Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ARR11(3)              <---------ARR14(2)              --------->ARR14(2)              --------->AGP1             <---------At4g35610             --------->At4g35610         --------->AtLEC2     <---------ARR11(3)     --------->ARR11(3)    -------->HAHB4    <---------ICU4                                                      --------->ARR14(2)    --------->YAB1                                           <---------ZAT2  <---------At4g35610   --------->ICU4                                     --------->MYB52(1)<---------ARR14(2)   <---------YAB1                              <------ZmHOX2a(1)        --------->GLK1(2) --------->YAB1      --------->YAB1        <------ZmHOX2a(2) --------->ZAT2<-----------RAV1(2) <---------ICU4     <---------ATHB12      --------->ARR11(3) --------->At4g35610 ------>TOE2(3)<------ZmHOX2a(2)         <---------GLK1(1)   <---------At4g35610         --------->MYB52(2)   cgataatgatcatgcagatccaatgaaaatgggagagatagagagatcaggaaaacaaaccgaagctgaagccgaatccagatgatgacattagttgttt  7377700                                                          <-------TEIL                                                          ---------->DOF2                                                         --------->CCA1(2)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                       <---------At4g35610                                                       --------->At4g35610                                                    --------->TGA2(2)                                                   <-----------TGA1                                                   <-----------HVH21                                                  <---------TGA2(1)                                                  --------->bZIP60(1)                                                  <---------bZIP60(1)                                                  --------->TGA2(1)                                                  <---------TGA1a                             <---------ANAC58     --------->ANAC46                             <---------ANAC58     --------->O2                     <---------ZAT2               <---------O2                  ==========================================MYC_MYB                  ------->GAMYB <-------TEIL      --------->TGA1a                          <---------               --------->MYB52(1)                 --------->bZIP60(2)<---------ANAC58      ----------            ------>ZmHOX2a(2)<---------ANAC46     ===================bZIP_DOF             <----------        <---------YAB1    <---------MYB52(1)      ===================bZIP_DOF             <----------      <---------ICU4 --------->GLK1(1)          ------>NtERF2<---------At4g35610          <----------      --------->YAB1 <---------At4g35610       --------->DEAR3(1)    <---------ANAC58     <----------     --------->ICU4  --------->ZAT2            ----------->HVH21 <---------MYB52(1)    <----------DOF2   attagccatgatgatcccaacggagctcgttacgttcatagcccatgctccgacgtcagatacagccgatggcttcttctcgttctctgctttctccatt  7377800                                                                             --------->AHL20(1)                                                                --------->LBD16                                                               <---------HSFB2a(2)                                                               --------->HSFB2a(2)                                                              ------>ZmHOX2a(2)                                                              <---------LBD16<---------AHL20(2)                                                             --------->CCA1(2)                                                             --------->ARR14(1)                                                             <------ZmHOX2a(2)        --------->AHL20(2)                                  --------->ARR14(2)        <---------AHL20(2)                                  --------->ARR11(3) ------AGL15                                                --------->AGP1   <---------AHL20(1) ----->AGL15                                                <---------ARR14(2) -------AGL3                                                <---------GLK1(2)<---------ARR11(3) -------AGL1         <---------GLK1(1)                     <---------At4g35610<---------CCA1(2) -------AG  <---------AHL20(2)                            ----------->ARR10  --------->ARR11(3) -------AGL2--------->AHL20(2) --------->YAB1   ----------->RAV1(1)    ----------->GT1           ----   tggattcaaattaaaaaaattcgaaatctgaaatcagaaccaattggttccaacacaattcagatccggaagagagtaatatatctgaaaatggtggaat  7377900                                                     <----------DOF2                                                --------->SPL7                                               <---------ARR14(2)                                               --------->ARR14(2)            --------->ANAC58                                               <---------MYB52(1)            --------->ANAC58                       --------->ALFIN1       <---------SPL7        --------->LBD16 --------->DAG2           <---------At4g35610            --------->ANAC46          ------>NtERF2  ---------->DOF2        <------ZmHOX2a(1)                 --------->ANAC58         --------->RAP2.6(2) ----------->GT1 ----->YAB1--------->At4g35610            --------->ANAC58<---------ANAC46 ---------->DOF2   caaaatcggaggaagatgagacaatgtggagaacaatgcgaatcacgccgttcggcttcttcgtggaagccgcgaagaaaagccaaaaagcgtagaaaca  7378000             <---------CCA1(2)            --------->ARR14(2)                                                           --------->YAB1            ------->TEIL                                                              ---------------            <---------ARR11(1)                                                  <---------TGA1a   <--            <---------ARR14(2)                                             --------->ZAT14   --------           <---------CCA1(2)                                            <<<<<<<<<TBF1 ===============         --------->ANAC58                                            <<<<<<<<<TBF1    <--------------         --------->ANAC55(1)                ------>ZmHOX2a(1)     <<<<<<<<<TBF1 --------->TGA1a   ---         --------->ANAC55(2)               --------->TOE2(3) =============================bZIP_DOF<--         <---------ANAC55(2)      <---------ARR14(2)         <----------DOF2    --------->O2 --------         --------->ANAC58         --------->ARR14(2)        <---------ANAC58    =====================         --------->ANAC46--------------------->WRI1         <---------ANAC58    <---------O2 --------   cacagagaaacacgtatctctctctctctgtgagtgtatcgtcttccttatttgttccagtggctttcttcttcttcttcactcgtggctattacaagta  7378100                                                --------->YAB1      --------->ANAC58                       --------->YAB1      --------->ANAC46                      <---------AHL20(2)      --------->ANAC58                      --------->AHL20(2) >AGL15------>NtERF2                     <---------AHL20(2) -------At4g35610              <----------DOF2 <---------YAB1 ->ANAC46             <---------ANAC58   --------->AHL20(2) ===========================================================================================MADS_MADS -AGL15--------->LBD16<---------ANAC58  --------->AHL20(2) ------>HSFC1(2)      --------->TOE2(3)<---------YAB1                                       <-------- -------HSFC1(2)  <----------DOF2   --------->ICU4                                 ----------->GT1 ->ANAC58        <---------ANAC58   *TSS<---------AHL20(2)                     <---------YAB1 ------- ============================bZIP_DOF<---------ICU4                         --------------->AGL15 ->ANAC58        <---------ANAC58   <---------YAB1 --------->YAB1           =========================   agcttcttccgccattgatgctttccttgatgcctttgattattaatttataatcaaaaattcttctctcaaatatttgttaatatagtaaatactttga  7378200                                                ----------->HVH21                       <-----------HVH21                               <---------ANAC58<-------MYC3                             <-----------TGA1                               <---------ANAC58------->MYC3                        <---------HSFC1(2)                              ----------------->AGL1                           ----------->GT1      --------->DOF5.7(2)   <-----------GT1   <---------At4g35610            <---------TOE2(3)    <---------ANAC46 <---------DAG2           --------->At4g35610       --------------->AGL15   ---------->ID1  ---------->ID1    <---------YAB1  --------->ATHB12   <---------------AGL15 --DOF2--------->WRKY12  <---------YAB1      <-------TEIL  --------->TOE2(3) <---------TOE1(3) ---->HVH21       <-----------GT1<---------MYB52(1)<---------WOX13(1)  ----------------->AGL1 =======================================================================================MADS_MADS   cgcttgtcgtttaccatatttgaccttatgtttccgtttttgataggcacatgactgattaccacaatacgttgcatttaagggtaacttcgtcatttca  7378300                    <---------AHL20(2)                    --------->AHL20(2)                <---------AHL20(2)                --------->AHL20(2)               --------->AHL20(2)             ------->TEIL                                                     --------->AHL20(2)          --------->AtLEC2        --------->TOE2(3)                           --------->AHL20(1)      <-----------HVH21         <---------TOE1(3)                             <---------AHL20(2)      <-----------TGA1          <---------TOE2(3)                             <---------AHL20(1)     <---------bZIP60(1)       --------->MYB52(1)                            --------->AHL20(2)     --------->bZIP60(1)    --------->TOE2(3)    --------->MYB52(1) <---------YAB1   --------->MYB52(1)       --------->TOE1(3)  <---------MYB52(2)<---------AHL20(2)   ttccataacgtcatgcatttaattttttaaacttaacgtttaaaactaaactaacatcgtttaatagtttattatacgaataaattcgatatgaaaatgt  7378400                  <----------DOF2                <---------RVE1(1)                <------ZmHOX2a(2)               --------->ARR11(3)               --------->AGP1               <---------ARR14(3)               <---------ARR11(3)               --------->ARR14(2)               <---------ARR14(2)                                                                ----               <---------AGP1---------->DOF2                                                    <----               --------->ARR14(3)                                                   --------->ARR11(3)               <-----------ARR10                                                    <---------ARR11(3)              <---------ARR14(1)                                                    <---------GLK1(2)              <---------CCA1(2)                       ---------->DOF2              <---------RVE1(1) --------->ANAC46------>ZmHOX2a(2) <----------DOF2---------->DOF2        ------->TEIL<---------RVE1(1)   tacccaaaacaatagcagatcttttgtctgagaaaggcttttattatctcccaaaagaaagcagtagaaaatatgtatatgtaagagatttttaagttat  7378500                                                                        --------->ATHB12                                                                   <---------ALFIN1                                                              --------->ANAC58                                                              --------->ANAC58                                       --------->AHL20(2)    <-------TEIL <---------GLK1(1)                                     <----------DOF2        --------->CCA1(2)                --------                                     --------------->AGL15  --------->ARR14(1)            <---------AHL20(1)                                     <---------------AGL15 --------->ARR11(1)             --------->AHL20(1)                                    ----------------->AGL2 <---------ARR14(2)      --------->TOE2(3)        ----------->GT1             ----------------->AGL3 --------->ARR14(2)     --------->YAB1   --------->ATHB12          <---------TOE1(3)           ----------->ARR10--------->GLK1(1)  <------- ----->YAB1                  <---------TOE2(3)    --------->YAB1 ----------->RAV1(1)     --------->AHL20(2) -----YAB1           <----------DOF2<-----------------AGL3 <---------GLK1(2)     <---------ATHB12   gaaaacgattgagttatatgtctctttctctaaggtgttctttatatagtaatgagaataagattcgcaacacatgatttccaaacatcaaatatataaa  7378600  Previous    Next  AGI:  At1g21070.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G76670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66327.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 7375858    to: 7378136    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21080.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76700.1); similar to DnaJ-like protein [Brassica juncea] (GB:AAW50121.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 7378578    to: 7382451    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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