Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------>ZmHOX2a(1)                            <---------ATERF1(1)                           ----------->HVH21                       <---------ANAC46                      <---------LBD16                 --------->ANAC58                   --------->At4g35610                --------->ANAC58                      --------- --------DOF2   --------->At4g35610  ----------->RAV1(1)                         --------->ANAC58 --At4g35610    <---------At4g35610 <---------ALFIN1<---------DOF5.7(2)          --------->ANAC58   cttttgagttaaacatagagctgcttcgggtgactcctccaccagaagagaagtgaacgctaataagagaagtttgaagcttcaagcattgtcccaacat  7233400                                                                               ------>MYB46(1)                                                                             <---------MYB46(2)                                                                             --------->AtMYB61                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                          --------->ANAC46                                                                    <-------GAMYB                                                                   --------->MYB52(2)                                                                   <------MYB83------>MYB83                                                                   ----------->GT1        <----------ID1                                             <---------MYB46(3)              --      <---------ICU4                                               <------MYB46(1)        <---------ZAT6     --------->ICU4              ----------->GT1                 <--------P --------->ANAC58 --------   ---------->DOF2  ---------->DOF2                             <---------MYB52(1)        ----------- -->RAV1(1) ---------->DOF2 ---------->DOF2                  <---------ANAC46<---------MYB111(2)  ---   ttgtgtaaagatgacaaaggagaaaagagagaaagatgtaaattttggagtttttagtttgtgtctggttggttatacaccaaactctggtacagttaaa  7233500                                                      --------->HSFC1(2)                                                      --------->HSFB2a(1)                                                      <---------HSFC1(2)                                                      <---------At4g35610                                                      --------->At4g35610                                                      <---------ZAT2                                                      <------NtERF2                                                      <---------HSFB2a(1)                                               <---------bZIP60(2)                                               <---------O2                                               --------->TGA1a                                               <---------TGA1a                                               --------->O2                                               <---------ANAC55(1)                                               <---------ANAC55(2)                                               <---------ANAC46                                               <---------ANAC58                      ------>MYB83          <-----------RAV1(1)                  --------->ANAC55(2)                   ------>MYB46(1)   <---------MYB52(1)                     <---------ICU4                   --------->TOE2(3)  ----------->GT1                     <---------AHL20(2)                 --------->ARR11(3) ------->MYB52(1)                     --------->AHL20(2)                 <---------ARR11(3) ->AHL20(2)                   ===========================bZIP_DOF        --------->AHL20(1) >GT1     <---------MYB46(3)  ---------->DOF2  <---------ANAC58          <---------AHL20(1)  -------- ------>MYB52(1)         ----------->GT1 --------->ICU4              --------->REM1(1)      <--------   taaccggtatatttgttggactaaaatttgttaaaagtatataattcttacgtggcagcttctagttggctacaatatcttaaaaccaaatcaaatcaaa  7233600                                   --------->MYB52(1)                                   ------>MYB46(1)                                   ------>MYB83               <------MYB46(1)      --------->ATHB12           --------->AtMYB61--------->TOE2(3)                                 -     --------->ICU4              <---------MYB59  --------->YAB1                                    < ->YAB1                 ----------->GT1    <-----------HVH21  <------MYB83      --------->YAB1 <----- -ATHB12        --------->YAB1 >>>>>>>>>MYB2      --------->TOE1(3)        --------->MYB46(3)  ------   acttgaaatgatttgaaatcatagaaccgagaaaaccaaaccgaatgtcaaaccataacaaatttggttttagttcaaccgataataaaccaaaatgtct  7233700                             ------>NtERF2                           <---------ANAC58                           <---------ANAC58                           <---------ANAC46                          --------->At4g35610                          <---------ZAT2                          --------->ZAT2                          <---------At4g35610                         --------->MYB111(2)                         <---------MYB46(3)                             <----------DOF2       -------->P      <---------ANAC58                            <---------At4g35610       ------>MYB83    <---------ANAC58                            --------->HSFC1(2)       ------>MYB46(1)<------MYB46(1)                    --------->ARR11(3)     <---------MYB46(2)<-------GAMYB                     <---------ARR11(3)          --------->GLK1(2)     <---------MYB59  <------MYB83             <---------AtMYB61   <---------HSFC1(2)--------->ARR11(3)     <---------MYB111(1)<--------P           <----------DOF2     <--------P    --------->LBD16   -------->P     --------->GLK1(2)        <---------At4g35610  <---------MYB52(1)   <---------ARR11(3) -------->At4g35610   <---------MYB46(3)   --------->At4g35610 --------->LBD16--------->LBD16-------- ---------At4g35610  --------->MYB59     <---------ZAT18 *TSS<---------LBD16 --------->HSFB2a(2) ----ETT(2)       <---------ARR14(2)<---------ANAC58    --------->GLK1(1)    <---------HSFB2a(2) --->ETT(2)       --------->ARR14(2)<---------ANAC58    <---------GLK1(1)   <---------LBD16<---------ZAT6   acagctacctactaggtgagaatttggttgctggctctgcttgtgagctttggtagcgatatctccggtagcttcttttcccgagaaaatctagtgagaa  7233800                                                                        --------->GLK1(1)                                                                      --------->ZAT14                                                                      <---------ZAT14                                --------->LBD16                       <---------ZAT18                 --------->GLK1(1)                                 --------->LBD16                 --------->CCA1(2)                             <---------ARR14(2)          ----------                <---------ARR11(3)                           <---------HSFB2a(1)           <---------At4g35610                --------->ARR11(3)                           --------->HSFC1(2)            --------->At4g35610                --------->ARR14(2)                           --------->HSFB2a(1)         <-----------RAV1(2)                <---------ARR14(2)               --------->AtLEC2<---------LBD16        <---------ZAT2 --->GT1<---------ZAT14   <---------ICU4      <-------TEIL   <---------HSFC1(2)      ----------->RAV1(2)   aaatggagacttctctgagatatgctactaattccaggtctctgaaaattcatgccaaggagaagtttccggtgaactccaaaactcgcctgcaggtgaa  7233900                    <---------YAB1                    <---------AtMYB61                 <---------MYB52(1)                <-------GAMYB               <---------MYB46(3)               <----------DOF2                            <---------ARR11(3)                  <------        -------->ATHB1                                    --------->ARR11(3)                  -------        --------->ATHB51                                  <---------AHL20(1)              <---------AHL20(2)        <---------ICU4                             <---------WOX13(1)                 --------->AHL20(2)        --------->ATHB12                          <---------ANAC58                 <------ZmHOX2a(1)       --------->ICU4                             <---------ANAC58            --------->TOE2(3)       <---------AHL20(2)                        --------->ATHB12       <-----------GT1  --------->AHL20(2)       --------->AHL20(2)                       <---------YAB1  <----------DOF2------>ZmHOX2a(1) ->GT1 <---------ATHB51          --------->ZAT6 <---------AHL20(2) <---------YAB1 <---------YAB1  ---   tttcttcaaattattggctgttatggtggattttagcactattcttcaatttgattgcgatatattcttttgattttcttccttaggattatttaatgca  7234000                                                         <------ZmHOX2a(1)                                                       <---------TOE2(3)                                                      --------->YAB1                                                     --------->ICU4                                                  <---------YAB1          --------->ZAT14 ---ZAT18              --------->MYB52(1)       ----------->GT1           <---------ZAT14 -->ZAT18--------->ANAC55(2)    <---------LBD16 --------->YAB1    <-----------GT1 <----------DOF2  <- ------->DOF2  <---------AHL20(2)        <---------TOE2(3) ----------->GT1--------->ZAT18  <---------   caaagcctcttacttatttataggctaatggttttcagggtttatggaaattgtaattaggatgttattttctatgtacacaggctttagagtcttttag  7234100                 --------->REM1(2)                 --------->ZAT14                           <---------MYB59                --------->ALFIN1                          --------->ANAC55(2)            --------->At4g35610               --------->HSFB2a(2)   --------->At4g35610                        <---------HSFB2a(2)               --------->ANAC46   --   <---------At4g35610                    <---------DAG2<-----------GT1       <---------ALFIN1     -- ---------DOF2<---------ANAC46   --------->GLK1(2)      <---------YAB1       --------->ZAT14  ------- -DOF2 ---------->DOF2   ---------->DOF2  <----------DOF2 --------->ANAC46   <---------ZAT14---------   tctttagcagaaagagctgtgtaggcttaaagaagaatcgatagctttttggaagattatacttaacttgttttttggctacactctatccccttgtcga  7234200                                        <------MYB83                                     <---------ANAC58                                        <---------MYB46(3)                               <---------ANAC58         --------->ANAC58               <------MYB46(1)                             <---------At4g35610       <-----------RAV1(2)          <---------MYB46(3)                              --------->ZAT2      --------->ZAT2                <-----------RAV1(1)                             <---------ZAT2      <---------ZAT2      <-----------GT1                                           --------->At4g35610 ------->ICU4 <---------HSFB2a(1)<----------DOF2              <-------TEIL        <------ZmHOX2a(1) ------->GLK1(2)         <XXXXXXXXXXXXXXXXXXXMIR156A-F     --------->At4g35610 <-----------RAV1(2) -->ETT(2)    --------->ICU4 <----------DOF2 <-----------GT1 <----------DOF2  <-------TEIL      ----- >REM1(2)--------->ANAC58<XXXXXXXXXXXXXXXXXXXMIR156G <---------YAB1          --------->CCA1(2)  -----   gattatggagcagggaatgtttgtgttcttactttcttttgttggttttacatttgtgattagcttcatggagagctagatacaggagctggagtgccaa  7234300  Previous    Next  AGI:  At1g20810.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. Identical to Probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9LM71); similar to immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative [Arabidopsis thaliana] (TAIR:AT3G10060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66268.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 7231995    to: 7233555    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g20816.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76405.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66270.1) Range:  from: 7233757    to: 7235117    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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