Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               ------>NtERF2                                                                                             <------NtERF2                                                                                            <--------                                                                              <---------At4g35610                                                                              --------->At4g35610                                                                           <---------At4g35610                                                                           --------->At4g35610                                                                           <---------ZAT14  ------>NtERF2                                                                           <---------ZAT2   ---------                                                                           --------->ZAT2  <---------DEAR3(1)                                                                        ----------->RAV1(2)--------->DEAR3(1)                                                                      --------->DREB2C(2)  --------->ATERF1(2)                                                                      <---------ALFIN1     <---------RAP2.6(2)                                                                      --------->DEAR3(1)   <---------ANAC46                                                                    --------->ABI4(1)      <---------ATERF1(2)                                                                   <---------ALFIN1       <---------At4g35610                                                                   --------->DEAR3(1)     <------NtERF2                                                                   --------->AtMYB61      --------->At4g35610                                                                  --------->MYB46(3)      ------>NtERF2     --------->ARR14(2)                                           <---------MYB55(2)      --------->ATERF1(1)     <---------ARR14(2)                                         --------->ANAC46          <---------DREB2C(1) ------->ARR14(2)                                               <---------ALFIN1          --------->DEAR4(2) --------ARR14(2)                                               --------->AtMYB61         <---------ATERF1(1) -------CCA1(2)                                      <---------ARR11(3)------>NtERF2     <---------RAP2.3(1) ---->AtMYB61                                        --------->ARR11(3)--------->ABI4(1) <---------ATERF1(1) ->AtMYB61                                          --------->GLK1(1) ------->GAMYB     <---------RAP2.6(2) >MYB46(3)                                          <---------GLK1(1)--------->DEAR4(2) <---------DEAR3(1) -MYB55(2)          --------->ETT(2)         ---------->DOF2   --------->MYB46(3)      <---------LBD16   atatccgaatcccatccttgtgtcgatataaaactcttactctgaacaaaagcgatatctccatcaccaccaccgcctgcagcggctatcgcggcggcca  7573500                                                                                                 <---                                                                           --------->ANAC46      <---                                                                          <------NtERF2         <----                                                                          --------->At4g35610   <----                                                                          <---------At4g35610   -----                                                                         <---------ATERF1(1)    -----                                                  ------>ZmHOX2a(1)     --------->SPL7          -----         --------->ANAC46                  <---------ALFIN1             <---------ZAT18         ----- <-----------HVH21     ------>ZmHOX2a(1) ------>ZmHOX2a(1)            <-----------HVH21  --------->At4g35610 -ATERF1(1)    --------->YAB1      --------->At4g35610         --------->YAB1    --------->AtMYB61--- >RAP2.6(2)   <---------YAB1       <---------At4g35610      <---------CCA1(2) <---------ALFIN1 <-----   aggggtcatactcgacatcatagtccttcttgttgtcaacttcctctacctcctcatcatccatatcatactcgtccgctccacctccatcagcatcgac  7573600                                    --------->GLK1(1)                                    <---------GLK1(1)                                 <------NtERF2                               <---------ANAC46                              <------NtERF2                            --------->bZIP60(2)                            <---------TGA1a                            --------->O2                            =============================bZIP_DOF       --------->DOF5.7(2)  =============================bZIP_DOF      --------->TOE2(3)     <---------O2      <----------DOF2      ------>NtERF2      ================================bZIP_DOF <---------At4g35610       <------NtERF2 --------HVH21             --------->ATERF1(1)                                --------->ANAC58 --------TGA1             <---------ATERF1(1)                   <---------MYB52(1) -----O2                  --------->RAP2.6(2)                  <---------SPL7 --------->ANAC58 -----bZIP60(1)          <---------DEAR3(1)          <------NtERF2         ----------->HVH21        < ---->O2 <---------DOF5.7(2)--------->TGA1a          --------->ANAC58      ----------->TGA1        -- ---->bZIP60(2)        --------->DEAR3(1)            --------->ANAC58     <---------WOX13(1)     <--- ---->ANAC46          --------->ANAC58              ------>NtERF2--------->SPL7              -------- ---->bZIP60(1)       --------->ANAC46             <---------ANAC46 <---------MYB52(1)    <----------CDC5 ------>TGA2(2)       --------->ANAC58    <---------ZAT6---------->DOF2<---------YAB1    --------->At4g35610 ------STF1--------->MYB46(3)<-----------HVH21---------->DOF2  <-----------HVH21         <---------At4g35610   gtcatctactttaacgactataccacggccgcgtcgggatttcagtgttaaaggcgcgaaaagaccgtccgttctgaatgacgcaaatagccgctgagag  7573700                                                              --------->ANAC46                                                              --------->RAP2.6(2)                                                      <------NtERF2                                                      --------->At4g35610                                                      <---------LBD16                                                     <---------RAP2.3(1)                                                    <---------DEAR3(1)                                                    <---------RAP2.3(2)                  --------->HSFB2a(2)           ---------->DOF2                  <---------HSFB2a(2)     <------ZmHOX2a(1)   --------->ANAC58               <-------        --------->DAG2                  <---------TOE2(3)     --------->ANAC58      --------->ZAT18        <---------TOE2(3)               --------->ANAC58    <---------ATERF1(1)   <---------At4g35610 ------NtERF2 <---------ANAC46          --------->ANAC58 <------NtERF2          --------->DAG2 ------->LBD16<---------ANAC58        --------->CCA1(2)<---------ANAC46  <---------At4g35610 -------- ------LBD16  <---------ANAC58     <---------ZAT6  --------->At4g35610   <-----------------------TaNAC69(2) --->ARR10   <------NtERF2     <---------ZAT14<------ZmHOX2a(1)------>NtERF2   ---------->DOF2   ccggagggataaggtggcttcgaggtgaatgagagtagagataaggaaggagaagcggcggaagacgccattggaagcggataaagctcacagagtgttc  7573800                                                                            ------>ZmHOX2a(1)                                                                       --------->YAB1                                                                    --------->YAB1                                                                    <---------ICU4                                                                   <---------YAB1                         <------ZmHOX2a(1)                         --------->ICU4                      <---------HSFB2a(2)                        --------->YAB1                      <---------LBD16                           <---------YAB1                      --------->HSFB2a(2)                       <---------AHL20(2)                     <---------ANAC46                          --------->AHL20(1)                <---------CCA1(1)              ----------->GT1 <---------AHL20(2)                <---------RVE1(1)              <----------ID1  --------->AHL20(2)                  --               --------->ARR11(3)    --------->YAB1        <---------AHL20(2)                -------- --ZAT14       <---------ARR11(3)    --------->AHL20(2)   --------->AHL20(2)<----------DOF2 <-------- ->ZAT18     ----------->ARR10     *TSS      ---------->DOF2   <---------AHL20(1)       --------->AHL20(2)   tatctatctgtggattagatatttcgaggaaaaatacaattaaaaaaaaaagaaaaactatataatataataataatcctttttagtgaataaaacaaca  7573900              <---------ICU4             --------->AHL20(2)             <---------ATHB51           *TSS                                 <----------DOF2         <------ZmHOX2a(1)                      <---------DAG2  --------->AHL20(1)                      --------->ANAC46  <---------AHL20(1)                     <---------LBD16  <---------AHL20(2)                     --------->LBD16  --------->AHL20(2)                   <---------LBD16 <---------AHL20(2)                 --------->ARR14(2) --------->AHL20(2)                 <---------ARR14(2) ------->YAB1<---------AHL20(2)    <---------GLK1(1)                              <-------TEIL --->RAV1(1) --------->ICU4 <---------YAB1--------->ANAC58                 --------->REM1(1) --ID1 --------->MYB59      --------->ICU4--------->ANAC58         <---------GLK1(2)                <   aaaataaattaggaaataattaagagcgtcatttttggtatcccgcgcaactttttcttctcagtttcagtttctctacatcgattcatcgattccactc  7574000                                                                          ----------->HVH21                                                                          <---------ETT(1)                                                                         --------->DEAR3(2)                                                                     ----------->HVH21                                                                     <---------ETT(1)                                                                    --------->MYB46(3)                                                                    --------->DEAR3(2)       --------                                        ----------->GT1         ----------->HVH21     <---------YAB1                                 --------->LBD16                <---------ETT(1)    <--------HAHB4   <---------WOX13(1)           <-----------RAV1(2)            ------>ZmHOX2a(2)    --------->ATHB51  <---------ANAC58       <---------HSFB2a(2)                   --------->DEAR3(2)   <---------ICU4  <---------ANAC58       --------->HSFB2a(2)                 <---------ARR14(2)     -------->ATHB1 --------->ATHB12--------->WOX13(1)   <--------P             --------->ARR14(2)    --------->ICU4 ---------YAB1 <------ZmHOX2a(2)<---------LBD16      <------ZmHOX2a(2)   --------->MYB46(3)  <<<<<<<<   tcttgattgctgtttagatcaatccgtctcgaacccaggggttagtatatagtggatcaaactgatccgacccgacccgacccgaattattaatgtcgga  7574100                             --------->ATERF1(1)                             <------NtERF2                            <---------ATERF1(1)                            <---------ERF1                            ------>NtERF2                            <---------ORA47(2)                           <---------RAP2.6(2)                           <---------RAP2.3(2)                           <---------RAP2.3(3)                           <---------DREB2C(2)                           --------->ATERF1(2)                           <---------ATERF1(2)              --------->MYB52(1)                           <---------ANAC46                 <-----------GT1                           <---------RRTF1(3)         --------->HSFB2a(1)------>ZmHOX2a(2)                           <---------RRTF1(2)     --------->DEAR3(1) ----------->HVH21                <---------MYB46(3)               <------NtERF2 ------->GAMYB               <---------AtMYB61               <---------DEAR3(1)   <---------MYB52(1)             <---------MYB46(3)               --------->ATERF1(1)  <---------At4g35610             --            <---------AtMYB61--------->RAP2.3(1)------>NtERF2<---------At5g28300             --------      --------->At4g35610  <---------DEAR3(1)<-----------HVH21--------->MYB46(3)             <------- ->ETT(1)--------->ATHB12 <---------LBD16    <---------ATERF1(1)  <---------MYB46(3)         <------- <<AtTINY2  --------->ALFIN1<---------RAP2.3(1)--------->DEAR3(1) <---------DEAR3(1)     --------->ALFIN1   agttaatgagatgagtggtggttctattggcggcgaattgttgagagcgtcgccgaaggttttaacggccggtgatcggaaattactcaaggtggagctt  7574200                                                                                         ------>NtERF2                                                                                        --------->DEAR3(1)                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                     <---------ALFIN1                                                                                    --------->MYB46(3)                                                                                  --------->ARR14(2)                       <---------LBD16                                            <---------ARR14(2)                      <---------ANAC58                                           ------>NtERF2                      <---------ANAC58                                           <---------ALFIN1                <---------TOE2(2)                                               <---------ETT(1)        --------->CCA1(2)                               <---------WRKY12        --------->ANAC46       <---------ARR14(2)                               <---------WRKY38(1)     ----------->HVH21 <-----------RAV1(2)  <---------ANAC46                 --------->WRKY18(1)     <---------HSFB2a(2) ---->NtERF2    ------->TEIL                        --------->MYB59            --------->HSFB2a(2) ->At4g35610    <---------TOE1(2)                 <--------P                --------->ARR14(2) --At4g35610 <---------ANAC46                 <---------ANAC46              <---------ARR14(2)      - --ZAT2--------->ARR14(2)            <---------YAB1 --------->DAG2        <---------DEAR3(2)------>ZmHOX2a(1)   cggccaggggatacgacgtatgtttcgtggaagaagcttatgagggatgctggtaaggtcaatggtttatcggcttcggttcccgacccgcctcctaatg  7574300                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                                                <----        --------->TOE1(3)                                                                      ------        --------->TOE2(3)                                                                    <-------  --------->TOE2(3)                       <---------REM1(1)   --------->GLK1(1)            <---------ANAC58  --------->TOE1(3)                    <-----------RAV1(1)   <---------ARR14(2)            <---------ANAC46 --------->ZAT6              <---------MYB52(1)<------ZmHOX2a(1)    <---------AHL20(2)     <---------ANAC58 ------->P             --------->ZAT18<---------TOE2(3)      --------->ARR14(2)   <-----------RAV1(1)   ctaaccctaaccttgagtttcgaattgcaccggtgagtttgatgttgtaggaattggtaatcggatatatatacttgtaggcatttgtgggtttcgtttg  7574400  Previous    Next  AGI:  At1g21600.1    Description:  PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6). similar to unnamed protein product [Vitis vinifera] (GB:CAO61920.1) Range:  from: 7571174    to: 7573835    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21610.1    Description:  wound-responsive family protein. similar to wound-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G77310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61919.1); contains domain PTHR16426 (PTHR16426) Range:  from: 7573911    to: 7578945    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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