Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------AHL20(2)                           --------->ANAC58             <---------MYB52(1)  --------->AHL20(2)                                                 <   <---------ANAC58        --------->ANAC46             <---------AtLEC2           <---------YAB1  --   <-------GAMYB----------->GT1 --------->AHL20(2)      <---------ANAC58       <----------DOF2     <-   <---------ANAC58        --------->ANAC58             <---------ANAC58       <---------DAG2     <--  <---------MYB46(3)      --------->LBD16     <---------AHL20(2)  <---------AHL20(2) <---------AtLEC2   tagatggttgcctcagttttgttaattccacgaaaaaaatttcgatgttttattttttgcatgactattttttttgtaaaactttatgcatgactaagtt  7666000                                                                             <-----------GT1                                                                         --------->AHL20(1)                                                                         <---------ARR11(3)         -                                                                         <---------AHL20(1)       <--       ------->TEIL                                                      --------->ARR11(3)       <--      <---------CCA1(2)                                               <---------AHL20(2)         <<<< ---------AHL20(2)             --------->AHL20(2)                     --------->AHL20(2)         <<<< ------->AHL20(2)          <---------YAB1                       --------->TOE1(3)               <---- --------AHL20(2)          ------>ZmHOX2a(1)                    --------->TOE2(3)               <---- -------YAB1               --------->ICU4                     <---------At5g28300    <-----------GT1<   attaatttgtatctacttaattcatcgtccttattaaacaagcgtttatgtgaacaaaaacatttaccctaaaaaaatatttcgatttaactaaactagg  7666100        --------->ARR11(3)        ------>ZmHOX2a(2)        <---------ARR11(3)       <---------RVE1(1)        --------->AHL20(1)       <------ZmHOX2a(2)       --------->AHL20(2)       <---------AGP1 -------->At4g35610    <---------MYB46(3) -------WRKY12         ----------->GT1 -------WRKY38(1)    <---------MYB52(1) <<<<<<WRKY11     <---------YAB1--------->AGP1 <<<<<<WRKY6 --------->ANAC55(2)<---------ARR11(3)                    ---------->ID1 -------HVH21--------->ANAC46   --------->ARR11(3)           <-----------GT1                     ---- ----ZAP1   <-------TEIL       <---------CCA1(2)             --------->YAB1           <-------TEIL<-- ---------At4g35610--------->ATHB12<----------DOF2---------->DOF2   <-----------RAV1(1)       -------   tcaactcaaatatatacataaccattggttattagatcttttgagtcttctccaaagacttaataaccatttgtcgcgataacatcgatacatcaagaat  7666200                  <---------ICU4                  --------->YAB1               <---------ICU4               --------->YAB1       <---------ANAC58                                         <---------AHL20(2)       <---------ANAC46                                         --------->AHL20(2)       <---------ANAC58                                        --------->AHL20(2)       ------->GAMYB ----->YAB1   <---------ATHB12                                <---------YAB1          --------->At4g35610 -------AHL20(2) <---------YAB1                          <----------DOF2            --------->MYB46(3) -->YAB1      --------->ICU4 <---------ICU4    --------->MYB46(3)             ---------->DOF2 -------   aaaaatgtgacttgaaatcatcatcaaacaactattacaaaacttattaacaaacaaaacttttattaaaaaaaaaaaaaaaaagaacaactgcaattca  7666300                                                                 <---------MYB52(1)                                                                <-------GAMYB                                                               <---------DEAR3(2)                                                               <------MYB46(1)                                                               <------MYB83                                       <---------MYB46(3)      <---------MYB46(3)                                       <------MYB83           <---------DEAR3(1)                                       <------MYB46(1)       <--------P                  ----------->GT1                                    <---------MYB52(1)       <---------MYB55(1)      <---------ZAT14                            <---------At4g35610             <-----------HVH21        --------->ZAT14                    --------->GLK1(2) --------->MYB59       <---------MYB52(1)       --------->ZAT18             <---------ATHB12  --------->MYB52(1)       --------->MYB52(1)<------MYB83 ------->TEIL       <---------ZAT14      --------->At4g35610    --------->ANAC46       <------MYB46(1)--------->TOE2(3)       --------->ZAT14 --------->WOX13(1)          --------->ANAC58      <---------AtMYB61--------->At5g28300 -->AHL20(2) <<<<<<<<<ARR2--------->YAB1           --------->ANAC58    <---------MYB52(1)--------->TOE1(3)   ataacacagtatacaatcaaacaatctatcagcaaacagtttggttcgcttagacgcaaaccggtcggttatcgtttggtttcgaagtgaaccgtaaaaa  