Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------At4g35610                 ----------->RAV1(2)                                   --------->YAB1                 --------->At4g35610                              <---------YAB1                   <-                --------->GLK1(2)                ------->TEIL <---------ARR11(3)                   <-             --------->ANAC58         <---------ANAC58        --------->ARR11(3)              -------             --------->ANAC58         <---------ANAC58        --------->ARR14(2)              <------        <----------ID1          --------->ARR11(3)           <------ZmHOX2a(1)                <------      --------->ANAC58          <---------ARR11(3)       <---------ZAT14                      <------      --------->ANAC58         <---------GLK1(1)<-----------GT1<------ZmHOX2a(2)      --------->YAB1      --------->ANAC46------->TEIL    <---------ANAC46   --------->ZAT14           <----------DOF2 <-   tcgtccaaacgcgacaagcatctgaacctttggagttcttccttgtttatgaaccctactgcaggatcatcaataacaacaattcctttcacaatctcgt  7260400                                    ----------->GT1--------->At4g35610                              <-------TEIL         <---------At4g35610   --------->LBD16          <---------GLK1(2)    <---------ZAT14  <---------LBD16   --------->LBD16<---------HSFB2a(2)   <------ZmHOX2a(1)            --------->GLK1(1) <---------LBD16    <---------MYB46(3)        <---------ANAC46                        <---------GLK1(1) --------ANAC58    <---------ANAC46--------->HSFB2a(2) <---------TOE2(3)             <---------ARR11(3) --------ANAC58   <---------LBD16 <---------LBD16--------->ZAT18                     --------->ARR11(3) -->O2   <---------ARR11(3) <---------ARR14(2)<---------ANAC55(2)                    <---------ARR14(2) ---ANAC58  <----------DOF2 --------->ARR14(2)<---------ANAC58                       --------->ARR14(2) ---ANAC58 <---------DAG2 ----------->ARR10  <-----------------------TaNAC69(2)   <--------P ---O2   --------->ARR11(3) --------->ARR11(1)<---------ANAC58                 <---------ATHB12    <- --------ANAC46  <-----------RAV1(1)<------NtERF2--------->ZAT14          >>>>>>>>>>>>>>>>>LFY    ---   ggctcggggaataccttttctgcgggtgaagattcgtcgggaaaaaatgcgtgaactgaggaaactttccacttggttccaatggtagatatcccttgag  7260500                                                    <-------TEIL                                                --------------->AtSPL8         --------->YAB1                     --------->ARR14(2)             <---------ANAC46        <-         <---------ICU4                   <----------DOF2                 --------->ZAT2           --        <---------ATHB12                 <---------ANAC46                 --------->At4g35610     ---    <---------AHL20(2)                   <---------ANAC58                 <---------At4g35610     <--    --------->AHL20(2)                   <---------ANAC58                 <---------ZAT2          --- ------TEIL                <------ZmHOX2a(1)<---------ARR14(2)     <---------ARR11(3)             <-- ------>CCA1(2)<---------HSFB2a(2)      ---------->ID1    <---------------AtSPL8              <------ZmHOX2a(1)   atacatataaatcatgtctggatgaagaaggaggctggacttggcgtttctgagtacattatagtacaagttctgtagctgggaaacagttagagaggaa  7260600            ---------->DOF2       <-------TEIL -----ZmHOX2a(2) ------->CCA1(2)                                          <---------ARR11(3) ------>ARR14(2)                                        ------->TEIL -------ARR11(3)         <------NtERF2        <---------HSFB2a(2)     --------->YAB1 ------>ARR11(3)       --------->ALFIN1       --------->HSFB2a(2)    <---------YAB1           ------- -------ARR14(2)    --------->DAG2      --------->GLK1(2) --------->ARR11(3)         <------ZmHOX2a(1)   gatccaatgtgcatcaaagtgtaaggtggcaaacctctagctaatctttgagaagatgaacatcttgggttatcagaatagacatcaggacccaagtagt  7260700                                                                           <---------ATHB12                                                                         --------->WOX13(1)                                                                       <---------YAB1                                                             <---------ARR11(1)                                                             --------->ARR14(2)                                                             --------->ARR11(3)    <---------ICU4                                           <---------ARR14(2)   <---------YAB1                               <----------DOF2        ------------>CBF       -------   --------->ICU4 --------->ANAC58        --------->ANAC46   <---------ARR11(3)         <---------ANAC55(2) -->MYB111(1)     --------->ANAC58     --------->GLK1(2)    <---------CCA1(2) ------->TEIL  <--------   