Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->At4g35610                 ----------->RAV1(2)                                   --------->YAB1                 <---------At4g35610                              <---------YAB1                   <-                --------->GLK1(2)                ------->TEIL --------->ARR11(3)                   <-             --------->ANAC58         <---------ANAC46        --------->ARR14(2)              <------             --------->ANAC58         <---------ANAC58        <---------ARR11(3)              <------        <----------ID1          --------->ARR11(3)           <------ZmHOX2a(1)                <------      --------->ANAC58          <---------ARR11(3)       --------->ZAT14              --------->YAB1      --------->ANAC46         <---------GLK1(1)<-----------GT1<------ZmHOX2a(2)   <----------DOF2 <-      --------->ANAC58------->TEIL    <---------ANAC58   <---------ZAT14     --------->YAB5   -------   tcgtccaaacgcgacaagcatctgaacctttggagttcttccttgtttatgaaccctactgcaggatcatcaataacaacaattcctttcacaatctcgt  7260400                            --------->GATA12                            --------->ARR14(2)     <---------At4g35610            <---------DOF5.7(1)     ----------->GT1--------->At4g35610                <---------GLK1(1)            <----------DOF2 <---------ARR14(2)   --------->ZAT18                      --------->KAN1         <---------ARR11(3) <---------GLK1(2) <---------ANAC46                        --------->GLK1(1)   --------->LBD16          <---------ARR11(2)<---------ANAC55(2)                    --------->ARR14(2)  <---------LBD16   --------->LBD16--------->HSFB2a(2)                               <---------ARR14(2) <---------LBD16    <---------MYB46(3)        <---------ANAC58                       <---------RVE1(2) --------ANAC46    <---------ANAC46<---------HSFB2a(2) <---------TOE2(3)             --------->ARR11(3) --------ANAC58   <---------LBD16 <---------LBD16--------->ZAT14                     <---------ARR11(3) ---ANAC58 <---------DAG2   --------->ARR11(1)<---------ANAC58                    <--------P ---ANAC58 <---------DOF5.7(1)<-------TEIL--------->KAN1 <------ZmHOX2a(1)>>>>>>>>>>>>>>>>>LFY ---O2   --------->ARR11(3)--------->KAN1--------->DOF5.7(1)             --------->ARR11(2) --------ANAC58  <-----------RAV1(1)<------NtERF2<---------ZAT14         <---------ARR11(2)        <- -->O2  <---------KAN1    ----------->ARR10  <-----------------------TaNAC69(2)<---------ATHB12   ---   ggctcggggaataccttttctgcgggtgaagattcgtcgggaaaaaatgcgtgaactgaggaaactttccacttggttccaatggtagatatcccttgag  7260500                                                                                                   --         --------->YAB1                             <-------TEIL                                   <-         <---------ICU4                     <---------ARR14(2)                                    ---        <---------ATHB12                    <---------ARR11(2)                                    ---    <---------AHL25(1)                      --------->ARR14(2)                                    <--    --------->AHL25(1)                    <----------DOF2                  <---------ANAC46       <--    --------->AHL20(3)                   <---------ANAC46                 --------->ZAT2          ---    <---------AHL20(2)                   <---------ANAC58                 <---------At4g35610     ---    --------->AHL20(2)                   <---------ANAC58                 <---------ZAT2          ---    --------->AHL12(3)     <------ZmHOX2a(1)--------->ARR11(2)     <---------ARR11(3)             <-- ------TEIL               --------->DOF5.7(1)   --------------->AtSPL8    --------->At4g35610     <-- ------>CCA1(2)<---------HSFB2a(2)      ---------->ID1    <---------------AtSPL8              <------ZmHOX2a(1)   atacatataaatcatgtctggatgaagaaggaggctggacttggcgtttctgagtacattatagtacaagttctgtagctgggaaacagttagagaggaa  7260600            ---------->DOF2       <-------TEIL ------->CCA1(2) -----ZmHOX2a(2) ------>RVE1(2) ------>ARR11(3) -------ARR11(3) -------ARR14(2) ------>ARR14(2)                                          --------->ARR11(3) ------>ARR11(2)         <------NtERF2        <---------HSFB2a(2) ------>GATA12         --------->ALFIN1       --------->HSFB2a(2)     --------->YAB1 -------GATA12      --------->DOF5.7(1)  <---------YAB5 ------->TEIL <---------YAB1           ------- -------ARR11(2)    --------->DAG2      --------->GLK1(2) <---------ARR11(3)         <------ZmHOX2a(1)   gatccaatgtgcatcaaagtgtaaggtggcaaacctctagctaatctttgagaagatgaacatcttgggttatcagaatagacatcaggacccaagtagt  7260700                                                                           <---------ATHB12                                                                          --------->WOX13(2)                                                                         --------->WOX13(1)                                                                       ------------>CBF                                                                       <---------YAB1                                                              --------->KAN1                                                             <---------ARR11(3)          <---------WOX13(2)                                 --------->RVE1(2)          --------->WOX13(2)                                 <---------ARR14(2)    --------->YAB5                                           --------->ARR14(2)    <---------ICU4                        --------->ANAC46   --------->ARR11(3)   --------->ICU4             --------->KAN1    <----------DOF2       --------->RVE1(2)       -------   <---------YAB1 --------->ANAC58     --------->GLK1(2)     <---------ARR11(1)         <---------ANAC55(2) -->MYB111(1)     --------->ANAC58    --------->KAN1        <---------CCA1(2) ------->TEIL  <--------   tgctcatgatgaaattaaccaagaaatactgatcactcgataatccgtcgctatacagactcatatcttcgatatcaatgaacctgcattacatatgaaa  7260800                                --------->KAN4(2)                               --------->HSFB2a(1)             --------->ANAC55(2)                               <---------HSFB2a(1)             <---------ANAC55(1)      --------->YAB1                               --------->KAN1                <---------AHL20(2)  <---------WOX13(2)                             <------ZmHOX2a(1)             --------->WOX13(2)    --------->WOX13(2)                          <---------ICU4                   <---------WOX13(2) ----------------->AG                    --------->ANAC58                      <---------ICU4      ------------>CBF     <------------CBF     --------->YAB1                 --------->ICU4       ----------------->AGL1  ----------->RAV1(1)------------>CBF                <------ZmHOX2a(1)   --------->ARR14(2)      ---- --->DOF2           --------->ANAC58                --------->ANAC46     --------->GATA12     <------ -YAB1  <-----------HVH21--------->ICU4         <-----------GT1<---------ANAC55(2)     <---------YAB5   gtggcaacattgtcacaaatggaagcaataaggacattccaaaaacatagttacaggacataattaagtgtctcaaatttgccaatttagtcatagcatt  7260900                                     <-----------GT1         <--------HAHB4   ------>ZmHOX2a(2)         <---------ICU4  <---------GLK1(1)        <---------ATHB12 <<<<<<<<<GATA-2 <---------ARR14(2)      <<<<<<<<<GATA-3 --------->ARR14(2)      <<<<<<<<<GATA-1 --------->RVE1(2)       <------ZmHOX2a(2)                                            <---------YAB1 <---------ARR11(3)     --------->GATA12                                            <---------ICU4 --------->ARR11(3)     <---------GATA12                                            --------->YAB1 <-----------ARR10      <---------ARR11(3)                                          <--------HAHB4 --------->GLK1(2)      --------->RVE1(2)          <---------ICU4                   --------->YAB5 --------->GATA12       --------->ARR11(3)       ------------>CBF                  <---------YAB1 <---------GATA12       <---------AGP1    <----------DOF2<----------DOF2           <---------YAB5 ----->YAB1            <---------CCA1(2)  <---------DOF5.7(1)                  <---------DAG2 <------ZmHOX2a(1) ------CBF <---------YAB1<<<<<<<<<GATA-4 <---------DOF5.7(1)                <-----------GT1 <--------   gaaaatctccatcattttagtccctagatctcttaagtttaacccttttctaacaatgactttagtctccataatgttttgccttatcattactaaggag  7261000                 --------->TOE2(3)                 --------->TOE1(3)              <-----------GT1                --------->GATA12            --------->AHL20(2)               <---------GATA12            <---------AHL25(1)               --------->RVE1(2)            --------->AHL25(1)               --------->GLK1(2)            <---------AHL25(3)               --------->ARR11(3)                                 -----          --------->WOX13(2)                 <---------ARR11(3)        <---------------AGL15---------  --------->ARR11(3)                   ------->GAMYB                  <---------RVE1(2)   <----------  <---------ARR11(3)                <-----------GT1        --------->DOF5.7(1)         ----------->GT1 -TOE2(3) <---------WOX13(2)     --------->WOX13(2)      ---------->DOF2           --------->YAB5   aaaacatcttcaaattaaaccctaaaaacttcacttattaacagcaaaatctacatttgaaaagactatgttgatattttgagaaagattagtaactctg  7261100                                                                                          ---------->DOF2                                                                                      --------->At4g35610                                                         --------->RVE1(2)            <---------At4g35610                                                        --------->RVE1(1)            --------->MYB59                                                --------------------->WRI1        --------->STY1(2) ---->At4g35610                              <-----------GT1                 <-----------GT1 >ZAT6--------->KAN1                      <---------ICU4--------->CCA1(1)    --------->ZAT6         < -GT1 <-----------GT1           <---------AHL12(2)--------->LBD16        <---------AHL12(1)      ----   cttcatatatactcttcacaatacaaaaaaaaaaaaaaaaccaatttttacccagaaaatatcgcaatccaacaatttttcactagttagctcaaagtca  7261200                 <---------TOE2(3)           --------->GATA12                             <---------At5g28300           --------->RVE1(2)                           <-----------GT1                 <---------ALFIN1           <---------GATA12                        <---------DAG2                      --------->AtMYB61       ------>ZmHOX2a(1)                           <---------------AGL15    --------------------->WRI1      --------->TOE1(3)                            --------------->AGL15    <------------CBF  -------      --------->TOE2(3)                         ---------->ID1        --------->PCF2--------->ANAC46   <-----------GT1                              <-----------GT1       <------ZmHOX2a(2)----------->RAV1(1) ---------AHL12(2)----------->GT1            --------------->AtSPL8  <---------GATA12 --------->ANAC46 -------->CBF  ---------->DOF2         ------->TEIL<----------DOF2   --------->GATA12 --------->MYB46(3)   acaattttccttaaatctaaaggttactacgcttgaatacgaaccagtttgtactttttacagcaaaaatcgatcccacattgttcccaccacagaagat  7261300  Previous    Next  AGI:  At1g20870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66281.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978) Range:  from: 7259091    to: 7260764    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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