7666400                   <---------YAB1                   --------->ICU4                       --------->ARR11(3)                 --------->YAB1                         <---------ARR11(3)                 <---------ICU4                         <-----------GT1              --------->YAB1                     *TSS  <---------CCA1(2)    <-----------HVH21   -----             --------->AHL20(2)                  <------NtERF2  --------->LBD16                 <----             <---------AHL20(2)              <-----------HVH21  ------>NtERF2                  <-----            --------->AHL20(2)              <---------ANAC58   --------->DEAR3(1)      --------->ZAT14  <---------ATHB12<---------TOE2(3)         <---------ANAC58   --------->ANAC46    --------->GLK1(2)   acaaatcaagttgaattaataatgtttagttccttcttctcgtcttccgtcggagttatatctctccgcctctgtctccgtcgagactctgaagtctata  7666500                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                       ------>NtERF2                                                      <------ZmHOX2a(2)                      --------->DEAR3(1)                                                  <---------RVE1(1)                      --------->ANAC58                     <---------ARR11(3)            <---------ARR14(2)                      --------->ANAC58             --------->ARR14(2)                    --------->ARR11(3)                      --------->ANAC46            ------>ZmHOX2a(1)                      --------->ARR14(2)                    ------>NtERF2                 <---------CCA1(2)     <---------DAG2   <---------AGP1      --------->ZAT6<---------ATERF1(1)      <----------DOF2   <-----------GT1           --------->AGP1 ---->ARR11(3)     ----------->HVH21     --------->DAG2    <---------GLK1(2)             <---------ARR11(3) -----ARR11(3)     --------->ANAC46--------->AtLEC2<---------ARR14(2)   <----------DOF2 <---------CCA1(2) ----CCA1(2)       --------->DEAR3(1)   ---------->DOF2    --------->ARR11(3)  <-----------GT1   <---   tctctctatcactcatcttctccgacgcctctcgttcatccaaaaagctttcctatctgtagatttttcaatccctttttttagcgattcagatctttag  7666600             <------ZmHOX2a(2)          --------->LBD16         --------->HSFB2a(2)         <---------HSFB2a(2)        <---------LBD16      <-----------GT1                          ----------->RAV1(2)   <---------AHL20(2)                          <---------At4g35610 <---------YAB1                             ----------->HVH21                             <XXXXXXXXXX --DOF2<-----------GT1                    --------->At4g35610              <---------AHL20(2) ------GLK1(2)      --------->ATHB12      <---------At4g35610 --------->YAB1     ---------->DOF2   attatttttttcccgatcgatttcattgagcatactctgttttcatctcacctgttcaatggaatcaagactccgaatttatctaaagagtcttgatata  7666700                                    --------->YAB1  <----------DOF2                  <---------YAB1                               <---------WOX13(1)  <---------DAG2               <---------GLK1(2)      <----------DOF2        <---------YAB1  <------- XXXXXXXXXXMIR161.1     <---------ARR11(3)            <---------DAG2 <---------ICU4         ---------   gtcacttttgtatagttttgtttcaatttcttagattatcaaagtttcaaaaatcgcttttttagatcgaaacattgctctgattgtttctctatattaa  7666800                                                                 ----------->RAV1(1)                                                                --------->ANAC58                                                                --------->ANAC58                                                                ----------->HVH21       <---------ANAC58                                       --------->ANAC58       <---------ANAC58                                       --------->ANAC46  <---------ICU4                                         ---------->DOF2  --------->ATHB12                                     --------->ANAC58 <---------YAB1              ---------->DOF2           --------->ANAC58                            <- --AHL20(2)     <-----------GT1       <---------YAB1<----------ID1                --------->ARR11(3) >YAB1 <---------ANAC46 <----------DOF2  <---------WOX13(1)   --------->ANAC58    <---------ARR11(3)   tgcatcattgtgtgtgtttaacttctctttagaaagaggtctcattgatggaagaagacgaaagacgcgacattgttatgtcaagagcttcttcttgtat  7666900  Previous    Next  AGI:  At1g21835.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34800.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34805.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34792.1) Range:  from: 7665653    to: 7665925    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21840.1    Description:  UREF (UREASE ACCESSORY PROTEIN F); nickel ion binding. similar to putative urease accessory protein F [Solanum lycopersicum] (GB:CAC85466.1); contains InterPro domain Urease accessory protein UreF; (InterPro:IPR002639) Range:  from: 7666449    to: 7667747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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