Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------------->AGL15                                   ------->TEIL <----------DOF2                                   --------->GLK1(2)<-----------GT1                                   --------->ARR14(2)                    <------------CBF          <---------------AGL15                             <----                  --------->AHL20(1)        ---------->ID1                                    <------     <------ZmHOX2a(2)  <----------ID1     <-----------GT1                            <---------AHL20(1) ------ANAC58     <---------AHL20(2)   <----------DOF2                                <---------AHL20(2) ------ANAC58     --------->AHL20(2)   ------>ZmHOX2a(1)     <-----------GT1          --------->AHL20(2) ------ANAC46    --------->AHL20(2)<---------ARR14(2) <---------At4g35610            --------->AHL20(2)   cgtagagatcgaaatcgaaattaattgcaacaagacgaatccttttttctctttttagcttatttacaaaaaaaaactaaaaccccattaaattttcttt  7641200                                                   <---------ANAC46                                                   <---------ANAC55(2)  <-----------GT1                        <---------At4g35610  ----------->GT1 <---------AHL20(2)                      --------->At4g35610---------->DOF2 --------->AHL20(2)                 ------>ZmHOX2a(1)   ---------->DOF2               <---------GLK1(2) -----AHL20(2)               <---------YAB1        ----------->GT1       --------->At4g35610 ----DOF2                  <---------At4g35610 <-----------HVH21         <---------At4g35610   tatttaactagttgctatcagtctctctcttctgattcctgtctgctacggtcacgtttaaagaaagaaaaaatcagcaaaccccatggattcttctgtc  7641300                                  <---------ARR11(3)                 ------>ZmHOX2a(1)                              --------->ANAC58         <----------DOF2                            ---                              --------->ANAC58       ------>ZmHOX2a(1)                     <---------            <-----------HVH21 --------->ANAC46       <------------------------ANAC81     <---------ICU4     ------>ZmHOX2a(1)    --------->ANAC58      <----------DOF2  <-----------GT1         --------->MYB52(1)  ------>ZmHOX2a(1)       --------->ANAC58   ------>ZmHOX2a(1)--------->MYB52(2)      --------->YAB1   tctcctcctctctctgtcactctctcgcatgcacgagacctctcttcctcctttcctcttttgtttgtttcctctcattctcactctctcataacgacaa  7641400                                                                 --------->ANAC58                                                               ---------->DOF2      --------->YAB1                                       <---------LBD16      <---------ICU4                                   <---------ARR14(2)   --------->WOX13(1)                                  --------->ARR14(2)   <-----------GT1                                  ----------------->AGL1  <---------AHL20(2)                             --------->GLK1(1)  --------->AHL20(2)          ----------->GT1   <---------GLK1(2)--------->ANAC58      ---------->DOF2 ------>AHL20(2)       <-----------GT1          <---------ARR14(2)         <----------DOF2 -ID1<---------ATHB12 <-----------GT1           --------->ARR14(2)------------>CBF   --------->MYB46(3)   ctaattaatcatccctactctgtttttccgatttgaaaaaacaaaacccagatttcgaatttggggaaagcaatggtctttccattaaccaaagcatgag  7641500                                                                          --------->LBD16                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                        <---------------------WRI1                                    ------>NtERF2                       <---------LBD16                                   --------->DEAR3(1)                 <--------P                                 =========================================MYC_MYB------>ZmHOX2a(2)                                 ------->GAMYB                  ==============================bZIP_DOF                            <------NtERF2                       ===============MYC_MYB                           ------>NtERF2            <---------TOE2(3)<---------ANAC58                          <---------ETT(2)          <---------TOE1(3)<---------ANAC58                       --------->ALFIN1       <---------TOE1(3) --------->O2    <------ZmHOX2a(2)                     <-----------RAV1(1)      <---------TOE2(3) --------->TGA1a<---------ARR14(2)                     <---------ANAC58        =============================bZIP_DOF ---------->DOF2 <-                     <---------ANAC46        ---------->DOF2    ===============MYC_MYB            ---                     --------->ALFIN1   <---------ARR11(3)      <---------O2  <------ZmHOX2a(1) -----                     <---------ANAC58   --------->ARR11(3)      <---------TGA1a--------->ARR14(2)----   acttgaaacagcattttgtagttgtgtggcgacaacgacgacgatattaaagttagggtttttctcacatgggttgcggaggatccaaagtagatgatca  7641600                                                                         <---------At4g35610                                                         <---------MYB52(1)             <----------DOF2     <---------YAB1                                <---------YAB1        --------->At4g35610 --------ALFIN1         <------ZmHOX2a(1)        --------->YAB1       <---------At4g35610 ------>MYB46(3)       ----------->GT1  <---------At4g35610    <----------DOF2<---------CCA1(2) ---->WOX13(1)--------->ZAT14           <---------ZAT2<---------YAB1  --------->At4g35610 ---->P       <---------ZAT14        ---------->DOF2<---------ICU4 <---------At4g35610  =============   accacttgtgattctctgtagagagaggaaacaactcatcaaagctgcttctcatcatcgttgtgctttagccgctgctcatctctcttactttcaatct  7641700         <---------MYB46(3)         <------MYB83         <------MYB46(1)        <---------DEAR3(1)     <---------ANAC58     <---------bZIP60(2)     <---------ANAC46           <---------DEAR3(1)     <---------O2               --------->DEAR3(1)     <---------TGA1a         <---------ANAC46     --------->O2            <---------ANAC58                              <---------LBD16  <--------     <---------ANAC58        <---------ANAC58                              ----------->RAV1(2)  ----------->TGA1--------------------->WRI1     ------>ZmHOX2a(1)   <<<<<<<<<TBF1    ------>ZmHOX2a(1)  ----------->HVH21   <-----------GT1   --------->ARR11(3)        <<<<<<<<<TBF1     ----------->RAV1(2) ==============bZIP_DOF<---------TOE2(3)<---------ARR11(3)     <<<<<<<<<TBF1   <---------GLK1(2)   ctctgtgacgttggtgattccattaaacgtttcgtcgacgaagaactcgtcctcgttgggacttcttcttcttcttcccctgattctcctgttcttactc  7641800                                  ------>ZmHOX2a(2)                                 --------->GLK1(1)                                 <---------GLK1(1)                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                                  <                                <---------ARR14(2)                                                 <-                                <---------ARR11(3)                                                 --                                <-----------ARR10                                                  --                                --------->ARR11(3)                                                 <-                                <---------ARR14(3)                                           ========                          --------->ANAC46                                      ------>NtERF2<------ZmHOX2a(1)                  ----------->RAV1(1) ------>ZmHOX2a(1)            <---------MYB46(3)  ==============               --------->ANAC58 --------->ARR14(3)               <-------GAMYB --------->DEAR3(1)---- ---GT1        --------->ANAC58 <---------AGP1  --------->MYB46(3)<---------MYB52(1)   <------ZmHOX2a(1)   ttccttccgacgaagggaagccacataaacacaagatctcctcttcttcaacctctgtttcgcattcggttattgaagacgacgacgaaggagaaggaga  7641900                                                        ------>ZmHOX2a(2)                                                       <---------At4g35610                                                --------->ARR14(2)                                       --------->HSFB2a(2)                                    --------->GLK1(2) <---------ARR11(3)                                   <---------GLK1(2)  <---------ARR14(2)                                 ----------->ARR10    <---------AGP1 ------ZmHOX2a(2)         ------>ZmHOX2a(2)     --------->GLK1(2)      <-----------HVH21 --------ARR11(3)        <------ZmHOX2a(2)      <---------ARR14(2)    <------MYB83 ------->ARR14(2)       --------->ARR14(2)     <---------GLK1(2)      <------MYB46(1) ------->ARR11(3)       <---------ARR14(2)<---------ARR14(2)         --------->MYB59 --------ARR14(2)    --------->HSFB2a(2)  --------->ARR14(2)     --------->ATHB12 ======HOX2a_HOX2a ----------->RAV1(2) <---------HSFB2a(2)  <---------YAB1  <---------ARR14(2) ======HOX2a_HOX2a --------->At4g35610<---------LBD16 --------->ARR14(2)   <---------CCA1(2)      --- ------->ARR10--------->YAB1--------->LBD16 ------>ZmHOX2a(2)   <-------TEIL--------->ARR14(2)   ----   agatcagcatttgcatttatcatctggatccgagttagattctggatcggaatctggatctgatgattcattaggtcatatccatattgaaactagccct  7642000                                      -------->P                                             <-------                          --------->LBD16                                                 <------NtERF2                         --------->HSFB2a(2)                                             ------>NtERF2                         <---------HSFB2a(2)   <---------YAB1     --------->LBD16        --------->LBD16                       --------->MYB52(1) --------->LBD16       <---------LBD16         --------->LBD16                       -------->P     ------>MYB46(1)        --------->WOX13(1)         <---------LBD16                  --------->ANAC58    ------>MYB83         <---------YAB1              <---------LBD16         ---------->DOF2<---------LBD16 <---------LBD16<---------MYB52(1)          <-----------GT1   ---------->DOF2--------->ANAC58    --------->ZAT2<---------LBD16             <----------DOF2     < ------>DAG2    <---------ALFIN1    --------->MYB46(3)--------->LBD16       <---------LBD16  -------- ------>DOF2  --------->CCA1(2)  <-----------GT1 --------->WOX13(1)<---------MYB52(1)--------->ANAC46   aaagtgaaagagaaagaaacacgcttaccggaaaattaccagcccggttatcaatccggttatcaatccggttatcagcccggttttacgccgggatatc  7642100  Previous    Next  AGI:  At1g21740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G77500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81539.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630 (InterPro:IPR006868) Range:  from: 7641569    to: 7645067    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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