Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <----------DOF2                                                                       --------->AHL20(1) ------->CCA1(2)                    --------->ARR11(3)                                    --------->AHL20(2) --------GLK1(1)                    --------->AHL20(1)                                    <---------AHL20(2) ------->GLK1(1)                    <---------ARR11(3)                                   --------->AHL20(2) ------->ARR14(1)                   <---------AHL20(1)                                   <---------AHL20(2) -------ARR11(3)                 --------->AHL20(2)           <---------WOX13(1)     --------->AHL20(2) ------>ARR11(1)              ----------->GT1               --------->ATHB12       --------->TOE1(3) -------ARR14(2)   <---------AHL20(2)                      <---------AHL20(2)      --------->TOE2(3) ------>ARR14(2)   --------->AHL20(2)                  <---------AHL20(2)          <----------DOF2 ------>ARR11(3)   --------->AHL20(1)            <----------DOF2                <-----------GT1 ------>ARR10 --------->AHL20(2) <---------AHL20(2)   <---------AHL20(2)     --------->YAB1         -   gatatgcttttgttcttaaaataaaatacgaatattaaaatattcaaatttctttttttatttgattgaaaacgtccacttataactttaaataatttgg  7852700                            ----------->GT1                         --------->YAB1                     <---------------AGL15                     --------------->AGL15                                                    -------                    ----------------->AGL3                                                   --------                    ----------------->AG                                                  --------->YAB1                    ----------------->AGL1                                                <---------AHL20(2)              --------->CCA1(2)                        <---------AHL20(2)                 --------->AHL20(2)             --------->ARR11(3)            <-----------ARR10                     --------->WRKY38(1)             <---------ARR11(3)  --------->ICU4       --------->AHL20(2)         --------->WRKY12   <---------YAB1   <-----------------AGL3 <---------ARR11(3)                  --------->At4g35610 <---------At4g35610<-----------------AGL2 --------->GLK1(2)                   <-------GAMYB--------- -------->GLK1(2)   ----------------->AGL2 --------->ARR11(3)                  <---------At4g35610   gtaatctgattcagagatatatgccaaaaatagtaagaatgagaaaatctagcccatttaatcgcatagtctattcaattcagttgacttaataaaaagt  7852800                                                                    <---------ARR11(3)                                      ----------->GT1               --------->ARR11(3) ---->GT1                           ---------->DOF2              --------->YAB1                ------ ->DAG2     --------->YAB1---------->DOF2                    <---------AHL20(2)           --------->TOE2(3) ->DOF2     --------->TOE2(3)  ---------->DOF2              --------->AHL20(2)            --------->TOE1(3)   tacaaaaacatttatcttaatcacttactaaagaaaagaaaagaaaaaaaaacacacagaaattttataagaacttctgttaacaaaacaaaccttaaca  7852900                                            <---------CCA1(2)                                       --------->At4g35610                      --------->TOE2(3)                                       <---------At4g35610              --------->YAB1                                     --------->ZAT18                    --------->AHL20(2)                                     <---------ZAT18               ------------>CBF              ----                        <----------DOF2<---------ZAT2        --------->AtLEC2   --------->TOE1(3)---- --->ZAT6  <----------DOF2      <---------MYB52(1)     --------->MYB46(3)    <-----------GT1     <---   ctcccttcattctctttgctctctccctttctccattagtgagctcgtctctcatcaaacaccatgaaaaacaattaaaaaaccttatattctgacaaat  7853000                                                                              ----------->GT1                                                                         <---------YAB1                                                                       <---------ICU4              <-                                                                       -------->HAHB4              --   <---------ANAC55(2)                                                 --------->YAB1           XXXXX   --------->ANAC55(2)                                                 --------->ATHB12         <----  <-------TEIL                                                        --------->ICU4         -------- ----->AHL20(2)                        <---------YAB1                 <---------YAB1         <------- ----->AHL20(1)         ------>ZmHOX2a(1)                          --------->ICU4            -------- ------AHL20(2)        --------->TOE2(3) <-----------TBP          --------->ARR11(3)         <-------   aaaatacatattttgttctgtttctccttagtctctgtgtgatttttgtagaataaacgagaaacagagataatgatgagaggtgaatttggagaagctt  7853100   <----------DOF2                                                        <---------ICU4 --------CCA1(2)                                                       <--------HAHB4 -------->ID1                                                          --------->YAB1 XXXXXXXXXXXXXXX>MIR783                                                <---------ICU4 ---TEIL                               <---------ALFIN1               --------->ICU4              <-- ->HSFC1(2)                         --------->ARR14(2)                <---------ATHB12--------->LBD16 --HSFB2a(1)                        <---------ARR14(2)           --------->YAB1 <----------DOF2   --- ->HSFB2a(1)             ------>ZmHOX2a(1)              <---------TOE1(2)--------->ICU4<---------MYB52(1) --HSFC1(2)     ------>ZmHOX2a(1)--------->YAB1  --------->ARR14(2)   <---------YAB1<---------LBD16   cgtctctttcacgttctccttcttctcctcttcaaacagaaccacatccccaatctcccaagttttatcgtaatcattatgtcttttccggtgatcactc  7853200                                                                                              <------                                                                                            ---------                                                                                           <------MYB83                                                                                           <---------MYB46(3)                                                                                           <------MYB46(1)                                                                                           <---------HSFB2a(1)                --------->MYB111(1)                                                        --------->HSFB2a(1)                --------->MYB59--------->GLK1(1)                                           <---------HSFC1(2)               <--------P     --------->ARR14(2)                                           --------->HSFC1(2)            --------->HSFB2a(2)<---------GLK1(1)                                  ----------->RAV1(2)            <---------HSFB2a(2)<------ZmHOX2a(2)                                  <---------At4g35610 -------At4g35610<------MYB83 <---------ARR14(2)                <---------------AGL15   <------ZmHOX2a(1) ------>At4g35610<------MYB46(1)------>ZmHOX2a(2) <----------DOF2        <--------P   <---------TOE2(3)   atcttacaacagttcgagtaggttctgtctccgatctccgtctgattactcgctttcgagttatttctcaaacgggttgtgttcttctgaggatggttcg  7853300                  --------->ANAC46                                                               <---                <---------ALFIN1                              --------->MYB59               <--------              ------>ZmHOX2a(1)          <---------YAB1  --------->ATHB12               <---------YAB1    <---------ZAT18       <---------ANAC58              <---------YAB1                --------->At4g35610   <---------MYB52(1)     <---------ANAC58         <---------MYB46(3)               ------>ZmHOX2a(2) -TEIL       --------->ANAC46          --------->YAB1   --------->ICU4            <---------ARR11(3) -------------->TaNAC69(2)<---------ANAC46     <---------AtMYB61                  --------->ARR11(3)   tctcagttcgcttctcctccactcgatggcttgatgaccaagtataattttggtggtgatgatttaggtctatgcgaaagtttcgatcttctgaatgttg  7853400                      ------>MYB46(1)                                 <---------ARR14(2)         --------->ANAC58                                             --------->ARR14(2)         --------->ANAC58      <------ZmHOX2a(1)     <---------At4g35610    <----------ID1    ------>MYB83   <---------ARR14(2) --------->MYB52(1) ------HSFB2a(2)    <---------MYB111(2)             ------->TEIL--------->ALFIN1 ---RAV1(1)         <---------MYB46(2)        --------->ICU4    <---------AtMYB61                 >>>   gagaagaagacaagactcatcaccaaactcagaggagcagttttggtaactatgaagctaatggagatggtggattccgatattactctggttttggagt  7853500                                    --------->LBD16                                    --------->DAG2                                  --------->TOE1(2)                                   ---------->DOF2         <------ZmHOX2a(2)      --------->ARR14(2)                            <-------TEIL        <---------ARR11(3)      --------->GLK1(2)                           <---------MYB52(1)        --------->ARR11(3)      <---------ARR14(2)                         --------->LBD16       <------ZmHOX2a(1)       <---------GLK1(2)                          <---------HSFB2a(2)   ---------->DOF2   --------------->AGL15       <---------REM1(1)        --------->HSFB2a(2) >>>>>>>WRKY26       <---------------AGL15       ----------->GT1         <---------LBD16     --------   tgatcaaaaggatcatcaaatttctaattcttggaatctgggaatgcagagttgtaacatgaacaattactctgttccggtacatggaaaaagcggtgtt  7853600  Previous    Next  AGI:  At1g22240.1    Description:  APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding. similar to APUM7 (ARABIDOPSIS PUMILIO 7), RNA binding [Arabidopsis thaliana] (TAIR:AT1G78160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61728.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Pumilio RNA-binding region; (InterPro:IPR001313); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 7853073    to: 7854952    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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