Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->LBD16                                                                                           ----------                                                                                          -----------                                                                                ------->MYC3                                                                               --------->ANAC46                                                                      --------->ANAC58    <----------                                                                      --------->ANAC58    ===========                --------->GLK1(1)                                --------->LBD16<-------MYC3---------                --------->CCA1(2)                               ------->GAMYB  --------->O2----------               <---------ARR14(2)                              --------->MYB46(3)      --------->ARR14(2)               --------->ARR14(2)                             <---------At5g28300   <---------ANAC58         --------->ZAT2                                       -------->P  --------->ARR14(2)=========      <---------ZAT2                                   ------>ZmHOX2a(2)  <---------ARR14(2)<--------      <---------At4g35610        ------->TEIL        <---------AGP1  ------->TEIL   <---------ANAC58   aaacctctagctgctcggatatgaaaacgattttgaatctctgagtggctcgatcgatctgatcaaccgcgaacccaatccacgtttcgtttccccatat  7221900                                                            ----------->GT1                      <----------DOF2                  <---------YAB1    --------->ANAC58                 --------->HSFC1(2)                  <---------------AGL15                 --------->HSFB2a(1)                 --------------->AGL15          --------->ARR14(2)                        ----------------->AGL1          <---------ARR14(2)                        <-----------------AGL1            --------->ARR14(2)         <------ZmHOX2a(1)                          ----------------->AGL2          --------->ANAC58 ------->AGL3    <---------HSFC1(2)                 <-----------------AGL2    --------->LBD16 ---->AGL15 <---------LBD16                         <-----------------AGL3   --------->RAP2.6(2) -----AGL15--------->MYB52(1)                       ----------------->AGL3  <---------LBD16 ====================================================================MADS_MADS<------NtERF2 ------>AGL15   <---------ARR14(2)               --------->ARR14(2)      --------->ANAC58 ------->AGL2   --------->ARR14(2)              <------ZmHOX2a(1)    <------ZmHOX2a(1)<---------ARR14(2) =====================================================================MADS_MADS<------NtERF2 -------AGL15 --------->LBD16   <------ZmHOX2a(1)<---------ARR14(2) <----------ID1  --------->ANAC58   agagtaatgcaggaaccggaacttctttgtgagaggattagcgacgcagaggataccattaatggataataggacaaggccggaacaagaaccgagaata  7222000                                                                                        --------->CCA1(2)                                                                                       <---------ARR11(3)                                                                                       <---------ARR14(2)                      --------->ICU4                                                   --------->ARR14(2)      --------->ARR11(3)                         --------->MYB52(1)             <----------DOF2      <---------ARR11(3)            --------->TOE1(2)            <------ZmHOX2a(1)     --------->ARR11(3)   ttacacaagttcttcaagggtgtcatgtttttgaataacctagaaatggcataagggtagaaacagaggaatttagagccaactttggagatatgaagca  7222100                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                   --------->CCA1(2)                                                  --------->ARR14(2)                ---------->DOF2                   <---------ARR14(2)                        ---------            --------->LBD16                      <---------GLK1(1)                  --------->HSFB2a(1)            <---------HSFB2a(2)                  --------->GLK1(1)                  <----------TaMYB80            --------->HSFB2a(2)             <------NtERF2--------->ALFIN1    XXXXXXXXXXXXXXXXXXXX>MIR408          ------>ZmHOX2a(2)               <---------DEAR3(1)   <---------WOX13(1)  <-----------ARR10         <------ZmHOX2a(2)                <---------MYB46(3)<---------YAB1   <---------AtLEC2    ----        <---------ARR14(2)    <---------AHL20(2)<---------ARR14(2)   <---------AHL20(2)   <---------LBD16        --------->ARR14(2)   --------->AHL20(2) --------->ARR14(2)  --------->AHL20(2)    --------->LBD16   aactggacccgatccgagaaaagtattcgaatttaaaatttgggtcgtcggatatatgcgtgttgatagatttatttgtgcatcgcatcttccccagaga  7222200                                  --------->AtLEC2                                --------->GLK1(1)                                --------->At4g35610                   <-----------ARR10   <---------TOE2(3)                   <---------TOE1(3)     ================================HOX2a_HOX2a                      <---------ARR14(2)     ------>ZmHOX2a(2)        =====================================HOX2a_HOX2a    =================================HOX2a_HOX2a                      --------->ARR14(2)    <------ZmHOX2a(2)         <------ZmHOX2a(1)                      <------ZmHOX2a(1)   <---------ARR11(3)      --------->HSFB2a(2)              ------>ZmHOX2a(2)                       <   --------->ARR11(3)      <---------HSFB2a(2)              ================HOX2a_HOX2a   <---------YAB1 >LBD16            --------->GLK1(2) ---------->DOF2      <-----------ARR10<---------TOE2(3)    ----- ----->CCA1(2)    <---------GLK1(2)<-------TEIL           <---------ARR11(3)            <---------AHL20(2)   tttgggatctaagttgaagagaatctcatcgaggagatgcaaaggtaatctcttcatgctgatctcagtgaggatttagggtttatgtttttatttttgt  7222300                      <---------YAB1                                                              <--               <---------TOE2(3)                                                                -----           <-------GAMYB                                                                        <----       ------>ZmHOX2a(2)                                   --------->ARR11(3)                   <----      <---------At4g35610                                  <---------ARR11(3)                   -----      <---------GLK1(1)                            <---------ANAC46                            <-----     --------->ARR11(3)                      <---------ARR14(2)     <---------RVE1(1)          ------     --------->ARR14(2)                      <---------GLK1(2)     --------->ARR14(2)        <-------     <---------ARR14(2)                      <---------ARR11(3)    <---------ARR14(2)        --------     <---------AGP1  <---------TOE2(3)       --------->ARR14(2)    <---------ARR11(3)       --------- ----------DOF2<---------TOE1(3)       <-----------GT1  <-----------GT1                     --------- ----->ID1<---------ANAC46      <------ZmHOX2a(2) ---------->ID1   <---------GLK1(2)    <-----------GT1   tcctttggatctgcgttgaggtttatgttaagcgatctatttgaccagatttttcgtttaacatctccagatttttagttactcccaaattatccccatt  7222400        --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(1)       --------->AHL20(2)                                                                         --- -------YAB1                                                                                      <-- ---->ATHB51                                                                                      <-- ----HAHB4                                                                                       ---- -----ICU4                                     ----------->GT1                     --------->ARR11(3) ---->ATHB12                                  --------->DAG2                       <---------ARR11(3) ----YAB1  <---------WOX13(1)                 <---------TOE1(3)            --------->YAB1        <--- --->ICU4 <------------CBF      <---------AHL20(2)                       <---------TOE2(3)       ---- --------AGL15            <---------MYB52(1)  <---------TOE2(3)        <---------WRKY12     --------- ------->AGL15          <---------ANAC46    --------->CCA1(2)         --------->WRKY18(1)  <--------- -------->AGL2         ---------->ID1    <----------ARF1            --------->ANAC46 --------->AHL20(2) -------->AGL3     <----------DOF2 <----------DOF2 --------->WOX13(1)<-----------HVH21<---------AHL20(2)   attagaaaaattaattgacttctttttcgtttattttctttgggagataaggttaatcagtttaaaatacaggtcaaggataaaagatttatttcacaat  7222500    <------MYB46(1)    <------MYB83   --------->MYB59 ------>AHL20(2) -------AHL20(2) -------YAB1 ----->AHL20(2)                                     --------->ANAC46                                < ------AHL20(1)                                   --------->ANAC46                          --------- ----->AHL20(1)                                   --------->ZAT6        ----------->GT1     --------- --->CBF    ----------->GT1              <------------CBF ----------->RAV1(1)               <-------- --GT1 <-------TEIL   <-------TEIL<-------TEIL  <---------ALFIN1      ---------->DOF2      <---------GLK1(2)   ataatttggttcatgggtaatacatacagagcaaaattcataccattgctccacactaaacaacacaaaaaccaaagttaaaaactttcaacaaaatctc  7222600                                     --------->TOE2(3)                                   --------->GLK1(2)                               ------>MYB46(1)                             <---------MYB111(1)                             <---------MYB59                            --------->ANAC55(2)                          --------->GLK1(1)  --------->WOX13(1)     <---------ARR14(2)                       <-----------GT1 <---------ICU4          --------->ARR14(2)                     --------->AHL20(2) ---------ATHB12        <---------At4g35610               --------->TOE2(3)                     <---- >ARR11(3)    --------->ANAC46 ------>MYB83            --------->GLK1(1)                       <----- >GLK1(2)<---------ICU4 --------->At4g35610            <---------GLK1(1)           --------->ANAC58 -ARR11(3)  <-----------GT1 <---------ANAC55(2)    --------->ANAC46 <----------ID1 --------->ANAC58   taatcaatccaaaattacacaacttcagatacctaataatctaaaaccaatacacagaaatctcaatttaacaacaaaattgcaaacccaattcttcaaa  7222700                                                                                     ----------->HVH21                                                                                  <---------AtLEC2                                                                                 --------->ZAT18                      --------->ANAC46                                           <-------TEIL                    <-----------GT1                                            <-------MYC3            ------>MYB46(1)                                                    ------->MYC4          --------->AtMYB61<------ZmHOX2a(2)                         --------->GLK1(1)      --------->MYB46(3)  <---------ARR11(3)          --------->ARR11(3)       <-------MYC2 -------ARR10  ----------->GT1            ---------->DOF2   <---------YAB1     ------->MYC2 ----CCA1(2)------>MYB83  --------->ARR14(2)          <---------ARR11(3)       ------->MYC3    ------   tctcatcaaacaccaaatcgtttaacgcgatctacaaaatcgattaaagccaaaacgatattctaatacagaaatctaacatgtgcattgacagtgatcg  7222800  Previous    Next  AGI:  At1g20790.1    Description:  F-box family protein. Identical to Putative F-box/Kelch-repeat protein At1g20790 [Arabidopsis Thaliana] (GB:Q9LM75); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G20795.1); similar to F-box protein interaction domain containing protein [Solanum demissum] (GB:AAU90336.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7220950    to: 7222257    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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