Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <-----------GT1          --------->AHL20(2)      --------->AHL20(2)          <---------AHL20(2)    --------->TOE2(3)                                    --------->ATHB12    --------->YAB1        --------->YAB1               --------->AHL20(2)           <---------YAB1 -------->GT1       <-----------GT1   --------->AHL20(2)             <-------TEIL<---------MYB52(1)   tggtaaacatatttaaacaattttacaaatataacataaatttaacaccgatttgaattaaaacagcccggtccatttagcccgttttgatttgagaaga  7530600                                                    <---------ARR14(2)                <---------MYB46(3)                  --------->ARR14(2)               <--------P                       <---------ZAT18              <-------GAMYB                <---------YAB1        <----------DOF2                  --------->RVE1(1)        <---------ICU4       <----------DOF2            <---------HSFB2a(2)             --------->YAB1       <---------DAG2             --------->HSFB2a(2)         <---------AHL20(2)                <----     ---------->ID1            <----------DOF2  <---------LBD16  <---------ATHB12      --------->GLK1(1)   gtgttttggccttttgggttgatgaacaatgtgcttttggaaaatatcagtgcggattggatttttaatcatcgacacaaacacttaagaaatctaatct  7530700                                                                                                   <-                                                                                       --------->AHL20(2)                                                                                       <---------ICU4                                                                                    <---------AHL20(2)                                                          --------->YAB1           <---------AHL20(2)                 <-----------GT1                        --------->ANAC58           --------->AHL20(2)            <---------YAB1                    --------->AHL20(2)                  <---------WOX13(1)          ----------->GT1    --------->AHL20(2)         --------->ANAC58       <---------YAB1 =======    ---------->DOF2          <---------AHL20(2)   <---------AHL20(2)         <----------DOF2  ------- -----------AtSPL8        --------->YAB1      <---------AHL20(2)      --------->TOE2(3)<---------AHL20(2)   agtacaaaaagattgtaattcactctattcataaattggttttgatatatatataaacaagcataacaacattcttagactttgattaattttttccaac  7530800                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                        --------->LBD16         <----                                                                      <---------At4g35610       -----                                                                 ----------->HVH21             <-----                                                             <------NtERF2                     <-----                                                            ------>NtERF2                      <-----                                                            ----------->RAV1(1)                ------                                                          --------->At4g35610                  <-----                         <---------WOX13(1)              <---------ATERF1(1)                  <------                       --------->ATHB12                ----------->RAV1(2)                    <------                      <---------AHL20(2)              <---------ATERF1(1)------>NtERF2        <------               --------->TOE2(2)                     <---------ARR14(2) ------>NtERF2         <------               --------->TOE1(2)                    <------ZmHOX2a(1) --------->At4g35610     <------              <---------At4g35610                   --------->ATERF1(1)<---------DEAR3(1)     -------              --------->At4g35610      --------->ANAC58--------->ATERF1(1)<---------DEAR3(1)  <------              --------->ZAT2    <---------ARR14(2) <---------ATERF1(1)<---------LBD16         <------ --------MYB52(1)     --------->AHL20(2) <------ZmHOX2a(1)<---------LBD16<------NtERF2        <------ =========================RAV   --------->ARR14(2)--------->ALFIN1 <---------At5g28300  --------->GLK1(2) ---->RAV1(1) ----------->RAV1(2)      --------->ANAC58=================RAV         <------ZmHOX2a(1)   agttatctatttgatcacctgcgattaattggtggaactgcaaggacgacgggaggagcctgcggcagtgaccgcggcgatggagaggagagtctggcgg  7530900       <---------DEAR3(1)    --------->DEAR3(1)  --------->ZAT2  <---------ZAT2  <---------At4g35610  --------->At4g35610 ----->TGA1a ----->O2 ------ANAC46 ------ANAC58 ------ANAC58 ------TGA1a ------O2 --NtERF2 ---->ATERF1(1) ----ERF1 ----ORA47(2) ----RAP2.3(1) >NtERF2 <-----------HVH21 ----RRTF1(1) ---RAP2.3(2)                                                                --------------->AGL15 ---DEAR3(1)                                                                 <---------------AGL15 ---RRTF1(2)                                                  --------->ANAC46 ---RAP2.3(3)                                                 --------->ANAC58      ----------->GT1 ---RAP2.6(2)                                                 --------->ANAC58  --------->DAG2 -->ATERF1(2)                                               ---------->DOF2 <-----------------AGL3 ---RRTF1(3)                               <---------------AGL15       <---------REM1(1) ---ANAC46                                 ==================================================MADS_MADS ---ATERF1(2)     <------ZmHOX2a(1)------>NtERF2        ----------->GT1----------->GT1   