Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <------NtERF2         ------->TEIL          ---------->DOF2             <---------CCA1(2)     --------->REM1(1)  --------->ARR11(3)     --------->ZAT6     <---------ARR11(3)    <---------ZAT14     --------->AHL20(1)                         --------->ZAT6    --------->ZAT14    --------->RVE1(1)                         <-----------GT1  --------->ANAC46     --------->CCA1(1)                      ----------->GT1 ------->ZAT18  --------->RAP2.6(2) <---------ANAC55(2)    --------->ZAT2 ---->ANAC58    ----------->GT1     --------->ANAC55(2)    <---------ZAT2 ---->ANAC58 <----------ID1 ----------->GT1         <---------CCA1(2)   gtaccctacactaaaaggccgaaaaatatcttgttaatatgtatctacagttttgtatcccagcttgtaactctacttatagatttgtatgagactgcca  7615200                                <---------MYB52(1)                                --------->DOF5.7(2)                               --------->TOE2(3)                               <-------GAMYB                              ------>ZmHOX2a(2)                              ----------->GT1                                --------->CCA1(2)                            --------->ARR11(3)         ----------->GT1       --------->GLK1(1)              <----------DOF2<------ZmHOX2a(2)    --------->YAB1            <---------ARR11(3) <---------ARR14(2)         <---------ARR11(3) <---------CCA1(2)            --------->ARR11(3) --------->ARR14(2) <---------YAB1            ------->TEIL           <---------YAB1              ----   ctgtatatgcataagactttgtattatagagatcgttaatgtgatatgtatatcatattgtcaaaacagtcgtgataagatatcaaaccctcttctaaat  7615300                          ------>ZmHOX2a(1)                      --------->ARR14(2)                                                  --------->RVE1(1)                      <---------ARR14(2)                                                 --------->GLK1(2)                <---------ANAC46                                                         --------->ARR11(3)             <---------ANAC58                                                            <---------ARR11(3)             <---------ANAC46                                  <---------WOX13(1)       <---------GLK1(2)             <---------RAP2.6(2)                       ---------->CDC5         <---------AHL20(2)   -             <---------ANAC58             <-----------HVH21  --------->ATHB12 <---------AHL20(2) ---- ----->YAB1 <---------LBD16         >>>>>>>>>>>>>>>>>LFY    <---------YAB1    --------->AHL20(2) <---   gatagtcttgctattgcggtttggaatcctcatgaattatccaatgtcaattcaatctcagcgtgattgaagacaggtttttaaattccaaaatctcttc  7615400                                                        <---------At4g35610                                                      <-----------RAV1(2)                                                    <-----------HVH21                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                                 <---------ANAC58                                                 <---------ANAC58                             <------                                                <-------TEIL                                  <------                                                ------->TEIL                                 <-------TEIL                                             <---------ANAC58                             <---------ANAC58                                 <-----------GT1--------->SPL7                            <------MYB83                              <---------ICU4 <---------ANAC46                             <------MYB46(1)     <---------ANAC55(2)     --------->ICU4  <---------ANAC58                             <---------ANAC58 -------->YAB1            <-------TEIL      --------------->AtSPL3                       --------->MYB46(2) ----->TOE2(3)        <---------YAB1        <---------------AtSPL3                       --------->MYB111(1) -------DOF2 --------->WOX13(1) <---------YAB1<---------SPL7                             --------->MYB59   tttaatcacgtttataaatcagttttgatacattattactatgttttgcgtacgtgtcagaagattactatccatgtaatgtctgaagaattaggtgcga  7615500                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                  ----------->GT1                                                                  <------NtERF2                                                                 --------->LBD16                                                                 ----------->GT1                                                                <---------ANAC58                                                                <---------ANAC58                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              <---------ATERF1(1)                                                              --------->ALFIN1                                                              ------>NtERF2                                                             <---------PCF2                                                             --------->ALFIN1                                                            <------NtERF2                                                            --------->ATERF1(1)                                                           <---------ATERF1(1)                                                          <---------ANAC58                                                          <---------ANAC46                                                 <------MYB46(1)<---------ANAC46           ----------                                                 <---------HSFB2a(1)   --------->GLK1(2)   --------->ICU4                                                 --------->HSFB2a(1)  --------->GLK1(1)    <---------YAB1                       --------->GLK1(1)         <------MYB83<---------DEAR3(1)     <---------ANAC46         --------->MYB52(1)               <---------ANAC46--------->ALFIN1 --------->LBD16<---------TOE2(3)      --------->YAB1   --------->CCA1(2)  <---------ANAC58<---------DEAR3(1)      <-----------HVH21 ---------->DOF2      --------->ARR11(3)  <---------ANAC58<---------ANAC58<---------HSFB2a(2)     --- ---ANAC58            <---------ARR11(3)  <---------bZIP60(2)<---------RAP2.3(3)  --------->TOE1(2) ---ANAC58  ------->GAMYB              ----------->HVH21 <---------LBD16  --------->HSFB2a(2)  <-----   gtcaaaagtcataacagtcgataagatatcaaaccctcttcgtgacttggaaggtttgaggcgggggcgggaaaatccagaaaacgtcggataatgttta  7615600                                                                                 --------->ZAT18                  --------->LBD16                                                ----------->HVH21                <---------LBD16                                       <---------ARR11(3)                <---------At4g35610                                   --------->ARR14(2)            <-----------HVH21                                         <---------ARR14(2)            <-----------TGA1                                      <------NtERF2--------->At4g35610 ->GT1     --------->ANAC46                                      ------>NtERF2 <---------At4g35610 ------->DOF2----------->HVH21                                   <---------RAP2.3(1) ------TBP *TSS --------->At4g35610  ---------->DOF2      <------ZmHOX2a(1)    --------->ZAT2   taaaggagtctctccgtcaccggagaaaaattagaagaaaaaagaggcgaagaagagagaggaatggcgccagttcttcagagctcacagccatgggttg  7615700                                                                                             <------NtERF2                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           --------->ATERF1(2)                                                                                           <---------RAP2.6(2)                                                                                           --------->DEAR3(1)                                        --------->ANAC46                                   <---------ATERF1(2)                                        --------->ANAC55(2)                               --------->RAP2.6(3)                                       <---------LBD16                                ===============                                      <---------DOF5.7(2)                             ------>ZmHOX2a(2)                                     ----------->HVH21                              --------->ARR11(3)                                     --------->WRKY38(1)                            <---------AGP1                                     --------->WRKY12 ----------->GT1               <---------ARR14(2)                                    --------->DOF5.7(2)                             --------->ARR14(2)  <---------------AtSPL8           <-------GAMYB      <---------ANAC46        --------->ARR14(2)  --------------->AtSPL3          <---------ANAC46 --------->ALFIN1           <---------ARR14(2)<----  <---------------AtSPL3    <---------AHL20(2)   <-----------RAV1(1)       ----------------->AGL1   <   agaaatagtacgatttcttctcactgattttttatttcgttgacggaatttatgtggggtttaataaactcattgtttccgatttggatctagccggccg  7615800                                                                            <-----------GT1                                                                    <---------ANAC46                                                                    --------->ANAC58                                                                    <---------TGA2(1)                                                                    ----------->GT1                                                                    --------->ANAC58             --------->ALFIN1                                       --------->TGA2(1)            <-------PIF5                         ------>MYB46(1)    --------->bZIP60(1)            ------->PIF5                         ------>MYB83       --------->ANAC55(2)           <---------ANAC58         <---------ANAC46                <---------ANAC55(2)           <---------bZIP60(2)      --------->MYB52(2)         <---------ZAT2           ===============================================MYC_MYB   <---------bZIP60(1)           <---------ANAC58         <---------ANAC58           --------->ZAT2           --------->TGA1a          <---------ANAC58           <---------At4g35610           --------->O2            <-------TEIL  -------->P    --------->At4g35610           <---------O2         <---------MYB46(3)     ----------------------->TaNAC69(2) -ATERF1(1)<---------TGA1a      --------->MYB55(2)<---------ALFIN1<---------TGA2(2) -SPL7 <---------TOE2(3)       --------->ALFIN1--------->AtMYB61 ----------->TGA1 ===============HOX2a_HOX2a    <---------AtMYB61----------->RAV1(1)----------->STF1 --NtERF2<------ZmHOX2a(1)  --------->ALFIN1  --------->MYB46(3) ----------->HVH21                 -- -----------RAV1(2)     <------ZmHOX2a(1)  ------>ZmHOX2a(1)   ----------->bZIP910(2)   <----------DOF2   aagcaggttaaggacgtggctcaccaggaagaggtggttcgtgtcctcaccaacactctccagactgctgacgtaatttcactataacctctttgtttat  7615900                       --------->GLK1(2)                    <---------AHL20(2)                    --------->AHL20(2)                   --------->YAB1                  <---------YAB1                -------->HAHB4                <--------HAHB4                --------->YAB1                -------->ATHB1                <---------ICU4                --------->ATHB51                <---------AHL20(2)                                           <---------LBD16               <---------YAB1                                     <------MYB46(1)               <---------ATHB12                                   <------MYB83                     --               <---------ATHB51                                  --------->MYB59         --------->AHL20(2)          --------->TOE2(3)                                   --------->ARR14(2)         <---------AHL20(2) ------->ANAC46--------->ICU4           ----------->GT1       <---------ARR14(2)     <---------AHL20(2)   cgcgaaacaaatccctaattattaaaatctgattttgtacaagtgtgaaaaaccctagatgtcgaatttggttctcaattctgggttttaattttttgtt  7616000                      <-------MYC3                      ------->PIF4                      ------->MYC3                      <-------MYC4                      ------->MYC2                      <-------PIF4                      ------->PIF5                      <-------PIF5                      <-------MYC2                   <---------ALFIN1                  <------NtERF2                  --------->LBD16                 --------->ANAC58                 --------->ANAC58                                                                <---                <---------ATERF1(2)                                                              <---                --------->ATERF1(2)                                                              ----              --------->ZAT18                                                                    <---        <---------REM1(1)                                                                      <-----      <-------GAMYB<------------OsbHLH66  --------->ANAC46                                     ------     <-----------RAV1(1)              --------->AtMYB61         <---------ZAT18         <----------DOF2 -------->ID1 <---------ZAT18        --------->MYB46(3)  --------->AtMYB61            <----------DOF2   tgtctctctgttgtagtgcccgcacatgctcttctatggaccaccaggcactggaaaaaccactactgctcttgccatcgctcaccagctctttgggtaa  7616100  Previous    Next  AGI:  At1g21680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73514.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61906.1); similar to hypothetical protein OsJ_012725 [Oryza sativa (japonica cultivar-group)] (GB:EAZ29242.1); contains InterPro domain WD40-like Beta Propeller (InterPro:IPR011659); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042) Range:  from: 7612994    to: 7615328    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21690.1    Description:  EMB1968 (EMBRYO DEFECTIVE 1968); ATPase. similar to replication factor C 40 kDa, putative [Arabidopsis thaliana] (TAIR:AT1G63160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61903.1); contains InterPro domain Replication factor C; (InterPro:IPR013748); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 7615611    to: 7618594    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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