Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ANAC58                                                                                          <------MYB83                                                                                          <------MYB46(1)                                                         --------->YAB1                   <---------ANAC58                                                        --------->HSFC1(2)             <---------MYB52(1)                                                        <---------HSFC1(2)            ------->MYC3                                                <-------TEIL                          <-------MYC3                                               --------->ARR14(2)                    <---------O2     ---------->DOF2                           <---------ARR14(2)                    --------->TGA1a   --------->AtMYB61                           --------->GLK1(2)     --------->ZAT18 --------->O2  --------->ANAC46                             --------->ARR11(3)    <---------ZAT14 <---------TGA1a -------->ANAC46                            <---------TOE2(3) ------>ZmHOX2a(1)    <---------ALFIN1 ----YAB1     ---------->DOF2  <---------At4g35610      <---------HSFB2a(1)   --------->At4g35610 ----GT1   <----------DOF2     --------->At4g35610      --------->HSFB2a(1)  --------->ANAC46 -YAB1 --------->DAG2<------ZmHOX2a(1)      <---------TOE1(3) --------->At4g35610------>NtERF2   atacaccaaaaggctttaaagcaggacttgatcagatgctagacttgaggttcttggaatcatcctctgagtgaaccagacgctgccacgttgggtttcg  7651900                                                                                             <------ZmHOX2a(1)                                                                                         --------->TOE1(2)                      --------->ANAC58              ------------>CBF                     --------->TOE2(2)                      --------->ANAC58            <---------At4g35610                --------->ARR14(2)                      --------->ANAC46     <---------YAB1                            <---------ARR14(2)             ------>ZmHOX2a(1)          --------->ARR14(2)        ---------->DOF2 --------->ANAC58             --------->AtLEC2           <---------ARR14(2)       <------ZmHOX2a(1)--------->ANAC58           <---------ANAC58             --------->GLK1(2)--------->AHL20(2)       --------->ANAC46           <---------ANAC46            <---------GLK1(2) <---------AHL20(2)    <---------ARR14(2)           <---------ANAC58      --------->YAB1   --------->At4g35610          --------->ARR14(2)         <---------ARR14(2)     <---------YAB1 <-------TEIL    <---------TOE2(3) <---------LBD16    -   atgaagaaacgtttcctgcaaaacacgacatattttcataagaatctgattcatctcaattttttgaggaaagaagagatgtatacggaaacgtaggagc  7652000                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                            ---------                                                                                          <---------SPL7                                                                                          <------NtERF2                                                --------->ANAC58                         <---------MYB46(3)                                                <---------ANAC46                         <---------DEAR3(2)                                               --------->ATERF1(1)                      <---------DEAR3(1)                                             <---------DEAR3(1)                        <------NtERF2                                             --------->DEAR3(1)                       ------>NtERF2                                            --------->RAP2.3(1)                       <---------RRTF1(1)                                            <------NtERF2                             <---------ERF1                                            --------->ATERF1(1)                       <---------RAP2.3(1)                                           <---------DEAR4(2)                        <---------RAP2.3(3)                                           <---------RAP2.3(1)                       <---------RRTF1(2)                                --------->ALFIN1--------->ANAC58                     <---------RAP2.3(2)                              <---------ANAC58 <------NtERF2                         <---------RRTF1(3)                              <---------ANAC55(1)                                    <---------RAP2.6(2)                              <---------ANAC46<---------ATERF1(1)                    <---------DEAR3(1)                     <---------ZAT14       <---------ATERF1(1)                       <---------ATERF1(2)              ---------->DOF2 <---------ANAC58------>NtERF2                          --------->ATERF1(2)       --------->ATHB12   <---------At4g35610----------->HVH21                 <----------DOF2  <----      --------->ICU4<---------ZAT6        <---------DEAR3(1)                ------>ZmHOX2a(1)   <---- -------->ALFIN1  *TSS <---------ZAT14---------->DOF2         --------->At4g35610 ----------->HVH21 <   aagtggggatgatggagaaagagtgttcagaggcgtgttcgaaagcggcgacgcatagatgcgaagctaaaccaagtcctgcttttgacggcggtacgaa  7652100           <-------TEIL          <------ZmHOX2a(2)                                                                         -         --------->AGP1                                                                             <         --------->ARR14(2)                                                                         <         <---------ARR14(2)                                               <-----------ARR10         - ----->HSFC1(2)                                                           --------->GLK1(2)         - ------HSFB2a(1)         <---------MYB52(1)                               ------->TEIL              < ------HSFC1(2)         <---------RAP2.6(3)                               <---------ARR11(1)      --- ----->HSFB2a(1)        <-----------TGA1                      --------->YAB1                      --- >SPL7   <---------ARR11(3)                                  <---------YAB1                     ----- -----TOE2(2)        <---------At5g28300                     --------->ICU4                   <------ -----TOE1(2)     <---------DAG2                            <---------ARR11(3)          <---------TOE1(2) -------TEIL      <----------DOF2                       <---------ANAC46 <---------CCA1(2)   <xxxxxxx   ggttcgaaccagatccatgactttaccgtcattcttcatcttgtactctatgaaggcttcgtgatcatcagtctcgaatctatgtcttccttcgttccac  7652200                             <---------ETT(2)                             --------->DEAR3(1)                           <-----------HVH21                           <---------ATERF1(1)                          --------->ANAC46                         <------NtERF2                      --------->ATERF1(1)                     --------->ABI4(1)                     <-----------HVH21                     <---------ATERF1(1)                     ------>NtERF2                 <---------DEAR3(1)                 --------->DEAR3(1)        --------->ARR14(2)--------->O2  ------>ZmHOX2a(2)  <---------SPL7 <------ZmHOX2a(2)  --------->DEAR3(1) -------->ARR14(3) --------->RAP2.3(1) ---------ARR14(3) --------->ATERF1(1) ---------ARR11(3) <------NtERF2 -------->ARR11(3)------>NtERF2<------NtERF2 -------->ARR14(2)<---------ATERF1(1) ---------ARR14(2)<---------RAP2.3(1) ------>ANAC58  --------->ATERF1(1)                                          *TSS ------>ANAC58 <---------ATERF1(1)                                     <----------DOF2 ---->ANAC46   <-----------HVH21                               <---------ZAT18                  <---- ---ALFIN1    --------->ANAC46------>NtERF2<---------MYB52(1)  --------->ZAT14                  ----- xxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------AHL20(2)         --------->ZAT18           <-----------   acgatcttcggtttctccgtcgccgtccccgtcgccattttatctgttatctctctaagtctaagtccactctctttcatttcaaaccgagaattgattt  7652300                                                          --------->ANAC58                                                          --------->ANAC58                                                        ==========================RAV                                                        <-----------RAV1(2)                                                      <-----------HVH21                                                     --------->ALFIN1                                                     ----------->HVH21    <------NtERF2                                                    ------->MYC2       <------NtERF2                                                    <-------PIF5       --------->ATERF1(1)                                                    ------->PIF5       --------->At4g35610                                                    <-------MYC2       <---------At4g35610                                                    <-------MYC4      ------>NtERF2 <---------ANAC58                                                    ------->MYC3      ----------->RAV1(1)                                                    ------->MYC4     <---------DEAR3(1)                                                    -------->ABF1    <---------ATERF1(2)                                                    <-------MYC3     --------->ATERF1(2)       <---------MYB52(1)                          --------->O2      <---------RAP2.3(2) --------->ARR11(3)                                <---------O2     --------->ATERF1(1) <---------AHL20(1)                                <---------TGA1a  <------NtERF2 <---------YAB1----- <---------AHL20(2)                                --------->ANAC55(2)<---------RAP2.3(1)       <---- --------->AHL20(1)<----------DOF2                 --------->TGA1a <---------ATERF1(1)        <------ -----AHL20(2)     ==========================================bZIP_DOF<---------RAP2.6(2)<---------ANAC58 ---->AHL20(2)   ----------->GT1  ----------->GT1  --------->ANAC46<---------RAP2.3(1)  <---------ANAC58 -CBF --------->TOE2(3)  ----------->GT1      <---------SPL7      <---------DEAR3(1)<---------ANAC58   taatatatcgttagtaaaccggtttaatggataaaaacgtataatcgtcgtacacgtggcaggcgatggaggcggcagagtgttttgcttgcttcgtcgt  7652400                     --------->ZAT14      <---------ANAC58                                            ----------->HVH21      <---------ANAC46                                            <----------ARF1      <---------ANAC58                                        --------->ALFIN1       --------->GLK1(2) ------>GT1          <---------ZAT14                      --------->ALFIN1<---------TOE2(3) -----ZAT6    ---------->DOF2       ----------->GT1    --------->DAG2  --------->ANAC58          ---- ---ANAC46 ----------->GT1    ---------->DOF2         ---------->DOF2  --------->ANAC58          <---   gttatttggcgtgaagtaaagagttcagagagaaaaggaagtcaaaacttcagagagaaagtggatgggggacacgaaggtagagacaatctcgaggtta  7652500                                                  ------>ZmHOX2a(1)                                       --------->DAG2                                <----------DOF2<------ZmHOX2a(2)                          ------>ZmHOX2a(1)   <---------ARR14(2)                         <---------ANAC58     --------->ARR14(2)           ----------->GT1============================HOX2a_HOX2a ----->At4g35610         <---------ANAC58  <---------------------WRI1 ------At4g35610    --------->MYB59   ---------->DOF2 ---------->DOF2           <----------DOF2     -   gctcaatggagaattgaaaattttggtccttgttctttcaaaaagtccgatcctttcaaagtcggaatttggaattggtaagcttttcatttttggttta  7652600                                                        --------->At4g35610                                                        <---------At4g35610                                                <---------YAB1                                                <---------REM1(1)                                             <---------YAB1                       --------->WOX13(1)<             <---------LBD16               --------->CCA1(2)            --------->ARR14(2)          - ----------->GT1                          --------->ARR14(2)            <---------ARR14(2)         <- -------->MYB59       <---------YAB1      <---------ARR14(2)           <------ZmHOX2a(1)      <------   ttttggtaaattttcttcggaattttgatttttgtttgttttgggatatgatgaaggcatctgtctatagagaggaatcgctatctatcagtgaggctat  7652700                --------->ARR14(2)          --------->HSFB2a(2)      <----------DOF2     <---------HSFC1(2)                                                           <---------GLK1(2)     --------->HSFB2a(1)                                                        <---------TOE2(2)     <---------HSFB2a(1)        ----------->RAV1(2)                             <---------TOE1(2)     --------->HSFC1(2)       ------->GAMYB                                  --------->YAB1   <---------ARR11(3)        --------->MYB46(3)                             <---------ATHB12 --------->LBD16<---------ARR14(2)                                  <---------ATERF1(1) ---------HSFB2a(2)         -------->P                             --------->WRKY38(1)           ---- -------->HSFB2a(2) ---------->DOF2    ----------------->AGL1      --------->WRKY12              ---- --------LBD16  --------->GLK1(2) <-----------RAV1(1)<---------ANAC58    <---------ALFIN1      ------ ----TaMYB80    <-----------ARR10 ------>ZmHOX2a(1)  <---------ANAC58   <------NtERF2   --------->REM1(1)   tcccagaactttctcgagtatctaaagagcaacctcctgttgccaaatttgttcttcgtgtctccaacgttggccccaatcgtagattctacatctctcc  7652800  Previous    Next  AGI:  At1g21760.1    Description:  F-box family protein. Identical to F-box protein 7 (FBP7) [Arabidopsis Thaliana] (GB:Q9XI00); similar to unnamed protein product [Vitis vinifera] (GB:CAO61878.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7649183    to: 7651805    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G77540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61877.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181) Range:  from: 7651635    to: 7652277    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21780.1    Description:  BTB/POZ domain-containing protein. similar to BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61875.1); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 7652018    to: 7654003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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