Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ARR14(2)                                            <---------ARR11(1)                                            --------->ARR14(2)                                           <---------CCA1(2)                                          --------->LBD16                                      ------                      ----------->GT1    <---------ANAC55(2)                                  -------                      <------MYB46(1)--------->KAN4(2)                                        <------                <---------WOX13(1)  --------->KAN4(1)                                         -------         <---------YAB1    --------->ICU4--------->ANAC55(2)                           <--------P    ----------->GT1   <------MYB83  <---------KAN4(1)           <----------DOF2      ----------->GT1 -------->ARR11(3)  <---------WOX13(1)--------->GLK1(2)      <-----------GT1      ---------->DOF2 --------At4g35610--------->ATHB12 <---------KAN4(2)     <---------WOX13(1) <---------ZAT14   <------   cagatgttgttatattagattgattggtaattttgggaataatccgtatccattttttgatttatactttctattttgtaaactgaaaggtaagtagata  7588200                                                                                 <--------ATHB1                                                                                 --------->ATHB51                                      <---------YAB1                             --------->AHL20(2)                                 <---------YAB1             -------->HAHB4       --------->YAB1                            ----------->GT1                 <---------ICU4       <---------ICU4 --->CCA1(2)                <---------ZAT6  <----------DOF2--------->ICU4        <---------AHL20(1) -->ARR11(3)           <---------ATHB12--------->YAB1 --------->YAB1            <---------ATHB12 ---ARR11(3)     <-----------ARR10   <---------ARR11(3)    <---------ATHB51     <---------ATHB51 -->ARR14(2)     <---------ARR11(3)  --------->ARR11(3)  <---------ICU4         --------->ICU4    <-- ---ARR14(2)     --------->GLK1(2)--------->YAB1      ----------->GT1  --------->YAB1             ---   tactattagcatttctcaaaatctaatcaagtgttataatatcatacttttgttgatagtaattatgccagaatcatatgcaataattttcttaagagca  7588300                                                                             --------->AHL20(2)                                                                            <---------AHL20(2)             <-----------GT1                                    <---------At5g28300     --------->At5g28300   --------->ALFIN1             <---------ANAC58               <-----------GT1   <-----------GT1   <-----------RAV1(1)          <---------ANAC46             <----------DOF2--------->AHL20(2) -------ARR14(2)                <---------ANAC58   <---------AHL20(2)   --------->AHL20(2) ------>ARR14(2)           --------->At4g35610    --------->AHL20(2)    <---------AHL20(2)     ------   tatatgtgttggaatttacgaattcaatctgatgccgttcaaatttgtttgataaaattagtgatttactgtatataaataattttccacagtaatatag  7588400                                                                      <---------------AGL15                                                                      <----------DOF2                                                                     <-----------------AGL3                                                                     <-----------------AGL2                                                                  <---------CCA1(2)                                                    --------->AHL20(2)--------------->AGL15                                        ---------->DOF2  <---------ICU4                           ===   <----------ID1             <----------ID1  ----------->GT1    ------>ZmHOX2a(1)                --- ----->GT1              --------->AHL20(2)  ---------->DOF2     --------->TOE2(3)            --------   taaaaacgaagaaatggatgaacaaatgaaatacgagaaattgaaagaaagaaaaaaaatcattttccttatctttttatggtcataagaagaagagatg  7588500                       <-------MYC2                       ------->MYC2                       ------->MYC3                       <-------MYC3                       ------->PIF4                       <-------PIF5                       ------->PIF5                      --------->ANAC58                   <---------ZAT14                   <---------ZAT18                   --------->ZAT18                <---------ANAC58                <---------ANAC46                <---------ANAC58              <---------ZAT14            ------->MYC2            <-------MYC2            <-------MYC3            ------->MYC3         --------->O2            ------->PIF5--------->ANAC46            <-------PIF5--------->ANAC58           <---------ANAC58      --------->TGA1a           <---------ANAC46      <---------TGA1a           <------NtERF2--------->ANAC58           <---------ANAC58 <---------At4g35610         <---------ANAC58   <---------ZAT2         <---------ANAC46   --------->At4g35610         <---------ANAC58   --------->ZAT2      ------------>CBF      --------->DAG2  --------->ANAC58 --------->WOX13(1)    =======================================bZIP_DOF    ---------->DOF2--------->ZAT14   ------------>CBF ==========================================bZIP_DOF <<<<<<<<<ARR2                     *TSS     <----- ------->DOF2--------->ALFIN1    <---------O2  --------->YAB1                    <-----------GT1 ->CCA1(2)------>NtERF2<-------PIF4 <-----------HVH21--------->YAB1        <---------AHL20(2)  ------   gaaagtgaaaggcgcgtggagtgcacgcgcagctcaagtgtcaatccagtcacaatcaaatggaagaagcacaagttttaattcaacctcttcggcaatg  7588600                                                                          ------>NtERF2                                                                          --------->LBD16                                                             --------->ARR11(3)                           ------>MYB46(1)                   <---------ARR14(2)          <---------ARR14(2)          <---------HSFC1(2)     <-----------GT1       --------->ANAC46          --------->ARR14(2)          --------->HSFC1(2)     --------->ARR14(2)   ----------->RAV1(2)     <------ZmHOX2a(1)     ------>MYB83    <---------HSFB2a(2)           --------->ANAC46      ------    <----------ID1   <-------TEIL--------->AtLEC2           --------->GLK1(1)     <---------LBD16 ----ATHB12    --------->ANAC46  ------>ZmHOX2a(1) --------->AtMYB61    <---------LBD16    <---------MYB52(1) --->ICU4 ------->TEIL  --------->ANAC46   --------->HSFB2a(2)     <---------GLK1(2)   ------->TEIL   aagaagaggacgaatccacgaggtccaccaaattcctgcaaacttccaaaacaccatctcaaatatccacattctccgccattaccctgaaccgtttctc  7588700                                                                          --------->GLK1(2)                                                <---------YAB1           --------->ARR14(2)                                              --------->YAB1             <---------GLK1(2)                                             <---------ATHB12        <---------LBD16                                            ------>MYB46(1)          <------NtERF2                                            ------>MYB83            ------>NtERF2                                          <---------MYB59          <---------ALFIN1                                     --------->bZIP60(2)          --------->MYB46(3)                                     ===============================bZIP_DOF<-----------ARR10                                     --------->ANAC58            ------>NtERF2            <---------At4g35610                                     --------->TGA1a             <-----------HVH21     ------>NtERF2                                     --------->ANAC46           --------->ANAC46    <---------ATERF1(1)                                     --------->ANAC55(2)        --------->LBD16     ------>NtERF2                                     <---------ANAC55(2)        ------>NtERF2      --------->ANAC46                       <----------DOF2  ------->TEIL     <----------DOF2 <---------ARR14(2)        <-                       ========================bZIP_DOF <---------DAG2 --------->LBD16<---------ALFIN1           <---------TOE1(2)         --------->ANAC58  <------NtERF2--------->MYB52(1)--------->DEAR3(1) --->HSFB2a(2)    ------>ZmHOX2a(1) --------------->AtSPL8    <---------LBD16     <---------LBD16----   gagttgtttctctcatgttcctatgcttttgcccttgccacgtacctatcatgagtcgcctttctccggccaccggaatctcttcccgcctccgcttctc  7588800                                              <---------ANAC46                                           --------->ARR14(2)                                           <---------ARR14(2)                                       <---------LBD16                                       ----------------->AGL1                                       <-----------------AGL1                                     --------->GLK1(2)                    ------>NtERF2        <---------GLK1(1)           --------->ARR14(2)                   --------->DEAR3(1)        <- <---------MYB46(3)                 <---------GLK1(2)                 --------->ANAC46             <- --------MYB52(1)      --------->AHL20(2)--------->LBD16      ----------->GT1                      -- ----->ATHB12       ----------->GT1 <---------ARR14(2)        <---------ANAC46                     --   cattggtttgagttccgatggacgattaattcccttcggattccggtttcggagaaacgatgtcccgtttaaacgccgcttgagatttgtgatcagagcg  7588900                                              --------->ANAC55(2)                                              <---------ANAC55(2)                                        <---------TOE1(3)                                        <---------TOE1(2)                                  <---------ARR14(2)                          --------->MYB59     <---------ANAC58           <----------DOF2<---------TOE2(3)   <---------ANAC58                 <---------YAB1           <---------DAG2 <---------TOE1(3)  --------->MYB52(2)         <---------ANAC46 --------At4g35610  --------->LBD16     <---------TOE2(2)               <---------ANAC58 --------ZAT2      <-----------------AG<-----------RAV1(2)              <---------ANAC58          --- ------->At4g35610<---------LBD16 --------->ARR14(2)                <---------ANAC58            <---- ------->ZAT2   <-----------GT1   <---------GLK1(2)                 <---------ANAC58   <----------DOF2   cagctctctgaagctttttctcccgatttaggtttggattctcaggttacttacttacttctctcgacttccttgcttgttttcattcactttgttcgat  7589000                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR14(2)                                     --------->AHL20(2)                                     <---------AHL20(2)                                    --------->AHL20(2)     <---------GLK1(2)                                    <---------AHL20(2)<----------DOF2                             <---------At4g35610   <---------ARR14(2) >>>>>>>>>RAP2.2             --------->ZAT2        <---------ARR11(3)         <---------ARR11(3) --------->TOE2(3)           <---------ZAT2        --------->ARR11(3)       --------->ICU4 ------>WOX13(1)             --------->At4g35610  <------ZmHOX2a(1)         <---------YAB1       <--- --ZmHOX2a(2)               --------->GLK1(2)   <---------TOE1(2)         --------->YAB1     <-------   caatctaaacttagagagacagagtttgcgaagctgaatttaattgttcttaggatctttagattatcgaatcgtttcatgatttttaagcgaaactttt  7589100  Previous    Next  AGI:  At1g21630.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G20760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64708.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47530.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain EPS15 homology (EH) (InterPro:IPR000261); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Polyadenylate-binding protein/Hyperplastic disc protein; (InterPro:IPR002004) Range:  from: 7581141    to: 7588140    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g21640.1    Description:  NADK2 (NAD KINASE 2); NAD+ kinase/ calmodulin binding. Identical to NAD kinase 2, chloroplast precursor (NADK2) [Arabidopsis Thaliana] (GB:Q9C5W3;GB:Q9XI15); similar to NADK1 (NAD kinase 1), NAD+ kinase [Arabidopsis thaliana] (TAIR:AT3G21070.2); similar to hypothetical protein OsJ_031917 [Oryza sativa (japonica cultivar-group)] (GB:EAZ17708.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61917.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ79923.1); contains InterPro domain ATP-NAD kinase, PpnK-type, alpha/beta; (InterPro:IPR017438); contains InterPro domain ATP-NAD/AcoX kinase; (InterPro:IPR0025 Range:  from: 7588586    to: 7592879    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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