctcttatttaagagccaatttaacttttctaagaacttttttctattttttattcatattttattttatataa  7935900  Previous    Next  AGI:  At1g22480.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G72230.1); similar to unknown [Populus trichocarpa] (GB:ABK92714.1); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 7934151    to: 7935371    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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