Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->AHL20(2)                                <---------YAB1            <---------AHL20(2)                              --------->YAB1          --------->AHL20(2)                              -------->HAHB4<---------AHL20(1)                              <---------ICU4--------->AHL20(2)                             --------->ICU4 <---------AHL20(2)                        <------ZmHOX2a(1)                            <---------AHL20(2)      --------->TOE2(3)                ----------->GT1                          <---------YAB1    --------->AHL20(1)               ----------->GT1 --------                        --------->YAB1     --------->AHL20(2)           --------->HSFB2a(2) =========                   <----------DOF2 ------->TEIL  <-----------GT1        <---------HSFB2a(2) ---------            <----------DOF2--------->YAB1  <---------AHL20(2)     <----------DOF2    <----------ID1   gagtttttgttttcctttcttcttttttataataatgaatgtgaattaaatttacattatttaaattccttttgctggaagattaataggaaaaaaaagc  7710300                              <---------TGA1a                              --------->O2                              <---------O2                                                         --                              --------->TGA1a                                                     <--                              <---------bZIP60(1)                                                 <--                              <---------ANAC58                                                   ----                              --------->bZIP60(1)                                                ----                              <---------ANAC58                                                   <---                              <---------ANAC46                                                -------                              --------->ANAC55(2)                                        <xxxxxxxxxxx                           ----------->HVH21                                             <---------ATHB12                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                          ------>MYB46(1)                   --------->HSFC1(1)                                                   ------>MYB83<     <-------TEIL  <---------HSFB2a(2)                                                <xxxxxxxxxxxxxx ->DAG2            <---------HSFC1(1)                                                 <---------MYB59 =======================================bZIP_DOF                     <---------TOE2(3)<xxxxxxxxxxxxxx ->DOF2            --------->HSFB2a(2)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   gataacatccatacattacttcgagaaacttgacgtgagaacaataaacaacatcgtataagaagtggattaacatatatatggagaaccaaacaatgag  7710400                                                                                 --------->DAG2                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               ---------->DOF2                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                       <---------ALFIN1                                                                      <------NtERF2  <---------ARR11(3)                                                                      --------->ATERF1(1)                                                                     <---------ORA47(2)                                                                     --------->RAP2.6(2)                                                                     <---------RAP2.3(1)                                                                     ------>NtERF2----------->GT1                                                                     <---------ATERF1(1)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    <---------RAP2.3(2)                                                                    <---------RAP2.3(3)                                                                    <---------DEAR3(1)                                                                <-----------RAV1(2)  --------->ARR11(3)              ----------->GT1                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------YAB1                                      <---------ANAC58  --------->ANAC58<---------ANAC58 ---->ZmHOX2a(2)                         <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------RVE1(1)                      <------ZmHOX2a(1)   <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ----ZmHOX2a(2)                 <---------DAG2           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----->ARR11(3)                 <----------DOF2          <---------AtLEC2<-----------RAV1(2)        < ----->AGP1  ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ATERF1(2)    <---------ANAC58 ------ARR11(3)              <---------ALFIN1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxx -->YAB1<---------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ATERF1(2)  xxxxxxxxxxxx xxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->RAP2.6(3)  <----------DOF2 ----------DOF2    ---------->DOF2   <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(s)<------ xxxxxxxxsmallRNA(fl3)     <---------ALFIN1-------->P    <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxsmallRNA(fl3)  --------->AtMYB61xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   atcttttgtgattataggttaaaaagaccacacactttaggaaacaacctgcaaaatttgcttgtaccaggcggcacaggcaaaaggtatctttcttgac  7710500                                                                <-----------GT1                                             <---------YAB1    <-----------GT1           <---------ZAT14                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           --------->ZAT14            ------>ZmHOX2a(1)  <---------ANAC46  <-----------RAV1(1)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxsmallRNA(fl3)<---------ZAT14 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               xxxxxxxxxxxxxxxxx ----------DOF2 --------->ZAT14 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             <---------MYB46(3) xxxxxxxxxxxxsmallRNA(si3)     --------->ANAC58          <---------ANAC58  --------->ANAC58 xxxx>smallRNA(i)              --------->ANAC58          <---------ANAC58  --------->ANAC58 ---WRKY18(1)<---------ANAC46  --------->ANAC46    <------ZmHOX2a(1)  <----------DOF2          ------   