Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ----------->GT1                         >>>>>>>>>ARR2                 <---------ICU4                  <---------ARR11(3)                       <---------AHL20(2)              --------->ATHB12                --------->ARR11(3)                       <---------YAB1                 <---------YAB1                 ----------->ARR10                 --------->At5g28300       --------->ANAC58        ---------->DOF2   <-------TEIL                ----------->GT1            --------->ANAC58     --------->YAB1      <--------P    <-- ->GT1     <-----------GT1<---------WOX13(1)          --------->ICU4        --------->MYB52(1)  -----   aatacagagatttatacactgtaatttgattgttaattctttggccagaaacagggatgattacaagaataaaggcattaacagaggtagattttagccg  7829900                      <---------TOE2(3)                     --------->YAB1               <---------At4g35610                           ---------->DOF2      ----------->GT1<-----------GT1  <-------TEIL  <---------YAB1             <---------YAB1      -- -------MYB46(3)     --------->MYB52(1)           <----------DOF2      <-------TEIL     <-----------GT1 ---->LBD16   <---------TOE2(3)      --------->CCA1(2)    <---------ANAC55(2)--------->CCA1(2)  -----   tggttaagaagttattaagctaataacgatgttaactagatacaaatgctcgctttgattacttaaaacgaagtacatgatatgatcaaataaccatttc  7830000                                                  --------->ANAC46                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  --------->ANAC58                 ------>ZmHOX2a(2)                                              --------->CCA1(2)                  <---------ARR11(3)                                             --------->ARR11(3)                  --------->ARR11(3)                                             <---------ARR11(3)          ----------->HVH21                                         --------->YAB1                <---------At4g35610 -------->DOF2                         --------->GLK1(2)               ----------->RAV1(2) ---->TOE2(3)                     ---------->DOF2 --------->ANAC58     --------->At4g35610   ttaaagacagaaaacacaaaaacaatacattttttgaaaagaatcaagatttacgcaagacgaactaattcacatctgaccttgatcttactcttagata  7830100                                                     <---------ATHB51                                                     --------->AHL20(2)                                           ----------->GT1                                         ---------->DOF2                     ---------->DOF2 --------->HSFB2a(2)               ---------->DOF2      <---------LBD16  --------->ICU4                   <------ZmHOX2a(2)             --------->YAB1        <---------ZAT2    <---------AHL20(2)              --------->ARR14(2)          --------->WOX13(1)       --------->ZAT2  --------->YAB1                    <---------ARR14(2)         <---------AHL20(2)        ----------->RAV1(2)                            ------>ZmHOX2a(2)         --------->AHL20(2)        --------->At4g35610<---------ICU4             <------ZmHOX2a(2)        <---------ATHB12    --------->KAN4(2)    --------->AHL20(2) --------->At4g35610------>ZmHOX2a(2)   actagaatcaataaatcaaaagttaaagaacatactcacctggaaaagaaaaaaaataattagagtgatcagcgagcgatgcgatcggatcgaatgagtc  7830200                                             <---------ZAT6                                        ------>MYB83                     <---------ATHB12       --------->ARR11(3)               ------>MYB46(1)                --------->WOX13(1)       --------->GLK1(2)               --------->MYB52(1)       *TSS ------------>CBF<----------DOF2  --------->TOE1(3)                   --------->TOE1(2)     ----------->GT1---------->DOF2   --------  --------->TOE2(3)                   --------->AtMYB61 <---------DEAR3(2)--------->YAB1    ---------   aaaacctaaaatctagggtattgaagagcataaattgagaccaacgagtcttaagcgtcggtctgaaaaaaatcaatgaaagtctcgctgtaagaaaagt  7830300                                                          --------->ANAC58                                                          --------->ANAC58                                                         <---------LBD16                                                        <---------ANAC58                                                        <---------bZIP60(2)                                                     ----------->HVH21                                                    ------->MYC3                                                    ------->MYC2                                                    <-------MYC2                                                    <-------MYC3                                                    <-----------HVH21                                                   --------->ANAC55(2)                                                   --------->TGA1a                                                   ==================================bZIP_DOF                                                   --------->ANAC55(1)                                                   --------->ANAC58                                                   <---------ANAC55(2)                                                   --------->O2                          ------------>CBF         <---------O2                        =====================================MYC_MYB                        ------->GAMYB              <---------TGA1a                    ----------->HVH21              --------->bZIP60(2)                   <---------MYB52(2)              --------->ANAC46                  <---------At4g35610          ----------------->PIF3(1)                  --------->At4g35610          --------->CCA1(2)                 ------>NtERF2          --------->ZAT2  <---------ANAC46                        -----   <---------WOX13(1)--------->MYB52(1) <---------ZAT2  <---------ANAC58                      ------>ZmHOX2a(2)  <------------CBF<------NtERF2         <---------At4g35610   <------------CBF          <---------ANAC58 ->DAG2         <---------DEAR3(1)      --------->At4g35610--------->LBD16<----------DOF2   <-------- ->DOF2     <-----------RAV1(2)    <---------YAB1  --------->ANAC58      <---------DAG2 <---------ANAC58   agtagattgatttttcaggcggctaacggacaatgtgatgagagctgagagacacgtgacgcgcgattgagaacaccttttcaaagtatttcttgatcta  7830400                                                                      <---------AHL20(2)                               <---------LBD16                        --------->AHL20(2)                            <-----------GT1                        ----------->GT1           --------                          --------->AHL20(2)               <------MYB83<---------AHL20(2)  <---------                    --------->LBD16            --------->ATHB12   <---------YAB1           --------->MYB52(1) ---->MYB52(1)     <---------LBD16     <-----------GT1     <------MYB46(1)                ----------- -ARR11(3)        <---------LBD16--------->LBD16           ----------->GT1        ----------->HVH21--   acgtcgacttagtgaaatagaccgggaattaaacccggttttgacttcttgatttgatatttggttatatgattaaatgtgaatgtgacggtctaaccgc  7830500                                   --------->At4g35610                                   <---------At4g35610                         --------->ANAC46                         --------->ANAC55(2)                     <---------AHL20(2)                         --------->ANAC58                       --------->AHL20(2)                        <---------TOE1(2)                       <---------AHL20(1)                        --------->SPL7                          --------->AHL20(1)                     --------->TOE1(1)                  ----------->GT1                     --------->TOE2(1)                  <----------ID1                    --------------->AtSPL3             ----------->GT1                    <---------------AtSPL3            --------->DAG2          ------>MYB83<---------SPL7 ------->GAMYB   ---------->DOF2          ------>MYB46(1)--------->ANAC58        <---------------AGL15          -------->P<---------HSFB2a(2)         <-----------------AG --------->MYB59         --------->MYB55(1)        <---------ZAT2--------------->AGL15    ----------->ARR10        --------->MYB46(3)    --------->ANAC58  =====================================================        <---------MYB111(2)   --------->ANAC58  --------->ANAC46<---------AHL20(2) ->MYB46(3)<---------ATHB12   --------->AtLEC2  ----------------->AG <---------TOE2(3) --GT1  <---------MYB46(2)<-----------HVH21     <-----------------AGL1    --------->MYB59       ----- >HVH21 <---------MYB111(1)--------->TGA2(2)    ----------------->AGL1<------MYB83<----------DOF2   - --------->HVH21    --------->HSFB2a(2)         ----------------->AGL2<------MYB46(1)         <------   tctgacattaccaaccatgtttctcgtacgtcatgccaactgcattttatacccaaaaaggaaaaatttattaggttagataagctttttttttttttgt  7830600                                                                                          --------->YAB1       --------->ANAC58                                                                   <--------HAHB4       --------->ANAC58                                                                   <---------ICU4     --------->CCA1(2)                                                                   <---------ATHB12   --------->YAB1                                                                      <-----------GT1  ----------->ARR10                                                                    --------->YAB1  <---------TOE2(3)                --------->AHL20(2)           --------->AHL20(2)     --------->WOX13(1) ===============MADS_MADS          <---------AHL20(2)           <---------AHL20(2)   <---------YAB1 ----->ID1                  <----------DOF2                 <---------AHL20(2)     <---------ICU4 -------------->AGL15    --------->ARR11(3)                 --------->AHL20(2)    --------->ICU4 -----RAV1(1)            <---------ARR11(3)       <-----------GT1                 <---------YAB1-----   tgctaagataagcattttgttatttaagaactttgaattaattgagagttttaaactattttttaatttataagacaatagttgattattaatcattttc  7830700                                                            <---------AHL20(2)                         --------->ATHB12              --------->AHL20(2)                        <---------YAB1                 <---------AHL20(2)              <---------ICU4                          <---------YAB1              --------->ATHB12                     --------->ICU4      --------->ICU4    <---------AHL20(2)<---------------AGL15 ----------->GT1  --------->AHL20(2)    <---------AHL20(2) <---------AHL20(2)         --------->MYB52(1) ---->YAB1   <---------YAB1             --------->AHL20(2) --------->AHL20(2)         <-----------GT1   atattgtaatatttgatcattgaaatattattgaaattgaatttatatttatagttattaattaaatcacatgtgatttcaaacaaattaacaggtctca  7830800  Previous    Next  AGI:  At1g22180.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G08690.1); similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G08690.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61745.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251) Range:  from: 7828317    to: 7830264    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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