Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <-----------GT1                                                                <-----------GT1                                  <---------AHL20(2)         --------->YAB1       ----------->GT1          <-----------GT1         <---------AHL20(1)      --------->TOE2(3)      <---------ARR11(3)      <----------DOF2     <---------ANAC46               <---------ICU4          --------->ARR11(3) -----------GT1       <---------YAB1                 --------->AHL20(2)      ---------->DOF2 ---WOX13(1) <----------DOF2      --------->AHL20(2) <---------AHL20(2)--------->ZAT6           <----   aattacatcttttttctttatattcttatcgtataaaaaatttagtttttcagaattaaacattaataacttaacaatacaaagatgtcaaaaaaaaaac  7911600                                                     --------->GLK1(2)                                          <---------AHL20(2)               --------->ARR14(2)        <---------AHL20(1)               <---------ARR11(3)        --------->AHL20(1)        --------->YAB1              <---------CCA1(2)          <---------AHL20(2)     --------->YAB1            ------>MYB83                 --------->AHL20(2)   --------->AHL20(2)         <---------YAB1            ------>MYB46(1)     <-------MYC3         --------->ARR11(3)              --------->YAB1 <---------YAB1--------->ARR11(3)----------->GT1     <---------ARR11(3)             <---------YAB1 -----ICU4<---------MYB59       ------->MYC3         <-----------ARR10            --------->YAB1   attacaattcgacctaatatcttcaatttcgacacatgtaaaataaaatttgaaaaatcttcgttttaataagaaaaacttgttttataatacaattgag  7911700                                                      --------->RAP2.6(2)                                                    <---------At4g35610                                                   --------->MYB52(2)                                                   <---------DOF5.7(2)                                                 <---------MYB52(1)                                                --------->TOE2(3)                                                --------->TOE1(3)                                              --------->SPL7                                             ------>MYB46(1)                                             --------->MYB52(1)                                           --------->DEAR3(1)                                           <---------MYB46(2)                              --------->ARR14(2)                         --------->ICU4    <---------MYB52(2)                              <---------ARR14(2)                --------->DAG2     <---------GLK1(2)--------->At4g35610                  --------->LBD16               ---------->DOF2     <---------ICU4--------->DOF5.7(2)                   <---------LBD16          <---------AHL20(1)    --------->YAB1------->TEIL                       --------->At4g35610          --------->AHL20(1)   <---------YAB1------>MYB83---------->DOF2        ------->TEIL        <          --------->AHL20(2) --------->YAB1--------->MYB46(3)                --------->ANAC46 <------          <---------AHL20(2)<---------YAB1--------->ANAC46                   --------->ANAC58 -------     <---------ATHB12    <---------YAB1 <-----------GT1<------NtERF2         --------->ANAC58<-------TEIL   tctccaaatcaataaaataaagtatacatgattataagaatttcaccgaacgttagcggcaaagacatgcccattcaacacgaagctaaaccggatacgt  7911800                     <-------GAMYB                  <---------LBD16            --------->ANAC58            --------->TGA1a            <---------TGA1a            --------->O2            <---------O2            <---------ANAC55(2)            --------->ANAC58                                                                      ---            ================================================MYC_MYB                               ---            =================MYC_MYB                                                              ---            --------->ANAC46                                                                      ---            --------->ANAC55(1)                                                            ----------      <---------ANAC46                                                                     <---------      <---------ANAC55(2)                      --------->ARR14(2)                     --------->YAB1 ---------YAB1--------->DOF5.7(2)              <-----------ARR10                      <--------ATHB1- ---ANAC55(2) <---------MYB52(1)   --------->YAB1  -------->P--------->MYB46(3)      <---------ATHB12 -->ANAC55(2)<-----------HVH21  <---------AtLEC2  <-----------GT1                    <---------ATHB51   ttttgattacggacacgttagccggttatcgtttgaatgaaaattgacaaatctacccttctaacaatcgcaaacatggaattaccaataatacccttac  7911900          -------->P          ------>MYB83          ------>MYB46(1)         --------->MYB55(1)                                 <---------ALFIN1        <---------MYB46(2)                                  --------->AtMYB61        <---------MYB111(2)                              --------->AtMYB61        <---------MYB59                                  <---------ALFIN1        <---------MYB111(1)                             --------->MYB46(3)       <---------ANAC55(2)                            <---------ALFIN1     <-----------GT1                               --------->ANAC46 ------>ANAC58                                    --------->MYB46(3) ------>ANAC46                                   ------>MYB46(1) -------->GT1                                    ------>MYB83 ------>ANAC58          ----------->RAV1(1)    --------->MYB46(3)             ----------->TBP ----->AGL15           --------->MYB46(3)      <---------MYB46(2)       <---------ANAC58         ---- ------AGL15--------->AtMYB61                 --------->ANAC46          <---------ANAC58         <--- -------->AHL20(2)  --------->REM1(1)   <<<<<<<<<TBF1 --------->AtMYB61 <---------ANAC46  <---------GLK1(2)   aagtaaattacctaccacaactacaacaacacattagccttcttcttcaccaaacaccaccaccatctccgatttcgtttataaaaccctcaaattctca  7912000                                                               ----------------->AGL1                                                               ----------------->AG                                                              ----------------->AGL2                                                            ------>MYB83                 <---------ANAC46                           ------>MYB46(1)           <---------TOE2(2)                      --------->TOE2(3)           <---------TOE1(2)                      --------->TOE1(3)                              <---          <-----------RAV1(2)                     --------->YAB1                            <--------   --------->ZAT6<---------ANAC55(1)            --------->ARR11(3)                          <--------   <---------ALFIN1   <-----------GT1           <---------ARR11(3)                      <---------AHL20(2) ----->At4g35610 <---------ANAC58  *TSS    ---------->ID1 --------->AtMYB61   --------->YAB1--------- ------At4g35610 <---------ANAC58  <---------ALFIN1    --------->ZAT6--------->YAB1 <----------DOF2   tctcaacacttctcaggtttcgtgtaacatttcacacacacatttgtcgaaatcttaacaccaatcccaaatcagaaaaatcaaaactttttattttatt  7912100                                                                          ------>MYB46(1)        <---                                                                          ------>MYB83           ----                                                                        --------->AtMYB61        ----                                                                        <---------MYB59       -------                                                                        ------->GAMYB    ------>NtERF2                                                                    <---------WRKY12    --------->RAP2.3(3)                                                                   --------->WRKY18(1)  --------->RAP2.3(2)                                                                  <-----------HVH21     --------->DEAR3(1)                                                                 --------->DEAR3(1)    --------->RAP2.3(1)                                               <---------ATHB12  --------->DREB2C(2)  <---------ATERF1(1)                                           <---------WRKY38(1)<---------ALFIN1        ------>NtERF2         <---------ANAC46                  <---------WRKY12   ------->GAMYB           --------->LBD16    <---------ICU4                       <-----------HVH21    --------->AtMYB61      --------->ANAC46 --------->YAB1                          <--------ZAP1       <---------MYB55(2)      --------->DEAR3(1) ------AHL20(2)                     --------->YAB1          -------->P --------->MYB46(3)<---------ATERF1(1) -AHL20(1)                         <---------YAB1          --------->WOX13(1)      <---------ATERF1(1) -AHL20(2)                       --------->WOX13(1)    --------->YAB1--------->WOX13(1)--------->ORA47(2) >AHL20(2)     <---------YAB1 ------->TEIL--------->WRKY18(1)--------->MYB46(3)    ------>ZmHOX2a(1)<   ttatcaaaatggcgcttatgaatggaagcatgaatctatcatcggtcaaatcatcgatgatcaaccaccgtcaaccaaacttctcctccgccgtctccag  7912200                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                     ------>NtERF2                                                                     <---------ATERF1(1)                                                                    <---------DEAR3(1)                                                                    ----------->HVH21                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                   --------->RAP2.3(1)                                                                  <---------RAP2.6(1)                                                                  <---------RRTF1(1)                                                                  <---------DEAR4(2)                                                                  <---------ERF1                                                                  <---------ATERF1(1)                                                                  <---------ORA47(2)                                                                  <---------RAP2.3(1)                                                                 <---------DEAR3(1)                                                                 <---------RAP2.3(2)                                                                 --------->ATERF1(2)                                                                --------->ATERF1(1)                                                                --------->At4g35610                                                                <---------At4g35610                       --------->AtLEC2                         <------NtERF2                     --------->DEAR3(1)                         <---------ABI4(1)                     <---------ANAC58                          <---------RRTF1(1)                     <---------ANAC58                          <---------RAP2.3(1)                   ------>NtERF2                               <---------ERF1                   --------->LBD16                             ------>NtERF2              <---------GLK1(1)                                <---------DEAR3(2)              --------->GLK1(1)                                <---------ORA47(2)              <------ZmHOX2a(2)                               <---------DREB2C(2)             <---------ARR14(3)                               <---------At1g77200             --------->ARR11(3)                               <---------DEAR3(1)             --------->ARR14(2)                               <---------DEAR4(1)             <---------AGP1                                   <---------RAP2.3(3)             --------->ARR14(3)                              <------NtERF2             <---------ARR14(2)                              --------->ATERF1(1)             <-----------ARR10                              ------>NtERF2            <---------ARR14(1)                              <---------ATERF1(1)            <---------CCA1(2)                              --------->DEAR3(1)          --------->HSFB2a(2)                              <---------DEAR3(1)             <---------DOF5.7(2)          <---------HSFB2a(2) --------->DEAR3(1)        <---------DEAR3(1)       --------->LBD16         <---------LBD16     --------->DEAR3(2)        <---------At4g35610 ------>NtERF2 --------->WRKY12      <----------DOF2<---------ANAC46         <---------ZAT2<-----------HVH21    ------>NtERF2 ------>MYB46(1)  --------->DEAR3(1)          --------->At4g35610<---------ATERF1(2)     --------->WRKY45 ------>MYB83<---------ARR11(1)               --------->ZAT2<---------SPL7 <---------ATERF1(1) ------ARR14(2)   --------->ANAC46            <---------At4g35610--------->DEAR3(1)      --------->WRKY38(1) ----->PCF2--------->LBD16   --------->MYB46(3)    <----------DOF2------>NtERF2<---------LBD16      < ----->ARR14(2)------>ZmHOX2a(2)              ----------->RAV1(2)<---------RAP2.3(3)    --------->DOF5.7(2) -->HSFB2a(2)<---------ARR11(3) ------>MYB83<-----------RAV1(2)<---------ATERF1(1)  <---------DOF5.7(2) ---------ALFIN1 <---------LBD16------>MYB46(1)  --------->At4g35610--------->DEAR3(1) --------->TOE2(3)   acccacttctttccggatctccgccgtgcaaaccgacccaaaaacaccagctgcttcatcggcgtcggcggcgacgacgactccggcaacgttgacgaag  7912300                                                                                                   --                                                                                                   <-                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                              ----------------->AGL3                                 --------->At4g35610                   --------->LBD16             <-                                 <---------At4g35610                -------->P----------------->AGL2                    ----------->GT1                                 --------->MYB52(1) --------->ZAT2                  ---------->DOF2<------NtERF2                    --------->MYB46(3)   <---------ZAT2           <-----------RAV1(1)  ----------->RAV1(1)   ---------->DOF2 ------->GAMYB    <---------At4g35610 <---------MYB52(1) <---------TOE2(3)     --------->ALFIN1 <----------DOF2  <---------ARR14(2)<------ -------GAMYB--------->ALFIN1 --------->ZAT18  <------ZmHOX2a(1) <---------At4g35610   --------->At4g35610   cccgttggagttaatgtgggtaaaggaaaatgggcaccagagagttggaggacgaagaaagctttacagcaaccggactatccagatttagctgcgcttg  7912400                                                                                                   --                                  ------>ZmHOX2a(2)                                        ----------                            ------>ZmHOX2a(1)<------NtERF2                     --------->ANAC46    --                            =============HOX2a_HOX2a       <---------ANAC58    --------->ANAC58    <-                      <----------DOF2       --------->LBD16<---------ANAC58    --------->ANAC58 <---- ------->At4g35610  --------->HSFC1(2)     --------->DEAR3(1)    <------ZmHOX2a(1)       <---------ANAC46 --------At4g35610  <---------HSFC1(2)    <---------LBD16  <---------ANAC46<------ZmHOX2a(1)    <---- --------ZAT2  <------ZmHOX2a(2) <------ZmHOX2a(2)      <---------WOX13(1)<----------ID1--------->MYB55(2) ----DOF2      ====================HOX2a_HOX2a   --------->GLK1(2)   --------->ATHB12   <---------MYB46(3)   aagctgtgctagagacgatcgaagcttttcctccgatcgtgttcgccggagaagctagattgcttgaggaacgattaggacaagcagcgatgggtgaagc  7912500  Previous    Next  AGI:  At1g22410.1    Description:  2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative. similar to DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE), 3-deoxy-7-phosphoheptulonate synthase [Arabidopsis thaliana] (TAIR:AT4G33510.1); similar to DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1), 3-deoxy-7-phosphoheptulonate synthase [Arabidopsis thaliana] (TAIR:AT4G39980.1); similar to DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE) [Arabidopsis thaliana] (TAIR:AT4G33510.2); similar to unknown [Populus trichocarpa] (GB:ABK94974.1); similar to putative 3-d Range:  from: 7912035    to: 7914992    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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