Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <------NtERF2                                                                   <-------GAMYB                                                                  <---------MYB46(3)                                                                 <---------RAP2.6(2)                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58                         --------->At4g35610                    <------NtERF2                      <---------ZAT2                            <---------LBD16                      --------->At4g35610                       --------->ATERF1(1)                      <---------At4g35610                      ------>NtERF2                     <-----------RAV1(1)                       <---------MYB46(3)                   <---------At4g35610                        <---------DEAR3(1)                    -                   --------->At4g35610                        <---------AtMYB61                     <                   <---------ZAT2                           <---------MYB46(3)                    <--                  <-----------RAV1(1)                <---------ANAC58                           <---- ----ZmHOX2a(1) --------->At4g35610                  <---------ANAC58                      --------->At4g35610 -----TOE2(3)   <---------At4g35610                  <---------ANAC46  <---------ANAC46    <---------At4g35610 ---CDC5        <---------ZAT2                   <-------GAMYB----------->HVH21            <-------GAMYB >ZAT2    <------ZmHOX2a(1)                <---------At4g35610--------->ALFIN1             <------NtERF2 -->RAV1(2)    <-----------RAV1(1)       <---------ANAC46  --------->ALFIN1               <---------DEAR3(2) -At4g35610  <---------At4g35610       <---------MYB46(3)  <---------DEAR3(1)            <---------RAP2.6(2) >At4g35610<---------ARR14(2)       --------->MYB52(2)    <---------At4g35610            <---------DEAR3(1) -ZAT2  <---------TOE2(3)<---------At4g35610    <-----------RAV1(1)--------->ATERF1(1)  --------->RAP2.6(3)   ggaatgtattgaggatgctgctgctgctgctgaagcgatagtggctgatgctgttgctggagcggtggcggatgctggtagtagtttgaagtcggctgat  7565400                     ------>ZmHOX2a(2)                   --------->ARR11(3)                   <---------AGP1                   <---------ARR14(3)                   <-----------ARR10            <---------LBD16           <---------ANAC46                                    <---------WRKY18(1)       <---------ARR14(2)       <---------YAB1                --------->WRKY45       --------->ARR14(2)     --------->YAB1                  --------->WRKY12  --------->MYB52(1)<------ZmHOX2a(2)                         --------->WRKY38(1) <---------ALFIN1  --------->ARR14(3)                        --------->DOF5.7(2) ------->GAMYB     <---------ARR11(3)                      <---------ANAC46                 --------- -------->MYB46(3) --------->ARR14(2)                 --------->YAB1                       --------->AHL20(2) ---------MYB55(2) <---------ARR14(2)                 <---------ICU4                       <---------AHL20(2) ---------GT1    ----------->ARR10       --------->ICU4   <---------TOE2(3)        ------>ZmHOX2a(2) -----WOX13(1) <------NtERF2 --------->ICU4          --------->ICU4     --------------------->WRI1   taaccaccgtattgggcggaagatcttggcgatgatgagagtattgatggaggtaatcttgacgttgaccattgctctgagttgatcgaccatataaatt  7565500                                                      <---------ANAC46                                                     <---------At4g35610                                                     --------->RAP2.3(1)                                                     --------->At4g35610                                                     <---------LBD16                                                     <------NtERF2                                                     --------->ATERF1(1)                                                    <---------RAP2.6(1)                                                    <---------ORA47(2)                                                    <---------ERF1                                                    <---------RRTF1(1)                                                    <---------ATERF1(1)                                                    ------>NtERF2                                                    <---------RAP2.3(1)                                                   <---------RAP2.3(2)                                                   <---------ANAC58                                                   <---------RAP2.6(2)                                                   <---------RRTF1(3)                                                   <---------DREB2C(2)                                                   --------->ATERF1(2)                                                   <---------RAP2.3(3)                                                   <---------RRTF1(2)                                                   <---------ATERF1(2)                                                  --------->ATERF1(1)                                                  <------NtERF2                                                  <---------ABI4(1)                                                 <---------ATERF1(1)                                                 <---------ERF1                                                 --------->ABI4(2)                                                <---------DEAR3(1)                                                <---------AtMYB61                                                ----------->HVH21                                               <-------GAMYB                                               <------NtERF2                                               <---------ABI4(1)                                               --------->ATERF1(1)                                              <---------ATERF1(1)                                              <---------DEAR4(2)                                             <---------DEAR3(1)                                             <---------DREB2C(2)                                             --------->ALFIN1                                       <---------ARR14(2)                                       ----------->HVH21                                      <------NtERF2<---------ANAC46                                      --------->DOF5.7(2)                                   <------NtERF2--------->ALFIN1                                 <---------DEAR3(1)<---------ANAC58                                --------->ATERF1(1)<---------DEAR3(1)                                <------ZmHOX2a(1)------>NtERF2                              --------->ALFIN1<---------DEAR3(2)      <---------HSFB2a(2)    <------ZmHOX2a(1)<---------MYB46(3)                                   --      --------->HSFB2a(2)  --------->ALFIN1 <---------ABI4(1)   --------->At4g35610                <-     <---------LBD16      <------ZmHOX2a(1)------->GAMYB<------NtERF2                          ======  <----------DOF2       --------->ALFIN1--------->MYB52(1)      <---------At4g35610            <----- <---------ANAC58      <------ZmHOX2a(1)<---------DOF5.7(2)   <------ZmHOX2a(1)       =============== <---------ANAC58    --------->ALFIN1 --------->At5g28300   --------->ALFIN1          <------ZmHOX2a(1) >AHL20(2)     <---------WOX13(1)--------->ALFIN1<---------MYB46(3)       <------ZmHOX2a(1)   -------   agggctttcgggatgagattgacgaggaggaggaggaggcggtaacggcggtggcggcggaagaggagcagagggaggatgaagatgaggagagtaagga  7565600                    >>>>>>>>>ARR2                    >>>>>>>>>ARR1                    >>>>>>>>>ARR2                    >>>>>>>>>ARR1                   <------ZmHOX2a(1)                                                  --------->AtMYB61                  <------MYB83                                                        <---------ALFIN1              <------MYB46(1)                                                        --------->MYB46(3)              <------MYB83                                                    <----------DOF2             <---------TOE1(2)                                               ------>ZmHOX2a(2)          ================HOX2a_HOX2a                                       <------ZmHOX2a(2) ------->GLK1(1)  <------MYB46(1)                                           <---------RVE1(1) --------GLK1(1)<--------P                                                 <---------AGP1 ================HOX2a_HOX2a                                               <---------ARR11(3) -ZmHOX2a(1) <---------TOE2(2)                                             --------->ARR11(3) ================HOX2a_HOX2a       --------->GLK1(2)                       --------->AGP1 ---->GT1 ------>ZmHOX2a(2) --------->YAB1                                <---------CCA1(2)   gaattccatggatcgtaggtaggattgtaatgagaagaatccatggctgatttggattttagccttgagaaattttagatcttttgaaccacagcgtcgt  7565700                                   ----------->RAV1(1)                                --------->ANAC58                                <--------------OsCBT                                --------->ANAC55(1)                                --------->ANAC58                                --------->ANAC46                               ------->TEIL--------->MYB52(1)                    --------->At4g35610--------->ANAC58                --------->ANAC58                    <---------At4g35610--------->ANAC58                --------->ANAC58             <                 <---------At4g35610   --------->ANAC46       <---------YAB1           <---------HSFB2a(2)       <---------YAB1       --------->ANAC58              ----------->GT1  <---------ATHB12 *TSS  ---    <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->AHL20(2)--------->ANAC46--------->HSFC1(1) --------------------->WRI1 --------->ANAC58        --------->YAB1   --------->ANAC46  --------->HSFB2a(2)   cttcttcttattcttcgtcttctgatgaaaacgcacgcaacacgaaaacggcgataaaaatagtataatacacacgaatcaatttagttctcgaatcgtt  7565800                      --------->ARR11(3)                      <---------ARR11(3)              <---------MYB52(1)           <------------MYB.PH3(1)         --------->ARR14(2)                                     --------->At4g35610<---------RAP2.6(3)         <---------ARR14(2)                             <------------CBF  <---------YAB1        ----------->HVH21                             <---------YAB1    --------->YAB1             <- <----------DOF2 <-----------TBP                     --------->YAB1    --------->AHL20(2)       <---- ---------GLK1(2)----------------------->TaNAC69(2)  --------->TOE2(3) --------->ICU4<------------CBF -------------->AGL1 <---------CCA1(2)    <----------DOF2      <---------ALFIN1   <---------ANAC46 <-   ccgattttcggtaaccggtttttatatcttcttcgtaactctctcttttccctaatcttattgggccactgcatttattatgggccgtattgtataagtt  7565900                                                             ----------->HVH21                                                       <-----------RAV1(1)                                                      <-------MYC3              --------->ARR11(3)                <---------ARR14(2)        --------->At4g35610                     --------->ARR14(2)                        <---------YAB1        <---------At4g35610                    ------>MYB83--------->At4g35610      <-------TEIL <---------MYB52(1)                          <---------MYB59<---------ANAC46    <---------------AtSPL8 --------ANAC58                            -------->P ------->MYC3              --------------->AtSPL8 -------GT1   --------->GLK1(2)    <-------TEIL------>MYB46(1)           --------->AHL20(2) --------- --------ANAC58     <-----------HVH21  --------->ARR14(2)  <---------At4g35610 --------->ALFIN1   tccgttcttcagctaaaatctgtgtcaattgtctagattcaaatctaccaaatacacatgttgctgacacaaaaaaaaaatgtgggtacattatcaaaga  7566000                           --------->WRKY18(1)                  <-----------GT1               --------->ATHB51               -------->ATHB1               <---------ICU4              --------->AHL20(2)              --------->AHL20(1)                                        --------->AHL20(2)              <---------AHL20(2)    <----------DOF2           <----------ID1              <---------YAB1  <---------YAB1      ---------->DOF2  ----------->GT1      --------->YAB1      <-----------HVH21      --------->YAB1<------ZmHOX2a(1)       <---------At4g35610     <---------YAB1      --------->LBD16        <---------ATHB12   --------->ANAC58    <---------CCA1(2) ->DOF2       --------->ICU4  --------->ICU4  --------->WOX13(1)   --------->ANAC58<-----------HVH21   attagttatcagaaaaattattacatccggtcatgtttctttcaaactcaatcaaagtttgaataggacaagaaaaaaatacttatgtcatctcttacca  7566100                                                                             >>>>>>>>>ARR1                                                                             >>>>>>>>>ARR2                                                                           <---------TOE2(3)                                                                           <---------YAB1                                                                    <---------ARR11(3)                                                            <---------WOX13(1)   <---------YAB1                                                         <---------TOE2(3) <---------TOE1(3)                                                         <---------YAB1<----------DOF2                       ------->MYC3                  --------->YAB1 --------->ARR11(3)        <---------WOX13(1)                          <---------YAB1  --------->GLK1(2) <---------YAB1        <-------MYC3            <---------ZAT6  ----------------->AGL1   catattatagattgactcagtcgcatatggttttgtcttccaaattatagagttatgataagattgccaaaatctttaagattgtgataggcactctcga  7566200                                                        <-------MYC2       --------->ANAC58                                        --------->YAB1  <-------MYC3  --------->ANAC58             <-                            ----------->GT1             ------->MYC3  --------->ANAC58         <-----                           <---------TOE2(3)            ------->MYC2  --------->ANAC46<----------DOF2                        <---------ARR11(3)             --------->ANAC58    ----------->GT1  =========  ----------->GT1       --------->ARR11(3)             --------->ANAC58    --------->ANAC58 ------>ZmHOX2a(2)   atatatgtaaaattgtatttcaacaagataatgttattctattgataacagtgagacacgttcgagcattacaagacaagaaaattcactttgatccatt  7566300  Previous    Next  AGI:  At1g21580.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to Subtilisin-like serine protease [Pediococcus pentosaceus ATCC 25745] (GB:YP_803612.1) Range:  from: 7560554    to: 7565792    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21590.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G77280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61925.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain UspA; (InterPro:IPR006016) Range:  from: 7566221    to: 7569891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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