Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->GLK1(1)                           --------->ARR11(3)                        <------NtERF2                       --------->LBD16                      --------->DEAR3(1)                     --------->RAP2.3(1)                     <---------LBD16                     --------->ATERF1(1)                     <------NtERF2                    ------>NtERF2                   --------->RAP2.3(2)                   --------->ATERF1(2)                   --------->RAP2.3(3)                       <---------ANAC58                   --------->DEAR3(1)                        --------->O2                   <---------ATERF1(2)                       <---------bZIP60(2)                  --------->MYB46(3)                         =================bZIP_DOF                  --------->DEAR4(2)                         <---------ANAC46  --------->O2                  --------->ERF1                             <---------ANAC58  <---------O2                  --------->RAP2.3(1)                        <---------O2      --------->TGA1a                  --------->DEAR3(2)                         --------->ANAC55(2)                  --------->ATERF1(1)                        <---------TGA1a   <---------ANAC46                  --------->RRTF1(1)               --------->MYB46(3)      --------->DEAR3(2)                  --------->RAP2.6(1)              <---------ATHB12<----------DOF2          <------ZmHOX2a(1)                 --------->ZAT2                   =======================================MYC_MYB                 <---------ATERF1(1)              =====================MYC_MYB <---------bZIP60(2)                 <---------ZAT2  ======================================MYC_MYB <---------TGA1a <-----           --------->MYB52(1)    -------->P       -------->P --------->TGA1a----------->HVH21--------        --------->At4g35610<---------ARR11(3)    --------->WOX13(1)======================bZIP_DOF ---GT1------->GAMYB<---------ATERF1(1)       ------->TEIL   <---------ANAC55(1) --------->ALFIN1 <--   tctctgtaacagcaaaccgagccgccggagatatcaacccatgagatgtatcaaccattgttgacgtgtcttttggttccgacgtggatgaagaggagga  7464900        --------->ALFIN1        <---------ANAC46                                               ----------->GT1         <-----      <---------ANAC46 <---------WRKY18(1)                      --------->ALFIN1            <--------   <-----------RAV1(1)----------->HVH21 >>>>>>>>>>>>>>>>>LFY    <---------ANAC46--------->HSFB2a(2) -ZmHOX2a(1)  --------->ALFIN1    <---------O2                <---------ANAC58  <---------HSFB2a(2) ->ALFIN1  <---------AtMYB61<-----------HVH21                 <---------ANAC58 <---------LBD16 ------ ----ZmHOX2a(1)  <---------TOE2(3)<---------TGA1a    ----------->GT1<---------AtLEC2    <---------At5g28300   ggatgatgttgtggaggtagaggtttgacctgtgagacgttggaccaatgtcatgaagttattagggtgtgtatggataattctgggagttactgtgtat  7465000                                                                               --------->ATERF1(1)                                                                              <---------RAP2.6(1)                                                                              <---------ORA47(2)                                                                              <---------DEAR4(2)                                                                              <---------ERF1                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                              <---------RRTF1(1)                                                                             <---------ANAC58                                                                             <---------DREB2C(2)                                                                             <---------ANAC58                                                                             <---------ATERF1(2)                                                                             <---------DEAR3(1)                                                                             --------->ATERF1(2)                                                                             <---------RAP2.3(2)                                                                             <---------RRTF1(3)                                                                             <---------RAP2.3(3)                                                                             <---------RRTF1(2)                                                                          --------->ALFIN1                   ------>NtERF2                                          <---------AtMYB61                   --------->ATERF1(1)                              <---------ANAC58                  ------>NtERF2                                     <---------ANAC58                 <---------RAP2.6(2)                                <---------ANAC46  --------->ALFIN1                 <---------PCF2                                     <---------ANAC55(1)<---------MYB46(3)                 --------->ATERF1(1)                             <--------P  <---------RAP2.6(2)            <---------ZAT2                                      <-------GAMYB<---------ANAC46            --------->ZAT2                                     <---------MYB46(3)------>NtERF2       <---------PCF5 <------NtERF2  <---------ANAC58         <---------TOE2(3)--------->RAP2.3(1)      ----------->HVH21              <---------ANAC58         <---------AtMYB61<------NtERF2<--------    <---------ANAC55(2)            --------->ARR14(2)       <---------MYB46(3)<---------RAP2.3(1)    --------->O2--------->ATERF1(1)<---------ARR14(2)     <-------GAMYB   ----------->HVH21 <--------    --------->ANAC46<------NtERF2--------->HSFC1(2)      --------->MYB55(2) <---------ABI4(1)    --------->ANAC55(2)          --------->HSFB2a(1)     <---------MYB46(3) --------->ATERF1(1)    <---------O2<------NtERF2    <---------HSFC1(2)  <-----------RAV1(1)--------->ALFIN1 <---------RAP2.6(2)   <---------LBD16<---------DEAR3(1)<---------MYB46(3)  <---------AtMYB61 <---------DEAR3(1)<-------- ----ARR14(2)  <---------MYB46(3)<---------DEAR3(2)  <---------AtMYB61  <-----------RAV1(1)<------NtERF2 -ANAC46  <-----------RAV1(2)    <---------MYB46(3)--------->MYB52(2)--------->LBD16  <---------ZAT6 --->ARR14(2) --------->ALFIN1  <---------DEAR3(1)<---------AtMYB61<---------LBD16    <---------AtMYB61   atgttcacgggaccaggtgggggccgagattgcgacggttcttgctgatgggtttgtggtggttgtggttgcgggtgtggcggcgctagtggtggcttct  7465100                    --------->ANAC58                    --------->ANAC46                  <---------ALFIN1                 <---------REM1(2)              --------->GLK1(1)             <---------ARR14(2)             ------->TEIL<----------DOF2             <-----------ARR10                                   ------>ZmHOX2a(2)             --------->ARR14(2)       <------MYB46(1)          --------->ARR11(3)             --------->GLK1(2)        <---------MYB46(3)  ------>ZmHOX2a(1)  --------->ARR11(3)--------->ANAC58  <------MYB83        ==============HOX2a_HOX2a     --------->ARR14(2)  --------->GLK1(2)<---------LBD16   <---------AtMYB61    ======================HOX2a_HOX2a -ANAC46     <---------ARR11(1)     <--------P--------->PCF2   <---------ARR11(3)       <---------ARR14(2) -ANAC58    <---------CCA1(2)     <---------ANAC46    <-----------GT1          <-----------GT1<------ -ANAC58    <---------ARR14(1)    --------->ALFIN1<---------TOE2(2)      <------ZmHOX2a(2)    <------   tgataatcttgtgcgaatctccacggactttcagtggtgttggtttcggacccatgtttcctcttgatcttggcgatctattatccatagaatccacttt  7465200                                                                   <---------ICU4                                                                   --------->ATHB12                                                                  <---------YAB1                                                                  --------->ICU4                                                             <---------ANAC55(2)                                                             --------->ANAC55(2)                                                        --------->YAB1                                                        <---------ICU4                       --------                                                        <--------ATHB1                       <-------                                    <---------YAB1      --------->ATHB12                     <------- --------->At4g35610             <---------YAB1        --------->ICU4                    --------->AHL20(2) ---DAG2                 ------->TEIL  ------->TEIL    <---------ATHB12                  <---------AHL20(2) ----DOF2        ------->TEIL    --------->ICU4        <---------YAB1       --------------->AtSPL3   atgagatgaatagtatatgtatatgtgtatgtgtgatgatgaatttagtgaagaacaatgattatgtgatgattaggggaagtacttgtatatatataat  7465300                                              <---------ARR11(3)                               ------                                              --------->AHL20(1)                               <-----                                              <---------AHL20(1)                              <------                                             <-----------TBP                         <---------ZAT14                                        ----------->GT1                              --------->ZAT14                                       --------->ANAC58                              <-------TEIL  --                                       --------->ANAC58                --------->ANAC58      --------                                      --------->SPL7                   --------->ANAC46   --------->ANAC58                                      <-------TEIL                     --------->ANAC58   --------->ANAC58                                   <------MYB83----------->TBP    ----------->HVH21  --------->ZAT18 ->AHL20(2)                        <------MYB46(1)          ------->TEIL             <---------ZAT18 --YAB1                  <---------ALFIN1------------>CBF <---------ETT(2)       <---------------AtSPL8 --AHL20(2)           *TSS        <---------------AtSPL3  <---------ZAT18    ---------->DOF2<--------   tagagaaaaataagacaattcaaactcacacatcgataggtacggcaatatataaacctgtggacctcatgacacacaaaaaagaagtacacaagataca  7465400                                      --------->YAB1                                      <--------ATHB1                                      <---------ICU4                                     <---------ATHB12                                     <---------ATHB51                                     --------->ICU4              >>>>>>>>>MYB98 --->ANAC55(2)                  --------->ANAC58             <----------DOF2                      <-- ----ANAC55(2)                  --------->ANAC58    --------->YAB1                        --------->ANAC58 -TEIL                          --------->ANAC46  --------->ANAC58                        --------->ANAC58 ------->GLK1(2)               --------->HSFB2a(2)--------->ANAC46                     <----------ID1 ->CCA1(2)             --------->GLK1(2)   --------->WRKY18(1)   <---------TOE2(3) ---------->DOF2<-- -ARR11(3) ---------->DOF2     <---------HSFB2a(2)--------->ANAC58        --------->YAB1--------->CCA1(2)   taatctgcaactacaaagcatagataatctgttccagcaatgatggtcaaacactcaaaacctctttaacatagcatcatatttagaaagagacgaaatg  7465500                                                                                                  ---                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                       <-------TEIL                                   <-----------GT1                                       ------->TEIL                                 <---------MYB52(2)                                 <-------TEIL                                      --------->ANAC58                                 ------->TEIL                                      --------->ANAC58                             <---------------AtSPL8                                --------->ANAC55(1)          <---------YAB1     ------->TEIL                                   --------->ANAC46<-------- -------TOE2(3)              --------------->AtSPL8                      -------->P--------->ANAC46 -------TOE1(3)           <---------YAB1     <-------TEIL     ----------->GT1  --------->ANAC46   <--   aaggtttattttctcattaacttagaatatgaatgtacatgtacatgttcatatacaagatagaatgtaaaaaactaccctacacaagtaacaagctctc  7465600                                                             --------->LBD16                                                            ------->GAMYB                                                            --------->ANAC58                                                            --------->RAP2.6(2)                             <-------TEIL        <---------ARR14(2)                       <---------ANAC46          --------->ARR14(2)                     <---------ANAC46         --------->HSFB2a(2)                     =============== ------>ZAT14       --------->ALFIN1      <----------DOF2   --------->ANAC58          <------ZmHOX2a(2) -ARR11(3)        <-----------RAV1(1)   <---------YAB1     --------->MYB46(3) ---------->DOF2   ----- -------ZAT14--------->TOE2(3)   <-------TEIL <---------HSFB2a(2) --------->YAB1  --------->ALFIN1   tatactactctaatacatcaatgtggtgggatacatacacttatctttacagaaccgttcaaccgcaaacataatttgaacaaagtggatcaagactcct  7465700                                                                                              <------         --------->ZAT14--------->ANAC58                                                   --------->YAB1         <---------ZAT14--------->ANAC58            <---------YAB1            --------->TOE2(2)     <---------------AtSPL8   <-------TEIL       <---------ARR14(2)           --------->TOE2(3) ==HOX2a_HOX2a          --------->ANAC46  ---------->DOF2                     --------->TOE1(2) ----- ->ZmHOX2a(1)       <-----------GT1     <---------------AGL15    --------->AtLEC2        --------->GLK1(2)   ataaacaatagtacagagcaattttcaagacatacatatatactaaaagaagttctgaataagagccatacaaaatgaaacctaagaagagaatcatatg  7465800  Previous    Next  AGI:  At1g21320.1    Description:  nucleic acid binding / nucleotide binding. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT1G21326.1); similar to RNA-binding protein [Medicago truncatula] (GB:CAD48198.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain VQ (InterPro:IPR008889); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 7462822    to: 7465322    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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