tgctcatgatgaaattaaccaagaaatactgatcactcgataatccgtcgctatacagactcatatcttcgatatcaatgaacctgcattacatatgaaa  7260800                                --------->KAN4(2)                               --------->HSFB2a(1)                               <---------HSFB2a(1)             <---------ANAC55(2)                             <------ZmHOX2a(1)                 <---------ANAC55(1)                          <---------ICU4                     <---------AHL20(2)                    --------->ANAC58                      <---------ICU4      ----------------->AGL1     <------------CBF     --------->YAB1                 --------->ICU4       ----------------->AG  ----------->RAV1(1)------------>CBF                <------ZmHOX2a(1)        ------------>CBF   ---- --->DOF2           --------->ANAC58                --------->ANAC46     --------->ARR14(2)   <------ -YAB1  <-----------HVH21--------->ICU4         <-----------GT1--------->ANAC55(2)      --------->YAB1   gtggcaacattgtcacaaatggaagcaataaggacattccaaaaacatagttacaggacataattaagtgtctcaaatttgccaatttagtcatagcatt  7260900                                     <-----------GT1         <--------HAHB4   ------>ZmHOX2a(2)         <---------ICU4  <<<<<<<<<GATA-3        <---------ATHB12 <<<<<<<<<GATA-2 --------->ARR11(3)      <<<<<<<<<GATA-4 <---------ARR14(2)      <<<<<<<<<GATA-1                                              <---------YAB1 --------->ARR14(2)      <---------GLK1(1)                                          <--------HAHB4 <-----------ARR10      <---------ARR11(3)                                          <---------ICU4 --------->GLK1(2)      --------->ARR11(3)                                          --------->YAB1 <---------ARR11(3)     <---------AGP1             <---------ICU4                  <---------YAB1 ----->YAB1            <---------CCA1(2)         ------------>CBF              <---------DAG2 <------ZmHOX2a(1) ------CBF <---------YAB1<------ZmHOX2a(2)<----------DOF2<----------DOF2    <-----------GT1 <--------   gaaaatctccatcattttagtccctagatctcttaagtttaacccttttctaacaatgactttagtctccataatgttttgccttatcattactaaggag  7261000                 --------->TOE2(3)                 --------->TOE1(3)           <---------ARR11(3)              <-----------GT1                --------->ARR11(3)                                 -----  --------->ARR11(3)                         --------->GLK1(2)                            <----------  <---------ARR11(3)                   ------->GAMYB                   <---------------AGL15--------- -TOE2(3)   --------->AHL20(2)      <-----------GT1      ---------->DOF2               ----------->GT1   aaaacatcttcaaattaaaccctaaaaacttcacttattaacagcaaaatctacatttgaaaagactatgttgatattttgagaaagattagtaactctg  7261100                                                                                          ---------->DOF2                                                                                      <---------At4g35610                                                        --------->RVE1(1)             --------->At4g35610                                                  --------->LBD16                    --------->MYB59 ---->At4g35610                                 --------------------->WRI1        --------->STY1(2) -GT1                                        <-----------GT1                 --------->ZAT6 >ZAT6<-----------GT1                     <---------ICU4--------->CCA1(1)    <-----------GT1     ----   cttcatatatactcttcacaatacaaaaaaaaaaaaaaaaccaatttttacccagaaaatatcgcaatccaacaatttttcactagttagctcaaagtca  7261200                                                        <---------At5g28300                                                       <-----------GT1                 ----------->RAV1(1)                                                   <---------DAG2                      <---------ALFIN1                 <---------TOE2(3)                 <----------DOF2                    --------->MYB46(3)       ------>ZmHOX2a(1)                           --------------->AGL15              --------->ANAC46      --------->TOE2(3)                         <-----------GT1             --------------------->WRI1      --------->TOE1(3)                         ---------->ID1        --------->PCF2--------->ANAC46   <-----------GT1----------->GT1            --------------->AtSPL8   <------ZmHOX2a(2)--------->AtMYB61 -------->CBF  ---------->DOF2         ------->TEIL<---------------AGL15    <------------CBF  -------   acaattttccttaaatctaaaggttactacgcttgaatacgaaccagtttgtactttttacagcaaaaatcgatcccacattgttcccaccacagaagat  7261300  Previous    Next  AGI:  At1g20870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66281.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978) Range:  from: 7259091    to: 7260764    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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