Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->LBD16         <------MYB46(1)                                                             --------->RAP2.6(2)         <------MYB83                                         <---------ANAC58       --------->ANAC58        <---------AtMYB61      ------->TEIL                   <---------ANAC46       --------->ANAC58        --------->MYB59       <---------CCA1(2)               <---------ANAC58       ------->GAMYB  ------->MYC3  <---------ARR14(2)     --------->AtLEC2    ----------->HVH21        --------->MYB46(3)  <-------MYC3  --------->ARR14(2)<----------DOF2<----------DOF2                   -------->P   tacacatggtttggtctggattcgaagacgttgtatctttcatgcagacaactttgaatccctgacttgttctatcaatttgatcaaccgcaaaaccaat  7229800                                                                   --------->ATHB12                                                  --------->ZAT6 <---------WOX13(1)                        ---------->DOF2         <-----------GT1--------->ATHB12                    <------MYB83<---------At4g35610 --------->ANAC58                    <------MYB46(1)      <---------DAG2     ---------->DOF2                   <---------TOE1(2)     <----------DOF2  --------->ANAC58        <---------TOE2(3)       <---------AHL20(2)       --------->At4g35610 --------->ANAC58              --------->ANAC58  <-------TEIL     <---------TOE2(2)    <---------DAG2    --------->ANAC58        --------->ANAC58   gcgattcattttatgacttcgtaggttaaagcttagctctcccctttttttaacacgaccaagaaagattgatttagagtgatcaaggaatcgatacctc  7229900             ----------->HVH21                                                                   ----             --------->ANAC46                                                                    ----            <---------HSFB2a(2)                                                                  <---        <---------ARR14(2)                                                                      <----        --------->ARR14(2)     --------->AtLEC2                                        <------ZmHOX2a(1)        <---------GLK1(2)    --------------->AGL15                                   <---------TOE2(3)    <---------At4g35610   --------->GLK1(2)                                     --------->ARR11(3)    --------->At4g35610--------->ARR11(3)                  --------->At4g35610  <---------ARR11(3)   ttagtgagcggattcgcgacgcagagataatccatgaagagtaagagaaggccagagcaagagcagagaaacctagtcttgatatctaaggaatatgtgt  7230000                                               ------>ZmHOX2a(2)                                               ================HOX2a_HOX2a                                               <-------TEIL                               --------->ANAC55(1)                                              =================HOX2a_HOX2a                <---------ANAC55(2)                                              <------ZmHOX2a(2)                           --------->ANAC55(2)                                             <---------ARR14(2)            <---------ARR14(2)  <---------AtLEC2                           --------->ARR14(2)            --------->ARR14(2) --->TEIL   <---------GLK1(2)  <---------At4g35610                   --------->MYB52(1)   --------->ANAC58 ----->ARR14(2)              <---------HSFB2a(2)              <---------ANAC46            --------->ANAC58 ------ARR14(2)              --------->HSFB2a(2)        <------ZmHOX2a(1)  --------->GLK1(2) -------- -----CCA1(2)       ---------->DOF2     --------->CCA1(2)   <---------ANAC46  <---------ETT(1)   atctgaatggcatagaatcgccgaaagggttgcagaagagagatttggatccatagtaggagttgtgtagcaaaccgaatccgaccagagacaagtaatt  7230100                     --------->CCA1(2)              ------>ZmHOX2a(2)             --------->GLK1(1)                                                             --------->ARR11(3)             <------ZmHOX2a(2)               <---------ANAC46                              <---------ARR11(3)            --------->ARR14(2)               <---------ANAC58                        --------->YAB1            <---------ARR14(2)               <---------ANAC58                       <---------YAB1            <-----------ARR10          <------ZmHOX2a(2)                           --------->AHL20(2)            <---------ARR11(3)        --------->ARR14(2)                           <---------AHL20(2)            ------->TEIL              <---------ARR11(3)                          --------->YAB1            --------->ARR11(3)        <---------AGP1                         ------>ZmHOX2a(2)           <---------CCA1(2)          --------->AGP1                <---------ARR14(2)  <---------AHL20(2)         --------->ANAC55(2)          <---------ARR14(2)            --------->ARR14(2)  --------->AHL20(2)         <---------ANAC55(2)          --------->ARR11(3) <---------ICU4     <------ZmHOX2a(2)    ----        <---------LBD16--------->CCA1(2)------>ZmHOX2a(2)--------->YAB1    <---------ARR14(2)    <--- ->ATHB12--------->ANAC55(1)       <---------WOX13(1)   <---------YAB1     --------->ARR14(2) <------   