cgtgagcagccggtgagagaggaacgagtgaatgtgccaccatggctaattcaagaaaatgtaaaagcaagagatgtaacaaaaattggtaaacacacta  7531000                                                           <--------P                                                         --------->ATHB12                                               <---------ANAC58                                          --------->ARR11(3)   <---------ARR14(2)                                          --------->ARR14(2) <------MYB46(1)                                          <---------ARR14(2) <------MYB83                                         <---------CCA1(2)<---------ANAC46                                       --------->AHL20(2)--------->MYB55(2)                     <---------REM1(1) <---------AHL20(2)<---------MYB46(3)                    <-----                  <-----------RAV1(1)<-----------TBP  <------------CBF                      <--------              *TSS<---------ZAT6 ------------>CBF    --------->ATHB12                     <---------YAB1          --------->ALFIN1    <------------CBF <---------ANAC58--------->ARR14(2)     <---------GLK1(2)   atagaagatagagtgggatagtgttgtagtagcattgcaatttatatctgcttgttcattggttggatttggataagacatcaaaatagattattttttt  7531100                                                                                              -------                                                                                             --------         --------->AHL20(2)                       <----------DOF2                         --------->SPL7       --------->ANAC58    <---------GLK1(1)      <---------------AGL15              ------->TEIL       --------->ANAC58    --------->GLK1(1)     --------------->AGL15             <---------ABI4(2) --------->ETT(2)       --------->ANAC58  <---------ANAC58                        --------->ANAC58 <---------ETT(2)       --------->ANAC46  <---------ANAC58         <----------DOF2--------->ANAC46 ------GT1              --------->ANAC58  <---------ANAC46      <---------ALFIN1  --------->ANAC58 -AHL20(2)         <----------DOF2       ------>NtERF2<---------AHL20(2)        ---------->DOF2 <----   ctgtctaccaagaaaataagactttcaagaaatccaaaaacgctgcgttttcctttttaatgaacaacactttcaaggtccaaaacgcaccgtatgtcgt  7531200                                                                                                    -                                                                                                    <                                                                       --------->AHL20(2)     <------                      <---------YAB1                                   <---------AHL20(2)     <------                      <---------AHL20(2)                 --------->CCA1(2)                    -------                  <----------DOF2                       --------->ARR11(3)                    <------                  <---------DAG2                        --------->ARR14(2)                    ------- ---->GT1<---------ANAC58                 --------->HSFB2a(2)      <---------YAB1            -------- -->ID1  <---------ANAC58              <----------DOF2  <---------ARR14(2)                   <------- -----MYB52(1)<---------ZAT18     <----------DOF2       <---------ARR11(3)                   <-------   tattctgtttttcttgttcgctttttaattgcatttcttttcttttagaatttttgaagatttgaaagtataattttttaaaaaaaaacatggcaataat  7531300      --------->LBD16      <---------MYB52(1)     --------->ANAC46 -------->At4g35610 ---------At4g35610 --ATHB1 --HAHB4 -->YAB1                                                                                    ------>ZmHOX2a(2) ---ICU4                  --------->AHL20(1)                                   <---------YAB1 -->ATHB51                <---------ARR11(3)                               <---------ANAC55(2) ->ICU4                   <---------AHL20(1)      --------->DAG2          --------->MYB59 --------->ARR11(3) --ATHB51<---------At4g35610               ----------->GT1           --------->DAG2       <---------ARR11(3) --ATHB12--------->At4g35610      ---------->DOF2---------->DOF2    ---------->DOF2     <---------YAB1   taagctcccgtagctgtattcaatccaaaatatttcaaaagcatacagataaaaagtagactttgaaaaaaaaagttaagtatgagagttatgatctact  7531400                                                             --------->ARR14(2)                     -             ------>MYB46(1)                                 <---------ARR14(2)                     -             ------>MYB83      --------->ALFIN1             <---------CCA1(2)                    ----           --------->TOE1(2)--------->DAG2              ----------->RAV1(1)                     <---- --------->YAB1            ---------->DOF2             --------->ANAC46                 ------->GAMYB <---------ICU4        ---------->DOF2               --------->ANAC46                ----------->RAV1(1)   tgatcatcacaaacctacaataaacaaaagaaagtgggaattgtctcaaacaattacacaacatatctgtttacacaaacacatcttcaacagaaacaat  7531500  Previous    Next  AGI:  At1g21500.1    Description:  similar to hypothetical protein OsI_030994 [Oryza sativa (indica cultivar-group)] (GB:EAZ09762.1); similar to Os09g0517000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063677.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33829.1) Range:  from: 7529871    to: 7531014    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21510.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93661.1) Range:  from: 7531301    to: 7532618    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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