Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AHL20(2)    <---------AHL20(2)     <---------AHL20(2)    --------->AHL20(2)    --------->AHL20(2)   <---------AHL20(2) --------->AHL20(2)   --------->AHL20(2) <---------AHL20(2)                                                           <-  <---------YAB1   --------->AHL20(2)                                                            <--- ------->GT1       <---------AHL20(2)                            <----------DOF2               <----- ----ANAC58       --------->AHL20(2)            --------->YAB1   <---------DAG2                <----- ----ANAC46       <---------AHL20(2)   <---------MYB52(1)     <-----------GT1<---------YAB1 <-------- ----ANAC58     --------->YAB1       --------->TOE2(3)       --------->AHL20(2)        --------->YAB1   tgttattaatttatcgaatattaatttataaaatttctaccgtaatgtaatcaaaaaccaaaattaacttttcgtcgtgatttttgtaatcaaatttccg  7846200                                                          <---------AHL20(2)                                                    --------->YAB1                                           --------->AHL20(1)                                           --------->AHL20(2) ---------->ID1                <---------ICU4      <---------YAB1            <---------AHL20(2) --------MYB46(3)        --------->TOE2(3) <---------AHL20(2)              --------->CCA1(2) ------MYB52(1)          --------->ANAC55(2)   --------->AHL20(2)         <---------ARR11(3) ----ANAC58           <---------ZAT14      <---------AHL20(1)             --------->ARR11(3) ----ANAC58      <---------MYB111(1)    --------->YAB1 ----------->GT1---------->DOF2          ------ ---GT1      --------->At5g28300 <----------DOF2<---------AHL20(2) --------->AtLEC2           <------   tttgtcgatttttgcagtaactactatacttaatactttcagtaataaattttatgatagtaaattgacatgaaaagatataaatccactatataagatt  7846300                                                                                --------->YAB1                            <---------MYB52(1)                         <---------ARR14(2)                           --------->LBD16                             --------->ARR14(2)                          <---------HSFB2a(2)                          --------->TCP16(1)                         <-----------------AGL1                        --------->PCF5              <---------ANAC46                                         --------->PCF2               -              <---------ANAC58                ----------->GT1        --------->WRKY12              <-      --------->YAB1     <---------LBD16 <---------ARR11(3)          --------->WRKY38(1)          <--     <---------YAB1      <-----------------AGL2                     --------->ALFIN1     <----------DOF2  <---------AHL20(2)<---------CCA1(1)    --------->ARR11(3)        --------->LBD16 --------->ARR14(2) --->GLK1(2)  <---------ANAC58       ------>ZmHOX2a(2)  <-----------HVH21      <------ZmHOX2a(2)----- ---GLK1(2)<----------DOF2--------->HSFB2a(2) --------->YAB1    <---------At5g28300<---------ARR14(2)   ctattttatgatactttcttggatatttccggtaatggatcgagataatggtaaacaatgtcaaatcaccgtggaccctcgatcaaaaccgcttgaatac  7846400                                                                                                   <-                                                                                                   <-                                                                                        <------NtERF2                                                              ---------->DOF2          --------->LBD16                                                             <---------AHL20(2)       --------->LBD16     ------>ZmHOX2a(2)                                 --------->YAB1                 --------->RAP2.6(2) -------->SPL7                                     <---------YAB1                     <---------ANAC46 --------MYB52(1)            --------->ANAC58    --------->YAB1      <------NtERF2  --------->MYB52(1) -------SPL7                 --------->ANAC58 --------->WOX13(1)  --------->RAP2.6(3)<---------LBD16 ---------->AtSPL3   --------->TOE2(3)    <-----------GT1<---------ZAT6        ------>ZmHOX2a(1)-----   cgttcgatctctccatttgaaaacatcaaacgagcaaattggttttaccaattacaatagtattaaaagacggcaatggtcctacatgccggaaaatgaa  7846500                                                                                                 ----                                                                                                 <---                                <---------DAG2                                                  <<<<<                                <----------DOF2                                                 <----         <------------CBF<---------YAB1                <-----------GT1                          <<<<<       <---------YAB1<---------ANAC58                --------->AHL20(2)                    *TSS <----  <----------DOF2    <---------ANAC46                <---------AHL20(2)               --------->YAB1 ----------GT1       <---------ANAC58      --------->ANAC58                         --------->AtLEC2 --------AHL20(2)   ---------->ID1         --------->ANAC46       <-----------GT1   --------->ANAC58 -->TEIL--------->ATHB12--------->KAN4(2)  --------->ANAC58  <----------DOF2        --------->ANAC58   tttacttttgttattggtttttggcttattcttccttttccaaaaacgcctctatttaaactcctttgttacactctccaaactccaagcataatacaat  7846600        ----------->GT1      ---------->DOF2    --------->ANAC58    --------->ANAC58 ----->YAB1 ------ICU4 <<<<ARR1 -----YAB1                          ---------->DOF2                                                 - <<<<ARR2------------------------>ANAC81                           --------->DAG2            <------- -----ATHB12       ------------------------>ANAC81<----------DOF2---------->DOF2   ------->TEIL -----   catagcaagaaagtgaaacagaagaaaacacagagaaacaaagagactctctcttttttttgtttgcaaaaggttttgtaagatggacgtttttgatgga  7846700                                         --------->TGA1a                                         --------->O2                                         ========================================bZIP_DOF                                         <---------bZIP60(2)                                         ========================================bZIP_DOF                                         <---------ANAC46                                         <---------ANAC55(2)                                         <---------O2                                         ----------->GT1                                         --------->bZIP60(1)                                         <---------bZIP60(1)                                         <---------TGA2(1)                                         --------->TGA2(1)                                         >>>>>>>>>>HY5                                         <---------TGA1a                                      ----------->TGA1                                      ----------->HVH21                  <---------DDF1     <-----------HVH21                 --------->ETT(2)   <---------DEAR3(2)                 <---------ETT(2)   <------MYB83  --------->TOE2(3)          <------ZmHOX2a(2)         <------MYB46(1)  ------>ZmHOX2a(1)                <---------DEAR3(1)           <---------ZAT2  <---------ARR11(3)  ===============HOX2a_HOX2a       <---------DREB2C(2)          --------->ZAT2  --------->ARR11(3)  ----------->HVH21  <---------ARR11(3) ----------->STF1        --------->At4g35610       <---------ANAC58 ---------->RAV1(2)  --------->ARR11(3)<---------TGA2(2)        <---------At4g35610 <-----------GT1 --WOX13(1)--------->YAB1     =====================bZIP_DOF    ------->TEIL ---------->DOF2   ------- -->TEIL  <---------ATHB12    ---------->DOF2     <---------MYB59     <----------DOF2     <---------ANAC58   cttcctgacccgatcatcgtcgacatcttgaacaaagtcggtgacgtcaaaaccttacttcgatgcagctctctttcaaaaagatttaactcgcttgtcc  7846800                                                     <-----------HVH21                                                     <-----------TGA1                                                    --------->O2         <----------DOF2                                                    --------->bZIP60(1) ------>ZmHOX2a(2)                                                    <---------bZIP60(1)<------ZmHOX2a(2)                                     --------->GLK1(2)                --------->ARR14(2)                                <---------ATHB12  <-----------HVH21   <---------ARR14(2)                             <---------ALFIN1<-----------GT1          --------->ARR11(3)                             --------->AtMYB61   --------->ANAC46     <---------ARR11(3)                     ------>NtERF2   --------->ARR14(2)    --------->ANAC58       <-----------HVH21    --------->MYB46(3)  --------->MYB46(3)<-----------GT1  ------->GAMYB<---- --->ID1        --------->MYB46(3)   <---------ARR14(2)    --------->ANAC58     --------->MYB52(1)  <   ctcagtctgagtcactcaccctccgactcgaccactcagtatccgattcacccgtcgtcacaagcattttccgatctttattcaacggtctagtttctct  7846900                                ------>MYB83                              ------->GAMYB                             ----------->HVH21                              <---------ALFIN1                         --------->SPL7                             --------->MYB46(3)                       --------->ARR14(2)                             <---------MYB55(2)                    --------->LBD16                     --------->YAB1                        --------->ARR14(1)         --------->ARR14(2)                    <---------ATHB12                       --------->GLK1(2)          --------->GLK1(2)                   ------>MYB46(1)                        <---------ARR14(2)          <---------ARR14(2)         --------->LBD16   <-----------GT1                --------->ARR14(2)   <---------ARR14(2)       --------->DEAR3(2)  --------->YAB1   <-----------ARR10     <---------LBD16    <---------GLK1(1) ------DOF2        ------>MYB83 ------>MYB46(1)           <---------GLK1(2)    --------->ARR14(2) -----------GT1   --------->WOX13(1)      --------->LBD16 <---------ARR11(3)   <---------GLK1(2)   <-   tttatccaaaccggctaaaccaatcacaataaccaccctctctccgagtctccccttcaagattctctcccggttcgaccggattcgaaatctggacgta  7847000                 ---------->DOF2           <---------DEAR3(1)          <------NtERF2          --------->ATERF1(1)         ------>NtERF2         <---------ATERF1(1)         <---------DEAR4(2)         <---------ORA47(2)         <---------ERF1         <---------RAP2.3(1)        <---------DEAR3(1)        <---------RAP2.3(2)        --------->DEAR3(1)        <---------RAP2.3(3)        <---------ATERF1(2)        --------->ATERF1(2)       <---------ABI4(1)                <---------MYB52(1)       --------->ATERF1(1)             <---------RAP2.6(3)                        --------->TGA2(2)       <------NtERF2                <---------At4g35610                          <-----------HVH21      ------>NtERF2                 ------>NtERF2                                <-----------TGA1      <---------ATERF1(1)         --------->ATERF1(1)                           <---------ANAC46   --      --------->LBD16            --------->At4g35610                           <-------TEIL       <--     --------->ANAC46            <-------TEIL      <---------At4g35610      --------->At4g35610   <--     <---------LBD16            --------->ALFIN1   <---------ZAT2           --------->ZAT2        ---    <---------HSFB2a(2)      --------->DAG2        --------->At4g35610   ---------->DOF2        <----    <---------LBD16        ---------->DOF2         --------->ZAT2    --------->ANAC46           <----    --------->HSFB2a(2) <---------HSFB2a(2)     ---------->DOF2      --------->ANAC58      <---------ANAC58 --------At4g35610      --------->HSFB2a(2)<---------ANAC46          --------->ANAC58      <---------ANAC58   gagcttcccggcggcgatgtaaagctcgagaaaggtgcagccgttaagtggaaagctgagtttgggaaaacactcaaaagctgcgtcatcgtcgcgttcc  7847100  Previous    Next  AGI:  At1g22220.1    Description:  F-box family protein. Identical to F-box protein At1g22220 [Arabidopsis Thaliana] (GB:Q9LM18); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G78100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61736.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7846591    to: 7847791    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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