ggatttgaaatacggatcttcagatatatgcgagttgatagatcttctcgtgcatttcatcatagctagggatttgggatccaattttaataaaatcttt  7230200                                                                           --------->ARR14(2)                                                                       <---------TOE2(3)                                                                      <---------At5g28300                             ------>ZmHOX2a(2)                       <-----------GT1                -      --------->AtLEC2       =====================================HOX2a_HOX2a                     --- ----->HSFB2a(2)  --------->ARR11(3)             ---------->DOF2 --------->ARR11(3)               <-- ------HSFB2a(2)  <---------ARR11(3)        ---------->DOF2      <---------ARR11(3)            <----- ----DOF2     <--------P     *TSS     ----------->GT1      <------ZmHOX2a(1)            <----------DOF2   tcgaagacatgcagaggtaagttctccatgatcgaacaaggggagaaaaagaaaagagagaggaagagatattacggtttctgcatagttctttgatgtg  7230300                                                     <---------ICU4                                                     <---------AHL20(1)                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                     --------->YAB1                                                     <--------ATHB1                                                    --------->ICU4       --------->At5g28300                        --------->YAB1      <----------DOF2        --------------------->WRI1--------->ICU4                           <---- -------->KAN4(2)           <---------ARR14(2)   <---------AHL20(2)                        ------->TEIL ------>ICU4                --------->ARR14(2)   --------->AHL20(2)               ---------->DOF2   < -------YAB1             <---------ZAT6    --------->ANAC46                  ---------->DOF2    ----- ----YAB1       <-----------GT1   ------->TEIL  --------->ICU4              <---------ATHB12  <------   attattcgctgtaatttgttacttctagtgtatatgtatttatcgacgtaattaataatttttagtcacaaaaatccaataaagaaaagtttgaacgttt  7230400                                                                                         ----------->GT1             <---------AHL20(2)                                                        --------->DAG2             <---------YAB1                                                           ---------->DOF2 <---------ANAC46                                                                  <---------HSFB2a(2) <---------HSFB2a(2)    <---------ANAC58                                           --------->HSFB2a(2) -----MYB46(3)          <---------ANAC58                                          ----------------->AGL1 ---------LBD16    <----------DOF2                                         <-----------ARR10 ---->MYB52(2)  <---------YAB1                                   <---------YAB1  <-----------------AGL1 ---MYB52(1)<---------AHL20(1) <-----------GT1       <---------CCA1(2)     <---------ARR11(3)   <----   gtttcggaaactaatattattcttttccttgtttaactaaatgactacgttctccaaatctctgagtataaatgcagtatctcttccaaaaaggaaatac  7230500                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                            --------->AHL20(2)              --------->CCA1(2)                                      <-----------GT1                      --------->AGP1                --------->ANAC55(2)--------->YAB1                          --------->ARR11(3)               <---------TOE2(3)   <---------ICU4                  <---------WOX13(1)              <---------DOF5.7(2) <---------YAB1             =======================HOX2a_HOX2a            --------->DOF5.7(2) --------->YAB1               ------>ZmHOX2a(1)            ----------------------->TaNAC69(2)               ======================HOX2a_HOX2a     <- ------ID1 --------->TOE2(3) --------->WOX13(1)      <---------GLK1(2)     <---------ARR11(3)<-------   tacaaaccgaaaacgtttacgttttgtaagtcattcattataacattttaaaacaaattcttcctattgactgatgagatctaatctacatttttaagtt  7230600            <---------ARR11(3)            --------->ARR11(3)         --------->YAB1        <---------YAB1       --------->AHL20(2)       --------->AHL20(1)       <---------AHL20(2)                                                                         <--      --------->YAB1                                                                             <---     <---------YAB1                                      ------->TEIL            <---------AHL20(2) ----------GT1                               --------->YAB1      --------->WOX13(1)        ---------- --TOE2(3) --------->CCA1(1)         <---------ICU4     <---------CCA1(2) <------ZmHOX2a(1)<---------TOE2(3)   ttaactcattataatatctattctatttttgaatttcaaacatttcttcataatacatgtatctcatcagtcaataggaagaatttatagattaagttat  7230700  Previous    Next  AGI:  At1g20800.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G20795.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) Range:  from: 7228707    to: 7230229    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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