Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------At4g35610                                  <---------ZAT14                              <---------ARR14(2)                           --------->DAG2                       --------->YAB1                         <----------DOF2                    ------>ZmHOX2a(1)                   <-----------GT1            --------->AHL20(2)                   ----------------->AGL3            <---------------AtSPL3        <---------AHL20(1)                   <-----------------AGL3     <---------At4g35610         --------->ANAC46               <---------MYB46(3) --------->ZAT14  --------->ARR14(2)   <---------ALFIN1              <---------AtMYB61   --------->At4g35610--------------->AtSPL8        <---------AHL20(2)           --------->ICU4---------->DOF2      --------->At4g35610 <---------WOX13(1)           <-----           <---------AtMYB61  --------->ARR14(2)   <---------ARR14(2)  ------>ZmHOX2a(2)  ---------->ID1   gtccctcgaggtaatggtggtcctataaaaaggttctgcagagcatttagctggatttgtaccgcttaattgatccacattacaaaaaatttgtctcctt  7677800                                                                                 <---------ICU4                                                                              --------->HSFB2a(2)                                                                              --------->YAB1    -----                                                                              --------->TOE2(3)<-----                      <---------YAB1                                    ------>ZmHOX2a(1)   <--------                    --------->YAB1            <------ZmHOX2a(2)     <-----------GT1 <---------AHL20(2)                <---------AHL20(2)            =================================HOX2a_HOX2a  ---------               --------->AHL20(1)           --------->WOX13(1)      ------->TEIL --------->ATHB51 -----DOF2     <---------AHL20(1)        ------->TEIL            --------->ANAC55(2)--------->AHL20(2)   tctctatgcataagttatatatttatgattttttgtatcaatgtatcgatcaatatttcaagtatttatgtatccttcttccataattttttatctttaa  7677900               --------->LBD16                  <-----------TBP              --------->ANAC46                  <---------AHL20(2)              --------->ANAC58                <-----------TBP      <---------ANAC46                    --------->AHL20(2)      <---------ANAC58                    <---------AHL20(2)      <---------ANAC58                --------->ATHB51    <---------AHL20(2)                --------->AHL20(2)    <-----------GT1    ----------->GT1<---------AHL20(2)               ----------->GT1 <---------ICU4----------->GT1        <---------ICU4           ------->GAMYB                    <---- ------->CBF  --------->ANAC58       --------->ICU4          --------->At4g35610                ----- ------GT1   <---------LBD16   --------->GLK1(2)--------->AHL20(2)  <------------CBF           <----- --DOF2    --------->ARR14(2)  <---------ARR11(3)          --------->MYB46(3)         --------->YAB1 >TOE2(3)  <---------ARR14(2)  --------->ARR11(3)     --------->ANAC55(2)   <---------ANAC46<--------   caatatttacttgtatacggaaaatttgttaaaaatctaattatttatatttatatatgtaacaactgaaaattggtaacttgtataagcataatttatg  7678000                          --------->ANAC46                          --------->ANAC58                          --------->ANAC55(1)                          --------->ANAC58                         <---------LBD16         <---------ARR14(2)         --------->ARR14(2)                          <---------GLK1(1)      --------->YAB1   <---------REM1(2)             <---------ARR14(2)      <---------MYB52(1) -----At4g35610        <---------ZAT14               --------->GLK1(1)     ----------->GT1          < ---->At4g35610        --------->ZAT14        ---------->DOF2           --------->ARR14(2)          - ------RAV1(1)     <-----------GT1        <----------ID1                <---------ARR14(2)    ------- -AHL20(2)        --------->AHL20(2)  ---------->DOF2--------->ARR14(2) ------------>MYB.PH3(1)   <--   ctgcataaacatatttgcatttaactacacggaaacttactaaagagaaaaagagaattctcgcatataaaacagaaccgttactctgtttctcttggcg  7678100                                                                ------>ZmHOX2a(1)                                                              --------->HSFB2a(1)                                                              <---------HSFB2a(1)                                                              <---------HSFC1(2)                                                              --------->HSFC1(2)                                          ---------->DOF2     ------>ZmHOX2a(2)      <---------TOE1(3)                  ============================HOX2a_HOX2a      <---------TOE2(3)                  ------>ZmHOX2a(1)  <---------ARR14(2) ---------AHL20(2)          <------------CBF                --------->ARR14(2) -------->AHL20(2)         <---------AtLEC2 <---------TOE2(3)<------ZmHOX2a(2)                     <- --->ID1              <----------DOF2    ===========================HOX2a_HOX2a           <---------ATHB12 --------DOF2     <-----------GT1  <---------ALFIN1   <----------DOF2----------->HVH21    -----------   ctttaattagggtttcttatttagcttttgcattgccacattcctaaaggtttcatcttttggatccttctctgactcacttcttaaaacccatcaatgg  7678200                                               <---------GLK1(2)                                         <---------MYB52(1)                                    ------>ZmHOX2a(2)                                   --------->GLK1(1)                   --------->TOE2(3)                                   <------ZmHOX2a(2)                 <---------TOE1(3)                 <---------WRKY12  <---------GLK1(1)                 <---------TOE2(3)            <--               <-----------HVH21  <---------ARR14(2)                <-----------GT1               ---              <---------bZIP60(1) <---------ARR11(3)             <----------DOF2     <---------ICU4              <---------ANAC46    <---------AGP1              ----------->GT1        --------->YAB1 -              --------->bZIP60(1) --------->AGP1              <---------ANAC46      <---------YAB1<--              <---------ANAC58    --------->ARR11(3)         <------NtERF2          --------->ICU4<--              <---------ANAC58    --------->ARR14(2)       --------->ALFIN1       --------->YAB1  --- -----ZmHOX2a(1)<------NtERF2    <---------At4g35610       <---------ANAC46      <---------YAB1   --- ->CBF   <-----------RAV1(1)     <---------CCA1(2)      <-----------RAV1(1) <---------ZAT6   --------   aggaaggaagtctgtggcgtcaatggactatgttcagatctctgttatcgattcttcaatggtggggttttaacgttactgttatcatcatgaacaaatg  7678300                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                                 <---------------AtSPL8     <---------TOE1(3)                                                           --------------->AtSPL8     <---------TOE2(3)                                                           --------->MYB59 <----------DOF2                                                   ------>ZmHOX2a(2) -------ARR11(3)                   ---------->DOF2               <---------ARR14(2)         <-------- ------>ARR11(3)                 <---------YAB1       --------->MYB52(2)         --------------->AtSPL3 ----->ZmHOX2a(2)               --------->TOE2(3)    <---------TOE1(2)         >>>>>>>>>SARD1 -------ARR14(2)               --------->YAB1       <---------MYB52(1)         >>>>>>>>>CBP60g -------AGP1                   <--------HAHB4     <---------ANAC58--------->At4g35610       <-------- ---->TEIL                    <---------YAB1      <---------ANAC58<---------At4g35610   <----------DOF2 ------>ARR14(2)         <----------DOF2       <----------DOF2   --------->ARR14(2)    <---------DAG2 ->MYB52(1)  ---------->DOF2--------->YAB1    <---------DAG2 <---------At4g35610 <---------------AtSPL3   gatctttcaggtttaaaaagtctcttacttttatcattaaagacttagcctttcgtttgttttatctgatctgcgtttgaaatttggtacctttccttgt  7678400                           <---------YAB1    --------->GLK1(2) <---------------AGL15   --------->ARR14(2) --------------->AGL15                                      ---------->DOF2   <---------ARR14(2)----------------->AGL3                --------->ATHB12    <---------YAB1       - -ANAC58   <---------GLK1(1)                          <-------TEIL          <---------YAB1   -------- -ANAC58   --------->GLK1(1)     <-------TEIL     <---------TOE1(2)   <-------TEIL       ---------->DOF2   ttgcagaaactggatttcaagtttccattatcagtttcatgtgttcatttcatatgttcgtcgattggagcatacattgtgattaaagtcttaaagctta  7678500                                      <---------ARR11(3)                           <------MYB83                   --------->LBD16    <---------ARR14(2)                  --------->HSFB2a(2) --------->ARR11(3)                  <-----------RAV1(2) --------->ARR14(2)                 ===========================HOX2a_HOX2a            <--------P     <------MYB46(1)            <---------WOX13(1)     <---------------------WRI1           <-------GAMYB --------->CCA1(2)         <---------YAB1 --------->ARR14(2) >>>>>>>>>>>>>>>>>LFY         <---------TOE2(3)--------->MYB111(2)                                              <---------ZAT6     >>>>>>>>>ARR2<---------HSFB2a(2)<------ZmHOX2a(1)                              <---------KAN4(2)    --------->ATHB12    <---------ARR14(2)<-----------GT1                      <---------LBD16   <---------YAB1------>ZmHOX2a(2)<------ZmHOX2a(1)                           <---------ANAC46     <- -------->TOE2(3)========================HOX2a_HOX2a                       <-----------RAV1(1)    --- ->TOE1(3)<---------MYB46(3) --------->ALFIN1    <-----------HVH21   <---------YAB1 ---------->TaMYB80   aacctttgattgtggttgatccagaagataggtggaggaggatttttccaatgtcatttgtgttctgtatcaacattgtgttggggaatattagtcttag  7678600                                             ----------->RAV1(1)                                          ------>ZmHOX2a(1)                                        ----------->RAV1(2)                                        ====================RAV                             ---------                                        =================RAV         <---------TOE2(3)     --------->DAG2        <---------CCA1(2)        <----------DOF2          <---------TOE1(3)          <---------------AGL15      ------>ZmHOX2a(1)       <---------ARR11(1)          <---------TOE2(3)   --------->GLK1(2)    <- ------TEIL <----------DOF2   --------->ARR11(3)----------->RAV1(1)  <---------TOE1(3)    ---------->DOF2 ------>CCA1(2)              <---------CCA1(2) --------->MYB46(3)    <---------YAB1  --------------->AGL15   atacattcctgtctcttttatgcagactatcaaatctttaactcctgcaacaacaggtttagggtttttttaagattgagaatttttcaaaataaagtga  7678700  Previous    Next  AGI:  At1g21866.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21864.1) Range:  from: 7677488    to: 7677948    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21870.1    Description:  glucose-6-phosphate/phosphate translocator-related. similar to glucose-6-phosphate/phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT1G77610.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67423.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 7678197    to: 7679686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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