cactttgttgttgttcagtgcaaagttttttgcaagcatcctcgcacattataggagtagcgtttttaacttctttcaagcattggtttgagacacaatg  7710600                                                          ---------->DOF2                                                       --------->ANAC58                                                       --------->ANAC58                                                     <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46-------->HAHB4                                                <---------ICU4       <---------ICU4                                                --------->ATHB12     --------->YAB1                                               <---------YAB1       <---------YAB1 <---------TOE1(2)                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     ------>ZmHOX2a(2)                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <------ZmHOX2a(2)               --------->TOE2(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <---------ARR11(3)            <---------AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        --------->ARR11(3) xxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       --------->ICU4 <---------TOE2(2) --->ICU4   <-----------GT1    xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   tttaatacacatatttacattattcgaatgtgagatttgtgccgaaaacatcattgcgagcaaagttgtaatgatcagaagatcgcatgttttcttcaaa  7710700                ------->TEIL             ----------->GT1          --------->ICU4           --------->ATHB12      ------>NtERF2               <---------YAB1                                 <------------CBF     >>>>>>>>>AtERF-3             --------->ICU4                               <---------YAB1     >>>>>>>>>AtERF-4           <------------CBF                            --------->ICU4    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    <---------YAB1   --------->ZAT2  --------->AHL20(2)               <---------YAB1     <------MYB46(1)   <---------ZAT2  <---------AHL20(2)   <----------ID1            --------->ATHB12   --------->At4g35610        --------->ARR11(3) <---------YAB1  <---------YAB1------->TEIL   <---------At4g35610    <------------CBF       <---------AHL20(2)    <------MYB83             <----   ctttgagctgccataatgtatataaatgtattgatattgattagaacaaatattattagtaaacaagatgatttggtgatgaatattgggttttgtttag  7710800                                        <------MYB83                                <---------HSFB2a(2)                          --------------->AGL15                          <---------------AGL15            ---------->DOF2     --------->HSFB2a(2)                          <-------TEIL          <---------ZAT6  ------>ZmHOX2a(1)                      --------->HSFB2a(2)   <-----------TBP       <-----------------AGL3                  <---------HSFB2a(2)   --------->AHL20(2)    ----------------->AGL2    <------------CBF      <-------TEIL               <   <---------AHL20(2)    ----------------->AGL3  <---------YAB1  <---------HSFC1(1)           <------ -----At4g35610    --------->ICU4       <------MYB46(1)    <----------DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   atgatttatatagtgaaagtaatgtttcctatttttagaagttggttttttgttattgtttctttctctagaagttacatacatctctgtgatttagtgt  7710900                                                                                        xxxxxxxxxxxxx                                                                                 --------->TGA2(2)                                                                               --------->bZIP60(1)                                                                               --------->ANAC58                                                                               --------->bZIP60(2)                                                                               --------->ANAC58                                                                               <---------bZIP60(1)                                                                               --------->REM1(1)                  <------------CBF                                             --------->ANAC46               <----------DOF2                                --------->AHL20(2)<-----------HVH21               <---------DAG2         --------->YAB1          <---------AHL20(2)<-----------TGA1      ------>ZmHOX2a(2)          ------------>CBF      <-----------GT1         <---------ANAC55(2) ---------At4g35610           --------->AHL20(2)<---------AHL20(2)             --------->ANAC55(2) ---ZAT6 --------->ANAC46<---------YAB1         --------->AHL20(2)     <------------CBFxxxxxxxxxxxxxx   tacgctgatccaaacaactttattgttatgaataaaacaataactatcgtttaaatgttacaaattaaactcaaattggctacgtcatagtggaacttaa  7711000                                                      --------->AHL20(2)         --------->ARR11(3)                                                  --------->AHL20(2)             --------->GLK1(2)                    --------->ANAC58            --------->TOE2(3) <---------ANAC58     <-------TEIL   --------->ANAC58       --------->YAB1         <---------ANAC58             ------ xxxxxxxxxx>smallRNA(se3)           <-----------GT1   --------->YAB1             <---------ARR11(3)<- xxxxxxxxx>smallRNA(s2)            --------->AHL20(2) <---------AHL20(2)   --------->AtLEC2<---------   ttcgaggttcaagtcgttttgaacgaaaaccatgaaattaactaaacataacttaattatatgttcttacttgttccatacaaaatctatttttaacaaa  7711100                                                                                                   --                                                                                               xxxxxx                                                         ----------->GT1                <---------ANAC58                         <---------ANAC58         --------->YAB1                        <---------AtLEC2 ---->DOF2               <---------ANAC58   <---------ARR11(3)--------->ICU4            <---------ANAC58 -----ZmHOX2a(1)        ---------->ID1  --------->ZAT6  --------->DAG2     ---------->DOF2<xxxxxxxxxx --GT1        ---------->DOF2         <-----------GT1  ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   aggatgcaatgtctctaaaagtatttgtcgtttgtatgtataacagtatctctcatgaaaagtaataactaagtgctaaaagactctattgcatggttta  7711200  Previous    Next  AGI:  At1g21925.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21928.1) Range:  from: 7710412    to: 7710714    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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