Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <----------DOF2    ------>ZmHOX2a(2)   <------ZmHOX2a(2)                 <---------AHL20(2)  --------->ARR11(3)          --------->ARR11(3)  <---------ARR14(2)          <---------AGP1  --------->ARR14(2)          --------->AGP1  <---------ARR11(3)          <---------ARR11(3) ----->ARR14(2)               <---------ARR14(2)                               --------->AHL20(2) ------ARR14(2)              <---------CCA1(2)                             <---------AHL20(2) <------ZmHOX2a(2) ---->CCA1(1)      <---------HSFB2a(2)                   <-------TEIL----------->GT1     --------->CCA1(2) -----GLK1(1)      --------->HSFB2a(2)        --------->AtLEC2----------->RAV1(1)     <---------YAB1 ---->RVE1(1)  <---------ANAC58 ------>ZmHOX2a(2)       --------->CCA1(2)  --------->AHL20(2)<------- >AHL20(2)     <---------ANAC58<------ZmHOX2a(2)       --------->ARR11(1) --------->AHL20(2) --------   atccgatctttgaatttgcttccaaaaacgtagatctatttcattttcatgctaagagattcgacaacagtaagtataaaattatatcaagataagatca  7880800                                                                          ------->GAMYB                                                                         --------->MYB46(3)                                                                       --------->MYB52(1)                                    --------->AHL20(2)              <---------ANAC55(2)                        --------->AHL20(2)   <-----------HVH21      --------->ANAC55(2)                      --------->TOE2(3)  ---------->DOF2            --------->ANAC58                   ----------->RAV1(1)<---------ANAC55(2)           --------->ANAC58           <---------ARR14(2)   --------->AHL20(2)               <------ZmHOX2a(2)           <-----------ARR10    <---------ARR11(3)              --------->AGP1 --ARR11(3)--------->ARR14(2) --------->ANAC58              ----------------->AGL1                --- ->ARR11(3)--------->GLK1(2)  --------->ANAC58         ---------->DOF2 <-----------GT1           ----   agagtgatcagagtatctaaacaacattaaacaagaaattacttaaaggtcgcatctaaaagtccagatcaagtaacagcccagaaacatacaaatcggt  7880900                                                               <---------RVE1(1)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------ARR11(3)                                                         <---------ARR14(2)              --------->GLK1(2)                          --------->ARR11(3)       ---------->DOF2   ----------->GT1             ---------->DOF2 ------>DAG2  --------->ARR11(3)                    --------->AHL20(2)                <---------ICU4 ------>DOF2  <---------ARR11(3)           ------>ZmHOX2a(2)  <---------GLK1(2)      <---------ATHB12   aaagggctacaaagaaaatctatggaaatgtaaaaacaatttcgatcggagcaataaaagatcggattttttcagaaacatgaacaaatcattttctgaa  7881000             ----------->GT1            ----------->GT1         <---------GLK1(1)         --------->GLK1(1)      --------->LBD16     <---------HSFB2a(2)     --------->HSFB2a(2)   --------->CCA1(2)   <------ZmHOX2a(2)                 <---------MYB52(1)  --------->ARR14(2)           <----------DOF2  <---------ARR14(2)        ------->TEIL  <---------LBD16  --------->ARR11(3)        <---------ARR11(1)  <---------ARR11(3)        <---------ARR14(2)            --------->ANAC58  --------->AGP1            --------->ARR14(2)            --------->ANAC58                         << --------->GLK1(1)         <---------ARR14(1)    <---------At4g35610 <---------DAG2              <--- <---------GLK1(1)         <---------CCA1(2)     --------->At4g35610 <----------DOF2           <-----   tagagatccagaaatcggaaaataccatcgtatctttcggtttgctcggagagcttagccaagtaaacctgcttttccctctcattctccatagtttttt  7881100                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                 <---        <<<<<<<<<TBF1                                                 --------->ATHB12           <---     <<<<<<<<<TBF1                                                  <---------WOX13(1)           ----  <<<<<<<<<TBF1                                                   --------->ATHB12          --------- <<<<<<<TBF1  <<<<<<<<<TBF1                                      <---------YAB1           --------->ZAT6 ---------------------ANAC81                 --------->YAB1  --------->ATHB12           <-----------GT1 ------GT1 <<<<<<<<<TBF1          --------->ZAT14         <----------DOF2   --------->HSFB2a(2) <----   cttcttcttcttcttcttcttccttctctgtctctctgaagtctgaatcaaaaatggatgctttgatttgattgatttcgagattagtagtaaccctagg  7881200                                    <----------DOF2        *TSS                        --------------->AGL15    --------->YAB1                  <---------------AGL15 ------>ZmHOX2a(1)              ------>ZmHOX2a(2) ---->ZmHOX2a(2)              --------->ARR11(3) ----ZmHOX2a(2)               --------->ARR14(2)                                         ----------->RAV1(1) ----->ARR11(3)               <---------ARR11(3)                                  --------->DAG2 ------ARR14(2)               <---------AGP1                                     ---------->DOF2 ------ARR11(3)               <---------ARR14(2)                              --------->YAB1 ----->ARR14(2)           <---------MYB52(1)                              <---------AHL20(2)  <------ >TOE1(2)<---------ZAT6 <---------MYB46(3)    <---------WRKY38(1)         --------->AHL20(2)--------- --ZmHOX2a(1)   <---------AHL20(2)  <---------DAG2            --------->YAB1  --------->AHL20(2)   atcctctcatagtggtattatatcagccgttggatctactttttttagtcaacaaaactcagaaacataagttttataaattataaagtagccacaaagg  7881300                                                                             <---------DOF5.7(2)                                                                      ---------->DOF2----------->HVH21                                                                  <---------ANAC55(2)--------->WRKY12                                                                 <---------TOE2(3)   --------->WRKY38(1)                    <---------MYB59                             --------->MYB52(1) <---------At4g35610                    --------->TOE2(3)                --------->AGP1--------->TOE2(3)<----------CDC5                    --------->TOE1(3)                <---------ARR14(2)      --------->MYB52(1)                  ------->TEIL                       --------->ARR14(2)    --------->DOF5.7(2)  ----- ---TOE2(3)  ---------->DOF2            <---------YAB1<------ZmHOX2a(2) --------->DAG2------>NtERF2 ->DOF2   --------->ANAC46     <---------AHL20(1)  --------->LBD16----------->GT1  --------->At4g35610   tttagtttttacacagaaagaacctaaaactaatatatgtttcttattaaaccccgatctagtcaataacgtaaaaggttaacgacgctgaccgtgataa  7881400                                <---------TOE2(3)                                 <---------AHL20(2)                             <---------AHL20(2)                                 <---------RVE1(1)                           <---------YAB1                                      <---------GLK1(2)                         --------->AHL20(2)                   --------->ZAT6   --------->ARR11(3)                         --------->ATHB51               <---------AHL20(2)--------->YAB1            <   ---------->DOF2      <---------MYB52(1)   <----------DOF2<-----------GT1    <---------ARR11(3)   - ---->MYB52(1) ------>ZmHOX2a(1)<---------TOE1(3)      --------->AHL20(2)<---------ATHB12    --------   acggagaaagacatgtcctcttgtccattattttaagggtttgtgttcttttctatattatataacacaatccaaatcatagattttttttatgccaatc  7881500                 <---------ATHB12               --------->WOX13(1)      <---------ARR14(2)      --------->ARR14(2) ---------ARR14(2)      <---------WOX13(1)                           <-----------HVH21             -- -------->ARR14(2)--------->YAB1             <----------DOF2  <------MYB46(1)               <-------- ->WOX13(1)  <---------ATHB12    ---------->DOF2              <------MYB83          <---------AtLEC2   caaatccaaatccaaatcaatcacagattgaaactcaaagaaattttcttttgaagaaaaaatttggtttctgtcaaatgttttgtacatggccctttca  7881600                 <---------At4g35610                 --------->At4g35610             ----------------------->TaNAC69(2)          <---------MYB52(1)     --------->ARR14(2)      <----------DOF2     <---------ARR11(3)   --------->ANAC58     --------->ARR11(3)   --------->ANAC58          --------->GLK1(2)     <---------ARR14(2) <---------ALFIN1          <---------AHL20(2)                              <--    <---------CCA1(2)--------->REM1(1)           --------->AHL20(2)                      ---------->DOF2 ------->GLK1(2)--------->MYB59        <---------AtLEC2                             --------->LBD16 --DOF2  ------>ZmHOX2a(1)--------->ANAC46--------->AHL20(2)--------------->AGL15  <-----------RAV1(2)   aattctatatcctgtagttagctacaacacgcttttagtttgcataaaatataaaatctgaactagaatgagaaaacaatttgttccaggtaaaagaaat  7881700  Previous    Next  AGI:  At1g22300.1    Description:  GRF10 (GENERAL REGULATORY FACTOR 10); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 epsilon (GRF10) [Arabidopsis Thaliana] (GB:P48347;GB:Q9LME5); similar to GRF11 (General regulatory factor 11) [Arabidopsis thaliana] (TAIR:AT1G34760.2); similar to 14-3-3-like protein [Gossypium hirsutum] (GB:ABD63905.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 7878758    to: 7881208    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g22310.1    Description:  MBD8 (methyl-CpG-binding domain 8). similar to unnamed protein product [Vitis vinifera] (GB:CAO61713.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Methyl-CpG DNA binding; (InterPro:IPR001739); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 7881526    to: 7883687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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