Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ARR14(2)                                                                               <------ZmHOX2a(1)                                                                           <---------TOE1(1)                                                                           <---------TOE2(1)                                                                         --------->CCA1(2)                                                                        --------->TOE1(2)                           ------->TEIL                               --------->ANAC58             <---------ZAT14                 ---------->DOF2          --------->ANAC58             <---------At4g35610    ----------->HVH21              <---------MYB59           --------             --------->At4g35610--------->ZAT2           XXXXXXXXXXXXXXXXXXXXX>MIR848        -------- ------->MYB52(1)      <---------TOE2(3)<-------TEIL--------->ICU4 --------->TOE2(3)     <-----------GT1   caaactggatgagtctgcagaagttaatgaaactagctgtgatacgttgaagccatgactatgtgtctacctaagctacgaggaatcgttttcacaaccc  7625900                   <---------GLK1(2)                 XXXXXXXXXXXXXXXXXXXX>MIR169G*        <-----------HVH21                                --------->At4g35610       <---------ANAC58                               <---------At4g35610       <---------ANAC58                               --------->At4g35610       <---------ANAC46  <---------WRKY18(1)   --------->GLK1(2)            --------->LBD16 ->ANAC58       --------->HSFB2a(2)          --------->HSFB2a(1) --------->ARR14(2)          <------- ->ANAC58       <---------HSFB2a(2)          <---------HSFB2a(1) <---------ARR14(2)       -----------   attcttgatgcgtcaagtccagaaacttgaccttggaagagctaagaaaattctgaagctgatgcagtatttggctccctggcaaatgagcgtagttatt  7626000      <---------ICU4      --------->ATHB12            --------------->AtSPL8                             ---------->ID1    <---------ARR11(3)      --------->YAB1                                         <---------MYB46(3)    --------->ARR11(3)     <---------ATHB12                                        --------->MYB52(2)   --------->YAB1         ------>MYB46(1)                                  <---------YAB1  <---------YAB1          ------>MYB83                               --------->AHL20(2)  --------->ICU4       --------->MYB46(3)      <----------DOF2       <---------AHL20(2) --AHL20(2)       <---------TOE2(3)         <-----------GT1         --------->AHL20(2) >GT1<---------YAB1 <------ZmHOX2a(1) ------->TEIL                  <---------AHL20(2)    <----------DOF2   tgttatgatcattgtttactaaggaaccaatcttgatatgtacttgtaactttacattcaaacttccaaattaaattctaattgtttgttccctttgcaa  7626100                                                                                      --------->YAB1                                                                                     ----------->TBP                                                                                   --------->HSFB2a(2)                                                                                   <---------HSFB2a(2)                                                                            <---------AHL20(2)                                <<<<<<<<<GATA-1                             <---------AHL20(1)                           <----------DOF2                                  --------->AHL20(1)     --                        ---------->ID1                                      --------->AHL20(2)    ---                  --------->GLK1(2)                                        --------->AHL20(2)    <---              --------->YAB1   <-----------GT1                             <---------AHL20(2)--------    --------->ATHB12   <-----------GT1  <----------DOF2           <---------ANAC46 <---------------AGL15   ttctcttgatttgaaatgagaattttttccttttatctatttcttttgtcaaaaaacaaaactaaatttcgtcgaaattaaatttctataagaagcccaa  7626200                                                                          --------->DEAR3(2)                                                                          <------NtERF2                                                                          --------->MYB46(3)                                                                         ------>NtERF2                                                           <---------GLK1(1)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                                     <---------ZAT2     *TSS  <---------ETT(2)                                                     --------->ZAT2  --------->ANAC46      ------>NtERF2                                <---------RAP2.6(2) --------->MYB46(3) ------->DAG2                                  <---------HSFB2a(1)   --------->ANAC58 ------->DOF2                <------------CBF---------->DOF2         --------->ANAC58   ------------- ------ATHB12              <---------YAB1---------->DOF2  <---------GLK1(2)--------->DEAR3(1) ---->CBF      --------->MYB59      <------NtERF2 <---------LBD16------>ZmHOX2a(1)<----------DOF2   taaagcgaggcctaaattaggcccaaaatactattggaggcgaaaaagaaagtccggctggattttcctccaagccaccgtcgactttacttagtactcc  7626300                          <---------ANAC58                                                     <-----                       --------->GLK1(1)                                                     --------                      <---------ARR14(2)                                              <---------MYB52(1)                      <---------GLK1(2)                                               <--------P                      --------->ARR14(2)                                             <---------MYB52(1)                    <---------TOE1(2)--------->HSFB2a(2)                            <---------DEAR3(2)               ------>ZmHOX2a(1)     <---------HSFB2a(2)                          --------->DDF1 ----            ------>ZmHOX2a(1)        ----------->GT1                        ----------------->AGL1        <---------ALFIN1  <---------ANAC58                                  ----------------->AG<---- -->AtSPL8 <---------ALFIN1       <---------MYB52(1)                        <-----------------AGL1   ctctctctcccctcctccttcccagatttcgtctccgttctgaaaaaaactccaaattctactctgaaaccctaagtttccgatgtcggtaagtttgata  7626400                                            --------->ANAC46                  <---------ANAC46          <---------ANAC55(2)            <---------AHL20(2)           <---------SPL7      <---------AHL20(2)     --------->ZAT2 --------->ANAC55(2)     <---------MYB52(1)      <---------ZAT2 --------->ANAC58                       <---------WOX13(1) ----YAB1  <---------AHL20(2)<---------At4g35610                                 --------->ATHB12 ->YAB1    --------->AHL20(2)--------->At4g35610             --------->YAB1 <---------AHL20(2) ----->KAN4(2)   <---------LBD16       <---------ZAT6----------->GT1    ----------->GT1    <--------- -----ICU4--------->YAB1 --------->AtMYB61  --------->ANAC58 <---------ICU4--------->AHL20(2)      --   attcccagttaattttaatttcggagacctcagctctattagtcttacgcatcaatggtttaatagtgactgaacgataaaattgattgatatttgtggc  7626500              <---------ZAT14          <---------HSFB2a(2)      ------>ZmHOX2a(2)     <------ZmHOX2a(2)                     <------MYB83    <-----------ARR10                      ----------->GT1    --------->ARR14(3)                     <------MYB46(1)    <---------ARR11(3)                    --------->MYB59    <---------ARR14(3)                    --------->MYB111(2)    --------->ARR11(3)                    --------->MYB46(2)    --------->ARR14(2)                    --------->MYB111(1)    <---------AGP1                    <---------TOE2(3)    --------->AGP1                    <---------YAB1    <---------ARR14(2)        <-----------RAV1(1)   <---------CCA1(2)        <-------GAMYB<--------P                      ------>ZmHOX2a(2)  ----------->ARR10        <-----------RAV1(1)               <---------ATERF1(1) --RAV1(1)--------->HSFB2a(2) <---------MYB46(3)--------->ICU4       ----------->HVH21    <---------At4g35610 ------->AtLEC2         --------->ALFIN1 <---------MYB55(1) --------->DEAR3(1)            --------->At4g35610   gatgcagatcttcgagtacaatggaagtgctgttgttgctatggtaggtaagaattgtttcgccatcgccagtgatcggagactcggtgttcagctacag  7626600                               --------->CCA1(2)                              --------->ARR11(3)                              <---------ARR11(3)                     --------->ARR14(2)                     <---------ARR14(2)                     --------->GLK1(2) <---------ANAC58                --------->LBD16<------ZmHOX2a(2)                     ------>NtERF2               --------->HSFB2a(2)     ------>ZmHOX2a(2)            <---------ALFIN1           --------->GLK1(1)  --------->ARR14(2)                    --------->DEAR3(1)         <-----           <---------GLK1(1)  --------->AGP1                     --------->ANAC46              <-----        <---------ATHB12      <---------ARR14(2)                 --------->ANAC58              <-----  ------->GAMYB<---------HSFB2a(2)     <---------ANAC58          --------->ANAC58       --------->ZAT14  --------->ANAC46  <---------GLK1(2) <------ZmHOX2a(2)<----------DOF2<------NtERF2   --------->At5g28300   acaatcgccactgatttccagagaatctccaagatccacgatcgtgtcttcatcggtctttctggtctcgccaccgatgttcaaacactgtaaactatcg  7626700                                                                ---------->ID1                                                           <---------AHL20(2)                                                         <---------CCA1(1)                                                         <---------RVE1(1)                                                        <---------GLK1(2)                                                        --------->ARR11(3)  <---------HSFC1(2)                                    <---------ARR11(3)                      -----  --------->HSFC1(2)                                  ----------->ARR10                        <----- --------->ANAC58                              <---------At4g35610   <----------DOF2           ------ --------->ANAC58                            --------->ZAT14    <-----------GT1       <---------YAB1 ----ANAC46                                  --------->ZAT18   <-----------GT1  <----------DOF2------ ----ANAC58                                  <---------ZAT14  <------------------------ANAC81  <----- ----ANAC58     --------->YAB1  <-----------GT1--------->At4g35610 ------>ZmHOX2a(1) <---------TOE2(3)   tgcaagcttctaaatttttcatatttgtttgtttttacattttgaagtgaactgagaagattttttttcctctttgttttgtcttttgatgtttgaagat  7626800  Previous    Next  AGI:  At1g21710.1    Description:  OGG1 (8-oxoguanine-DNA glycosylase 1). similar to 8-oxoguanine DNA glycosylase [Populus nigra] (GB:BAF03495.1); contains InterPro domain 8-oxoguanine DNA glycosylase, N-terminal; (InterPro:IPR012904); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain HhH-GPD; (InterPro:IPR003265); contains InterPro domain Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal; (InterPro:IPR012294) Range:  from: 7624385    to: 7626105    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21720.1    Description:  PBC1 (20S proteasome beta subunit C1); peptidase. Identical to Proteasome subunit beta type-3-A (PBC1) [Arabidopsis Thaliana] (GB:Q9XI05;GB:O23707;GB:Q0WWF5;GB:Q8LEA7;GB:Q8VZC4); similar to PBC2 (20S proteasome beta subunit C 2), peptidase [Arabidopsis thaliana] (TAIR:AT1G77440.2); similar to PBC2 (20S proteasome beta subunit C 2), peptidase [Arabidopsis thaliana] (TAIR:AT1G77440.1); similar to Proteasome subunit beta type-3 (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) (GB:O65084); contains InterPro domain Proteasome, beta-type subunit, conserved site (InterPro:IPR016050); contains InterPro domain 20S proteasome, A and B Range:  from: 7626272    to: 7628251    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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