Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ANAC46                       <---------ICU4           --------->GLK1(1)    --------->ARR14(2)               ------>ZmHOX2a(1)        --------->ARR11(3)           <---------GLK1(1)    <---------ARR14(2)              --------->TOE2(3)         --------->GLK1(2)     --------->MYB52(1)  <---------ZAT14      <---------GLK1(2)--------->YAB1            <---------GLK1(2) ----->ATHB12            --------->ZAT14    <---------YAB1    <---------YAB1         ---------->DOF2   cattggataagggataccagagaattgttcagtggatttgttcttgatgattctcttgaatgttatcctaatttcattcacgaacaaaaaagaatcttga  7513000                                                                                         --------->ANAC58                                                                             --------->SPL7                                                                           --------->TOE2(2)                                                                           --------->TOE1(2)          --------->LBD16                                                  <---------SPL7--------->ANAC58         --------->HSFB2a(2)                                              <---------ANAC58         <---------HSFC1(1)                                               --------->ANAC55(2)         --------->HSFC1(1)                       <-------TEIL            <---------ANAC58  ---------         <---------HSFB2a(2)                      --------->ZAT14         <---------ANAC55(2)        ----------------->AGL1         --------->YAB1                    <-------TEIL ===============        <---------LBD16 --------->ANAC58          <---------ZAT18  ----------->GT1    ---------------      <-----------GT1   --------->ANAC58          <---------ZAT14<---------ZAT14   <------ZmHOX2a(1)   gttttttttttccagaacagaacaacaagaaatcgaaagaatcataaatcggttcactatagaagagagaagtgatacgtacgaaggagccaagaaaaga  7513100                        ----------->GT1                 --------------->AGL15                 ----------->GT1                 ------>ZmHOX2a(1)                 <---------------AGL15               <---------ANAC46             --------->ARR14(2)      --------->At4g35610  ----------->GT1   --------->ZAT14     --------->DAG2   <---------ZAT14    ---------->DOF2 ->DOF2      <---------ARR14(2)          --------->MYB52(1)                                  -------- ================================MADS_MADS             <---------ZAT18             ------------------ -->AGL3    <---------GLK1(1)     <----------ID1       --------->ZAT14         ---------->DOF2  -----   aacagagcagttgcatttcctgtaaaaagtagaaaaacgacaaaaacggattagtagtactctcagtgatttctcatggaagaaagacgaagaagataga  7513200                                                   <---------ZAT6                                               <---------ARR11(3)                                               --------->ARR11(3)                           ---------                                          --------->DEAR3(1)                                <--------                                       <----------ID1                                <------NtERF2 ->CCA1(2)        <------ZmHOX2a(1)  ---------->DOF2                          ---------->DOF2-------- ------>ANAC81  <---------TOE2(3)   <---------ARR14(2)              <----------DOF2--------->ALFIN1<- ----->DOF2  --------->ALFIN1       --------->ARR14(2)         <-------TEIL------>ZmHOX2a(2)<--------   aagacagagagagaggttgaggaaatgagttgctaccgaaaacgccgaagatagtgtgagcgatgttcatcttttgatctcaaaggtggctaaagattct  7513300      <---------ANAC58      <---------ANAC58                                                                            ---    <-----------GT1         --------->DAG2        *TSS                                           <--- >ARR11(3)                 ---------->DOF2  <---------At4g35610                     <-------TEIL<---- -ARR11(3)       <---------At4g35610        --------->At4g35610                    --------->GLK1(2) ->GLK1(2)       --------->At4g35610  --------->GLK1(2)                <-----------TBP  <---------ANAC58 ---------DOF2   <---------ZAT2       <---------ARR14(2)              <---------ARR14(2)<---------ANAC46 -GLK1(2)        --------->ZAT2       --------->ARR14(2)              --------->ARR14(2)<---------ANAC58   tctttttttcttgttcgtaagctgagagagaaagtgagagaatatgagctaagtgttttctatcggcaagcgtatatatatcgagattcagcgtgtgtta  7513400                                --------->AHL20(2)                               --------->AHL20(2)                        <-----------GT1                    --------->MYB52(1)                     <--------ATHB1                        <---------ICU4                     --------->YAB1                        --------->YAB1                     <--------HAHB4            <---------AHL20(2)                     <---------ICU4            <---------AHL20(1)   --------->ZAT14   --------->ATHB51          --------->AHL20(2)          <---------AHL20(1)   <---------ZAT14  <---------ATHB51           --------->AHL20(1)          --------->AHL20(2)  <----------DOF2   <---------ATHB12        --------->YAB1--------->ICU4   <---------AHL20(2) ------>MYB46(3)    --------->ICU4   ---------->DOF2 <---------YAB1 <---------AHL20(2)             <- ------At5g28300    --------->AHL20(2)     <---------YAB1 <---------ATHB51--------->AHL20(2)     ---- -------GT1     ------------>CBF<---------AHL20(2)--------->ICU4   --------->AHL20(2)   <-------TEIL   accgcttcactgtggaacaccaataattacaaaattaataaaagtataataaattatgaaataatggtattaaatattaaattttaaaaatacatggttc  7513500    <---------AHL20(2)              --------->DAG2   --------->AHL20(2)       ----------->GT1   <---------AHL20(2)  <---------AHL20(2) <---------TOE1(3)           --------->TOE1(2)  <---------YAB1      <---------AHL20(2)  <---------TOE2(3)           --------->TOE2(3) --------MYB52(1)     --------->AHL20(2)  <---------YAB1              --------->TOE2(2)  <---------AHL20(2) ------->GT1     <---------YAB1    ---------->DOF2     <---------TOE2(3)       <---------AHL20(2)   tgttattaatttttgtagtatgaataaaatttgaaaaaaaagttatggttaagaactaatgttttgagaaaacctaagttttaaatttgagttaattgag  7513600                                                                               <---------AHL20(2)                                                                              <---------AHL20(1)                                                                           ------>MYB83                                                                         <---------MYB59  <---------TOE2(1)                                                                 <---------ANAC58    --------->HSFB2a(2)                             <---------YAB1                      <---------ANAC58    <---------HSFB2a(2)                             --------->ICU4                    <-----------GT1<---------AHL20(2)                             <---------ATHB12             <---------GLK1(2)------>MYB46(1)<---------TOE1(1)                    --------->DAG2                        --------->ARR11(3)  --------->AHL20(2)                   ---------->DOF2                        <---------ARR11(3)  --------->AHL20(1)         <---------AHL20(2) <---------TOE1(2)<---------ZAT6<---------RVE1(1) --------->AHL20(2)   ttatttcttatataaaaaaaaaaaagttcccatgattttgaattctagtgtatatatacagattttttcttgataccaaattaatttttggaacgaggtt  7513700                        ==================================HOX2a_HOX2a                   <---------ANAC58                   <---------ANAC58                                                           <------                   --------->ANAC55(2)                                                        -------                 <-----------GT1                                                              =======         <---------ANAC58                                                                    <-------         <---------ANAC58                                                           ----------->GT1         <---------ANAC46 <---------HSFB2a(2)                                    --------->CCA1(2)         <---------ANAC55(1)         <---------MYB59                            <---------ARR11(3)         --------->ANAC55(2)        ----------->RAV1(2)     <----------DOF2     --------->ARR14(2)         <---------ANAC55(2)       ------->TEIL        --------->HSFC1(2)       <---------ARR14(2)        --------->MYB52(2)--------->HSFB2a(2)      ------>ZmHOX2a(2)            --------->ARR11(3)      <---------MYB52(1)------>ZmHOX2a(1)        --------->ARR14(2)             --------->ARR11(1)   ttttatctgttacttgtttttacgtcctcgagaggtgaacctgactctttggatcgacgtttcttttgtagatagttatagagatatggttaaatactta  7513800                                                                                                  <--                              <----------DOF2                                                    <---              --------------->AGL15                                                            ------              <---------------AGL15                                         --------->ANAC58  <------  --------->AHL20(2)        <------------------------ANAC81        <---------AGP1    <---------ZAT14 ---------AGL15            <---------ARR11(3)                --------->DAG2 --------->ANAC58 <------- -------->AGL15  ---------->DOF2      <----------DOF2       ---------->DOF2 --------->ANAC46 <------- =============================MADS_MADS                   <---------------AGL15      --------->ZAT18 --ANAC55(2)  ============================================================MADS_MADS  --------->ZAT14   aaaatgaaataaacacctaaaaagagcaatgtcttttcttcttttgttttttgtttgatactaaaagtagctctgaacaagccagagtgttctgggcttg  7513900  Previous    Next  AGI:  At1g21460.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G10850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60898.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 7511839    to: 7513350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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