Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->O2                                                                      --------->ANAC58                                                                      <---------O2                                                                      <---------TGA1a                                                                      --------->ANAC58                                                                      --------->TGA1a                                                                   ----------->HVH21                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                 ---------                                                          --------->CCA1(2)                 <--------                                                         <---------AGP1                    <---------LBD16                                                         <---------ARR14(2)        --------->MYB52(2)                                                         <---------ARR11(3)        <---------MYB46(3)                          --------->ZAT14                --------->ARR11(3)      <---------MYB52(1) -              ---------->ID1                             --------->ARR14(2)    <---------ANAC46   <--          ------>ZmHOX2a(1)     <---------YAB1           --------->AGP1------>NtERF2     <---------REM1(2)     ------>ZmHOX2a(1)   <----------DOF2                <---------GLK1(1)      <---------ANAC58   <-- -------ARR11(3)       ------>ZmHOX2a(1)                --------->GLK1(1)      <---------ANAC58  ----   gctcttcctctccttcgtcttcttcctctttactctgattcgaatcgacattgaacagagatctgagaagcgacgcgacttgcgtttgttcttcacggga  7883300                                                      --------->ANAC58                    <------NtERF2                     --------->ANAC58                    ------>NtERF2                    --------->ZAT18                   <---------RAP2.3(1)               ------>NtERF2                   --------->LBD16       <-------GAMYB<------NtERF2                  <---------ANAC46      <---------MYB46(3)                  <---------DEAR3(1)    --------->MYB55(2)      ----------->HVH21             <---------O2   --------->HSFC1(2)       <---------ZAT18             --------->O2   <---------HSFB2a(1)     <---------ANAC46                             ----             <---------bZIP60(2)       --------->ALFIN1         --------->ARR14(2)              <----             <---------TGA1a--------->HSFB2a(1)     <---------ANAC58                            -----             <---------ANAC58      <---------LBD16 --------->ATERF1(1)                        <------             <---------ANAC58 --------->ARR14(2)  <---------ATERF1(1)                         -------             ====================================MYC_MYB       --------->ATERF1(1)        -------->P            <---------TOE2(3) <---------ARR14(2) --------->ALFIN1                         --------->MYB52(1) >ANAC46  ----------->HVH21 <---------HSFC1(2)   <---------DEAR3(1)                   ------>NtERF2 -LBD16   ----------->TGA1<------ZmHOX2a(1)  <---------ANAC46  <------NtERF2          --------->LBD16 -------->GLK1(2) <---------RRTF1(2)   <---------AtMYB61      --------->LBD16        <---------RAP2.6(2) -------HSFB2a(1) <---------RAP2.6(2) <---------MYB52(1)     <---------ANAC46     --------->ARR14(2) -------HSFC1(2)  <---------RAP2.3(2)--------->LBD16<---------ANAC58----------->GT1 <---------LBD16 ------->ARR10   <---------LBD16  ------>ZmHOX2a(1)<------NtERF2<---------ARR14(2)<---------ARR14(2)   agaatcgtctctctgacgttgcggcgaaggaggttcctccggtggttgagggtggcgcgcaaggcggagacggagaaatgtctgtttccggctaccagcg  7883400                                                             <---------ANAC46                                                          <---------DEAR3(1)                                                         --------->At4g35610                                                         <---------At4g35610                                                         --------->ATERF1(1)                                                      <------NtERF2                              <-----------HVH21       --------->ATERF1(1)        --------->MYB52(1) <---------ANAC58        <---------LBD16 --------->ATHB12          <---------ANAC58      --------->DEAR3(1) -->NtERF2              <----------DOF2          <---------ATERF1(2) -----ZAT18            ------>ZmHOX2a(2)         --------->ATERF1(2) ---->ZAT14          <---------ARR11(3)         --------->DEAR3(2)   --------->At4g35610 ---At4g35610        --------->ARR11(3)       <---------ALFIN1    --------->CCA1(2)            ------ -->At4g35610     <------ZmHOX2a(2)      <---------ATERF1(1)<------NtERF2                      <-----   gactcattgaaaacggagcgatcgatctttggtgtcaaatcgtcgtctccaccggcggaagcggcgagagacgctgaagaagatggagatagagaagaac  7883500                                                              <---------At4g35610                                                              --------->At4g35610                                                            <---------RAP2.6(2)                                                           <-------TEIL                                                          --------->GLK1(2)                                                         --------->ARR11(1)                                                       ----------->ARR10                                                       --------->ICU4                                                     ---------->DOF2                                                  ------->GAMYB                                                --------->RAP2.6(3)                               <--                                                <---------At5g28300                        <------ZmHOX2a(1)                              ---------->DOF2  --------->MYB52(1)                      --------->DEAR3(1)                   ----------->HVH21    <---------ARR14(2)--------->CCA1(2)         <---------ALFIN1                   <---------YAB1       --------->ARR14(2)--------->ARR14(1)    <---------ZAT2    <--        --------->ZAT18  <----------ID1<---------CCA1(2) --------->ARR14(2)     --------->At4g35610 --->ZAT14      <---------ARR14(2)   --------->ANAC55(2) <---------GLK1(2)      <---------At4g35610 ----ZAT14    ----------->ARR10      <---------ANAC55(2) <---------ARR14(2)     --------->ZAT2    <--   actgagagagagcgcgaagttctgactgggacaaaagacgcgtatcgattaacggcaaagattcggctgataaacgattaccagctccaccgaggaagtt  7883600                                                   <-----------TGA1                                                  --------->ANAC55(2)                                                  --------->ANAC46                                                  --------->ANAC55(1)                                                  <---------ANAC55(2)                                                  =====================================bZIP_DOF                                                  <---------O2                                                  --------->ANAC58                                                  --------->ANAC58                                                  --------->O2                                                  --------->TGA1a                                             --------->ZAT14                                           --------->LBD16                                           --------->At5g28300                                          <---------ANAC46                                         <------NtERF2                                        <---------RAP2.6(3)                                        ------>NtERF2  --------->At4g35610                                       --------->DEAR3(1)                                       <---------ATERF1(2)                                       --------->ATERF1(2)         <---------At5g28300          --------->ATERF1(1)--------->ANAC58      <-------GAMYB                <--------P--------->REM1(2)--------->MYB52(1)     <---------MYB46(3)            =========================MYC_MYB    <--------P                    <-------GAMYB   --------->bZIP60(2)   <-------GAMYB                  ==========================MYC_MYB  --------->MYB55(2) <-----------HVH21<---------RAP2.6(2)--------->ANAC46  <---------MYB46(3)--------->DEAR3(1)--------->RAP2.3(1)--------->ANAC58 <---------AtMYB61<---------At5g28300----------------------->TaNAC69(2)  --------->YAB1*TSS ---------RAV1(1)<---------WRKY38(1) <---------ATERF1(1) --------->RAP2.6(2)---------->DOF2 <-------- -------AtMYB61 ----------->HVH21<---------MYB46(3)<-----------HVH21 <------NtERF2    <---------ARR14(2) -------YAB1   <-----------HVH21<---------TOE2(3) <---------TGA1a <---------LBD16 <-------TEIL   atggtggttgttaccgaggtcaccgtcgtccatggaggttgccgccgtgaacacgtcagacgcaaaacggcggaatcaaaaagatgcaaattccgataac  7883700                                                             ------------>CBF                                                         --------------->AtSPL8                                                       <---------MYB52(1)                                                     <------MYB83                     ------------>CBF                                                     <------MYB46(1)     --------->AHL20(2)     -----                                                    --------->MYB59   --------->WOX13(1)        <----                                           <---------DAG2<---------------AtSPL8----------->GT1 ------    <---------ZAT18                        <----------DOF2  <-----------GT1<-----------GT1  --------- -MYB52(1)  <----------DOF2 ----------->ARR10     <---------MYB52(1)------------>CBF<-----------GT1<-   ttccagtgccttctcttttgctctctcgcttagactcgctcttagcttttcggttcggttttgtacaattttcaattaaaccggttataccaattgattt  7883800                                                                               --------->TOE2(3)                                                                               <----------DOF2        <---------At4g35610                                                 --------->ARR11(3) ---->AHL20(2)                                                          <-----------GT1 -----AHL20(2)                                                      <---------ARR11(3) --->AHL20(2)                            <---------YAB1             --------->AHL20(2) >ATHB12--------->At4g35610    ---------->DOF2<---------AHL20(2)  --------->ANAC58 --------WOX13(1)  ---------->ID1      <-----------GT1            --------->ANAC58              <----   aattgaattgagctcatatttgtagtttttttataaagaaattactatttttttttttttttgtcatcaagaaattactatctttaaaatgttgatattt  7883900            ----------->GT1       <---------HSFB2a(2)       --------->HSFB2a(2)       --------->HSFC1(1)                                                 ------->TEIL      <---------LBD16                                                  <---------YAB1            <---  <----------DOF2                       <----------DOF2              --------->YAB1  <---------YAB1 -----AHL20(2)                        ------>ZmHOX2a(1)   --------->AHL20(2)     <---------ARR14(2)   gattcttttctggaatgaaaaaaaaaaaaaaaaaaaactcctcttttgtttgactaagaaataaatccctctcatgaatgtcgaattctgatttgatttg  7884000                                             <-------MYC3                                             ------->PIF4                                             ------->MYC2                                             <-------PIF4                                             ------->MYC3                                             <-------PIF5                                             ------->MYC4                                             <-------MYC4                                             ------->PIF5                                             <-------MYC2------->GAMYB                                            <---------TGA1a                                            --------->ANAC58                                            --------->ANAC58                                            <---------ANAC55(2)                                            ----------->GT1                              --------->MYB52(1)         --------->ANAC46                         =============================bZIP_DOF                                  <----                   <-------GAMYB            --------->ANAC55(2)                                 <----                   ===================================MYC_MYB                                   <----                  ----------->GT1     ---------->DOF2 <-----------GT1                     <---------YAB1            <---------ICU4--------->DAG2    --------->TGA1a                               --------->AHL20(2)     <---------TOE2(3)   ---------->DOF2    =====================MYC_MYB                  <---------AHL20(2) ------AtLEC2     --------->LBD16     ================bZIP_DOF                     ------->TEIL <----   caagattaatgtaatcttgccggttaaaaaagtaactgagtaaagcacgtgaaatttaaccgaaactttggtattcacaagtatgaacatatataattgc  7884100        <<<<<<<ZML2 <---------ZAT18                      --------->ARR14(2)     --------->HSFB2a(2) ------->GAMYB                   <---------ARR14(2)     <---------HSFB2a(2)--------->MYB46(3)       --------->ATHB12 -----ANAC46        --------->ZAT14             <---------YAB1 -----ANAC58        <---------ZAT14         --------->ALFIN1                               <--------- -----ANAC58    <---------ICU4             --------->REM1(2)                               ---------- -----AtLEC2   <---------YAB1             --------->ALFIN1              ----------->GT1--------->YAB1   atgtaatctagaacatgatcagtgcaatcgccaaataagaaaccgtgtggatgattgtagatactagatagaaatagtaaatgggcctataatgggtcaa  7884200  Previous    Next  AGI:  At1g22310.1    Description:  MBD8 (methyl-CpG-binding domain 8). similar to unnamed protein product [Vitis vinifera] (GB:CAO61713.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Methyl-CpG DNA binding; (InterPro:IPR001739); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 7881526    to: 7883687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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