Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                           <---------ARR14(2)                                                                                           --------->ARR11(3)                                                                                           --------->ARR14(2)            <------ZmHOX2a(1)                                                          ------>ZmHOX2a(1)           ----------->GT1                                                        <------MYB46(1)     --------->DAG2                                    --------->TOE2(3)          <------MYB83     <-    ---------->DOF2                                   <<<<<<<<<ARR1            <---------ANAC46    -- ------>GLK1(1)                                       <<<<<<<<<ARR2            <---------ANAC58------ >ZAT6    <---------TOE2(3)   ---------->DOF2<----------ID1 ---------->DOF2    <---------ANAC58======   aaatcaaaaagtaaggaaaaacaaaaaaccgtagaagcgataccatagcgacaacaatcttataaagtttttcatcaaattgcttggtcctagtatcctg  7780200                                                                                              <------                                                                                              -------                               <---------ALFIN1                                               <------                            --------->ANAC46                                                  <------NtERF2                          ------>ZmHOX2a(2)                                                 <--------                         --------->GLK1(1)                                                  ---------                         <------ZmHOX2a(2)                                                  <--------                        --------->ARR11(3)                                                 --------->ATERF1(1)                        <---------ARR14(2)                                                <---------- --->RAV1(2)            <---------ARR11(3)                                            --------->ANAC55(2) --------At4g35610      --------->ARR14(2)                                            --------->ANAC46 ------->At4g35610     <------ZmHOX2a(1)                              <----------DOF2<---------LBD16 >ZmHOX2a(1) <-------TEIL<---------GLK1(1)                     --------->MYB52(2)<----------DOF2----- ===============================HOX2a_HOX2a                 <----------DOF2<---------REM1(1)<--------   aagcagccttgtagtttcatagataggatccccccacttgcaagttccatttctcacaagtgctttagttgtctttgctgtagcttttacggagtcagcg  7780300          --------->AHL20(2)   ---------->DOF2                 <---------HSFB2a(2) ---At4g35610               ------->GAMYB       --------->AHL20(2)           --------------->AtSPL8 -->At4g35610             =================================================MYC_MYB ---LBD16 <---------AHL20(2)===============================================MYC_MYB   --------->AHL20(2) ---RAV1(2)               ------>MYB46(1)      <---------AHL20(2)      --------->ARR11(3) ->CDC5<---------ARR11(3) -------->P  --------->ARR14(2)               <---------ARR11(3) -WRKY12--------->CCA1(2) ------>MYB83<---------ARR14(2) ==================bZIP_DOF--------->TOE2(3) -HVH21--------->ARR11(3)<---------ALFIN1--------->TOE1(3)       --------->TGA1a <-------TEIL     --- ---->LBD16             <---------ALFIN1 --------->TOE2(3)       <---------TGA1a ------->TEIL     --- -WRKY38(1)          ---------->ID1--------->HSFB2a(2)   ---------->DOF2<------ZmHOX2a(2)         ---   ggaatgaaagatataaatagtttgtcccaacccgcttgtggaaccttaaataatataaacaaagcacacatgagatcacaatgtacattaaaaacagaaa  7780400                                                 ------>MYB46(1)                                                 ------>MYB83                                                ----------->RAV1(1)         --------->YAB1          --------->ARR11(3)                    --------->MYB52(1)        ------>MYB46(1)          <---------ARR11(3)                --------->ANAC58              --------->MYB52(1)  --------->At4g35610           --------->AHL20(2) ------->GAMYB          ------>MYB83 ------>ANAC46                ----------->GT1  --------->AtMYB61   --------->YAB1     --------->WRKY38(1) ------>ANAC58           ------>ZmHOX2a(1)  --------->ANAC58      <---------ATHB12 --------->ALFIN1 ------>ANAC58      <---------GLK1(1)       --------->ANAC46      <<<<<<<<<ARR2---------->DOF2     <-   acgcagcatcaacatcttattgaactcctcagaagtaaatagttgcacaccaacagcataagaacacaatcaaaccaatcggaaagtgttgacttacatg  7780500                                               --------->At4g35610                                               --------->ZAT2                                     ---                                               <---------ZAT2                                     <--                                       <----------DOF2                                          -----  <---------ANAC58                    <---------ANAC58                                          <----  ----------->GT1                     <---------ANAC58                                        <------  <---------ANAC58            <---------WRKY18(1)                                           ---------  <---------ANAC46            >>>>>>>>>WRKY18  <---------At4g35610                   --------->YAB1 -------P         ---------->DOF2<----------DOF2         <-----------GT1        --------->AHL20(2)---   ggtagcgtgaaactgcaatcgaaagacgaccttgactttggctttctccagcttccatttagccagtctcgacattactcaaaaaaatcaaaacagcttc  7780600                                                                           --------->MYB52(1)                                                                          ------->GAMYB                                                                         --------->MYB46(3)                                                                         <---------MYB52(2)                                                                    ------>NtERF2                                                                    --------->LBD16          <---------ALFIN1                                          --------->ANAC46 -------->RAV1(2)                                                  <---------LBD16 -------At4g35610                                                  --------->ATERF1(2) ---->REM1(1)                                                      <---------HSFB2a(2) -----ALFIN1                                                       <---------ETT(1)      <---------ATHB12 -----HVH21                           <---------ANAC46            <---------LBD16    ------------>CBF >At4g35610                           <---------ANAC58 ------->TEIL--------->HSFB2a(2) --------->WOX13(1) ------>At4g35610                     <---------ANAC58<---------CCA1(2)----------->RAV1(1)--------->YAB1   acctgcaaacacacacatgaaacgagcacagttttcattttcgtgctcatcttcttgtatctatatgttccggcaacaaacagagacttcaatcatagaa  7780700                                                                   --------->ANAC46                                                                --------->ZAT18                                                               <<<<<<<<<GATA-2                                                               <<<<<<<<<GATA-4                                       <---------MYB46(3)      <<<<<<<<<GATA-3                                     <---------ZAT2            <<<<<<<<<GATA-1                                     --------->At4g35610      --------->ARR14(2)                 <---                                     --------->ZAT2           <---------ARR14(2)               ------                                --------->WOX13(1)     <---------GLK1(2)                --------->AHL20(2)                              <---------ATHB12        <---------At4g35610              --------->AHL20(2)                        <------ZmHOX2a(2)             --------->At4g35610--------->TOE2(3)  ---------   <-----------GT1     --------->AGP1<---------At4g35610 --------->At4g35610           <---------AHL20(2)   gaatgaaaccatacatacaaacttagatccaaatcactcagctgttcaaaattttcagatgctgaatccactaaaccacaaactatcaaataaataaccg  7780800                   ------>ZmHOX2a(1)                  <---------MYB59             <---------ICU4             --------->HSFB2a(1)             <---------KAN4(1)            <------ZmHOX2a(2)     --------->MYB46(3)      ====================HOX2a_HOX2a          --------->DAG2      ------>ZmHOX2a(2)           ------------>CBF         --------->ARR14(2)     <---------GLK1(1)           -------->P   ---------->DOF2                                       <    --------->ARR11(3)        <---------MYB52(2)       --------->ARR11(3)                          <-    <---------ARR11(3)--------->ZAT6     <---------------AGL15                                     -- ------TOE2(2)--------->KAN4(2) --------->MYB52(1)     <---------ARR11(3) ---------->DOF2        <--- ->GAMYB    <---------ATHB12------>NtERF2--------------->AGL15 --------->At4g35610               ---- >MYB52(1)  ==============HOX2a_HOX2a   ----------------->AGL3 <---------At4g35610               ----   aggtttgatctccgatcattcctaactctccgactaaccaattccaaaaaaagcgaagacatttctgctaaatggcgaaagagaaacaaaaactagaagt  7780900                                                                                        --------->ANAC55(2)                                                                                        <---------ANAC55(2)                                                                                        ----------->GT1                                                                                        --------->ANAC58                                 --------->MYB46(3)                                     --------->ANAC58                               --------->YAB1                                        <---------ATHB12                              --------->MYB46(3)                                   --------->WOX13(1)          <---------MYB59<------ZmHOX2a(2)                                      <------ZmHOX2a(2)       <-----------GT1  <---------ARR14(2)                                     --------->ARR11(3) ---------ALFIN1        --------->ARR14(2)                                     --------->AGP1 --------ZAT18         --------->At4g35610                                     <---------ARR11(3) ------->ZAT18      ------>ZmHOX2a(1)--------->AtMYB61                        <---------GLK1(1) ------ZAT18 --------->ZAT2   <---------ATHB12                                --------->GLK1(1) ----->PCF2 ------>MYB83--------->AGP1    --------->TOE2(3)           <---------HSFB2a(2)        <--- ----->ZAT18------>MYB46(1) --------->WOX13(1)               --------->At4g35610--------->CCA1(2)<---   gcccacttgttacctagctctcctcagatccaatcaccaccaaaacttaaatccacttgaagcatctaaattctagtaagagatccaatcaagtaacatg  7781000                                    --------->ARR14(2)                                    <---------ARR14(2)                                  --------->LBD16                                 --------------->AGL15                                 <---------------AGL15                                 --------->HSFB2a(2)                        ----------->RAV1(1)              --------->AHL20(1) <---------HSFB2a(2)              --------->AHL20(2)=====================================================================              <---------AHL20(1)----------------->AGL2                              <-----------GT1           --------->YAB1       ----------------->AGL3           <---------------AGL15        -------  --------->TOE2(3)    --------->ANAC46     <---------STY1(2)   <-----------------AGL3 --------------  <---------MYB59    --------->ANAC46       --------->STY1(2)   ===================================== ------ANAC58 <---------AHL20(2)<-----------------AGL2          ----------------->AGL3--------------- ------ANAC58--------->AHL20(2) ----------------->AGL1        ------------------------>ANAC81 -------   cttacctaagctagaataaattcccacaacattttccagatttagtagctagaagaagtgaagaaacccaaaaatggagaacaaaattaccaagtgaagc  7781100  Previous    Next  AGI:  At1g22060.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G22000.1); similar to hypothetical protein OsJ_030029 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15820.1); similar to hypothetical protein OsI_032141 [Oryza sativa (indica cultivar-group)] (GB:EAY78182.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61769.1) Range:  from: 7773052    to: 7780575    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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