Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                              -------                  <----------DOF2                                                             <------                 --------------->AGL15                                                        -------          <---------TOE2(3)                                                                   <------       <---------WOX13(1)                                                                     <------      <-------GAMYB                                                                           -------     <---------MYB46(3)                                            <---------ANAC58          -------- -------DOF2  <-----------GT1                                      <---------ANAC46        --------->AHL20(2) --DOF2<--------P<---------DAG2            <----------DOF2         <---------ANAC58 --------->ZAT6---   ttttttttggttgatgttacctttttttgtttgaattcagttctcctttaatatagtttttgaggcatttcttgggacgagttctaacactaaaaatata  7648800                                                                                            <------ZmHOX2a(1)                                                                                     --------->MYB111(2)                                                                                     --------->MYB55(2) ------AHL20(2)                                                                    <---------ANAC58 -->AHL20(2)                                                                       <---------ANAC58 ---AHL20(1)              <-----------GT1                                          <-------GAMYB -->AHL20(1)          --------->AHL20(2)                                          <------MYB83 ---AHL20(2)        --------->ARR11(3)     <---------WOX13(1)                     <------MYB46(1) ---ARR11(3)<---------ARR14(2)   <---------ZAT18  --------------->AGL15  ----------->GT1  <---------TOE2(3) -->ARR11(3)--------->ARR14(2)   --------->WRKY12----------------->AGL3 --------->DAG2<-------GAMYB ->AHL20(2)<----------TaMYB80    --------->WRKY38(1)                  ---------->DOF2<---------MYB46(3) ------>AHL20(2)    <---------ARR11(3)   --------->ATHB12   ---------->DOF2      --------->MYB59   <-   ttaattctgaagcatataccaagataatatactagttgactcttaattggttccactatttgaaaagaaaacaaaaggctaatttggttgttgaggaaag  7648900                                   <------ZmHOX2a(2)                                  <---------ARR11(3)                               <------ZmHOX2a(1)                            --------->HSFB2a(2)                            <---------HSFB2a(2)                        ==============HOX2a_HOX2a                        ------>ZmHOX2a(2)                       ===============HOX2a_HOX2a                                       <---------ANAC58                      --------->ARR11(3)                                                <---------ANAC58                      --------->ARR14(2)                                         <---------AHL20(2)                      <---------ARR14(2)         <-----------GT1                 --------->AHL20(2)                 --------->ANAC58 --------->ARR11(3)                             --------->AHL20(1)        ----------->GT1<------ZmHOX2a(2)      <----------DOF2                   --------->AHL20(2)     ---------->DOF2  <---------ARR11(3)  <---------MYB52(1)       --------->YAB1<---------YAB1 --------YAB1    --------->ANAC58--------->GLK1(1)<---------At5g28300     <-----------GT1          <-   tatgagagaaaggaaactcaagcagatcgtcgaggagatcaaacgttacttttactgtccaagcgtttatcaacatttacaattttattgacttgttcaa  7649000         <----------DOF2        <---------------AGL15        --------------->AGL15       <-----------------AGL2                                                                    <---       <-----------------AGL1                                                                  <-----       ----------------->AGL1                                                                  ------       <-----------------AGL3                                                                  ------     ---------->ID1       <----------DOF2          --------->MYB52(1)                       <-------- <---------ANAC58       <---------ICU4  --------->ANAC46                                   ---------- <---------ANAC58   ------>ZmHOX2a(1) <-----------GT1                                  ----------->GT1 --------YAB1      <---------MYB59    --------->ZAT6                 ----------->GT1<------------CBF   catgcttgttccttttttggtcctaatactttcagttttttcactaaacaatctaatggaagaacgagaaacagttaaactaaaccaattggttaaagat  7649100                                                                                      --------->AHL20(1)                                              <---------ANAC58                       --------->YAB1       ------>MYB83                           <---------ANAC58                       --------->AHL20(2)     --------->DEAR3(1)                    <---------MYB52(1)                      --------->AHL20(2)    --------->DEAR3(2)                    <-------GAMYB                            *TSS    --------->MYB46(3)                   <---------ANAC58                       <---------AHL20(1) ---------CBF                            <---------ANAC58                       <---------AHL20(2) ----ARR11(3)                            <---------ANAC46                       --------->AHL20(1) --->ARR11(3)                         <---------MYB52(1)                   ------------>CBF     ----- --->AHL20(1)                       <---------MYB46(3)               --------->HSFB2a(2)   --------->AHL20(2) -TOE2(3)     <---------At4g35610   <---------DEAR3(2)               <---------HSFB2a(2)   <---------AHL20(2) >DOF2 ------>MYB46(1)             <---------DREB2C(2)          ------->TEIL    --------->AHL20(2)   attgaaaccgaccttgaactgatttaactcagaaatgtcggtttcgttgtttgtctgaattttgtgaacctcgagaaaacaataaaataatattaaaaaa  7649200                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                    <---------At4g35610                                                                    <------NtERF2                                                                    --------->At4g35610                                                                   <---------RAP2.3(1)                                                                   <---------ATERF1(1)                                                                   <---------MYB46(3)                                                                   ------>NtERF2                                                                  <---------RAP2.6(2)                                                                  <---------DEAR3(1)                                                       --------->At4g35610                                                       <---------ZAT2--------->ARR14(2)                                              ----------->HVH21<-------PIF5                                             --------->At5g28300  --------->ATERF1(2)                                             <-----------HVH21 ------->PIF5                                            --------->LBD16 <------------OsbHLH66                                           --------->LBD16 <---------SPL7                                          <---------LBD16 --------->ANAC58                                         <---------LBD16  --------->ANAC58          <---------GLK1(2)     <----------DOF2        --------->ZAT2<---------ARR14(2)      ---------->DOF2 <---------CCA1(2)<-----------GT1 <---------At4g35610       <----------DOF2 ----->DOF2      <------------------------ANAC81     <---------ZAT18--------->ATERF1(1)<-----------GT1   aagacagagaaagagtctctgtttctatcttcttctttttttttcccggtaacagggagctcgcacgggcggctacgaaatcgctgtattttcaaatcgt  7649300                                                  <---------ICU4                                               <---------AHL20(2)                                              <---------AHL20(2)             --------->ANAC46                                              --------->AHL20(2)             ----------->HVH21                                          <---------AHL20(2)               --------->ANAC55(2)                                          --------->AHL20(2)               <---------ANAC55(2)                <-----------RAV1(2)       --------->AHL20(1)         <------ZmHOX2a(2)             <---------bZIP60(1)         --------->AHL20(2)         --------->AGP1  --------->HSFB2a(2)        <---------AtLEC2         <------------------------ANAC81   --------->At4g35610       <------ZmHOX2a(2)   ctctcagtttccatgacttcaggtattgcaatcttggattcaattttattaattttgacgaattgaatcagatcaatacatgacaccgagaacagatcaa  7649400                                                         --------->ATHB12                                                        <---------YAB1                                                      --------->YAB1                                                      <---------ICU4                                                     --------->ICU4                                                   <---------ICU4                                 <--                                                   --------->YAB1                    ------>ZmHOX2a(1)                          <----------DOF2         --------->ICU4                    --------->TOE1(2)                       <-----------GT1            <---------ATHB12        <----------DOF2        <---                <---------MYB52(1)              --------->YAB1 <---------ARR14(2)<---------ARR14(2)               <-------GAMYB              --------->AtLEC2     --------->ARR14(2)--------->ARR14(2)--              <-----------RAV1(1)      <---------YAB1<---------YAB1 <---------MYB52(1)           <---   ttttgagaaattttctctgttgattaaactttctctatattttcattcaaaaatcattatgatgggaaccgtttggctttgagtatccttcgaaactcgt  7649500                                                                                      <---------AHL20(2)                              ------>ZmHOX2a(2)                                       --------->AHL20(1)               --------->AHL20(2)       --------->O2                                  <---------AHL20(1)        ----------->GT1     --------->ARR11(3)                              ----------->GT1      ----------->GT1       <---------AGP1                                 --------->DAG2 <---------WOX13(1)      <---------WOX13(1)                            --------->ANAC58    --------->YAB1 -------YAB1   <---------AHL20(2)       <---------ANAC46   --------------->AGL15      --------->AHL20(2) ------TOE2(2)<---------AHL20(2)        <---------O2       <---------------AGL15  <---------AHL20(2) ------->ATHB12--------->AHL20(1) <--------P              ----------------->AGL1  --------->AHL20(2) ------TOE1(2)--------->AHL20(2) <---------MYB52(1)     --------->YAB1 --------->ANAC58<---------AHL20(2)   atgattggaggtgaaaataatttagagattgatctggtagtctcgtgaatgtgttcaattacaaaattgagaaacgaaaggtttttaatttattcatatt  7649600                                                                                                  <--                                                                                               <-----                                                     <---------GLK1(2)                         <-----                                                <---------AHL20(2)                          <--------                                                --------->ATHB12                           <---------ANAC46                                          <---------At4g35610                              <---------ANAC58                                        <---------ZAT18         ---------->DOF2            <---------ANAC58                --------->ZAT6          --------->ZAT18  <----------DOF2                  <---------MYB46(3)               <---------YAB1----------->GT1   --------->AHL20(2)   ---------->DOF2--------->ATHB12   gaacttgtattgatgctatcactgagtttcaaggtgaaattgtgagctatttattgattcttttgtgaaagaaagaaacttgatttcattggtgcttgtt  7649700  Previous    Next  AGI:  At1g21750.1    Description:  ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase. Identical to Probable protein disulfide-isomerase 1 precursor [Arabidopsis Thaliana] (GB:Q9XI01); similar to ATPDIL1-2 (PDI-LIKE 1-2), protein disulfide isomerase [Arabidopsis thaliana] (TAIR:AT1G77510.1); similar to Protein disulfide-isomerase precursor (PDI) (GB:Q9XF61); similar to Protein disulfide-isomerase precursor (PDI) (GB:P29828); similar to protein disulfide isomerase [Brassica carinata] (GB:ABB17025.1); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Thior Range:  from: 7645689    to: 7648830    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21760.1    Description:  F-box family protein. Identical to F-box protein 7 (FBP7) [Arabidopsis Thaliana] (GB:Q9XI00); similar to unnamed protein product [Vitis vinifera] (GB:CAO61878.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7649183    to: 7651805    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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