Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->At4g35610                                      <---------At4g35610                                      <---------ZAT2                                      --------->ZAT2                               <---------ICU4                                     --------->DAG2                           <---------AHL20(2)                                    ---------->DOF2                        ----------->GT1                                  <<<<<<<<<GATA-3                    ------>MYB83---------->DOF2                          <<<<<<<<<GATA-4                    ------>MYB46(1)   <------NtERF2                      <<<<<<<<<GATA-1                  --------------->AGL15                                  <<<<<<<<<GATA-2                  <---------MYB59<---------TOE2(3)   --------->YAB1     ------->TEIL                  <---------------AGL15   <---------GLK1(2)          <---------YAB1                 ----------------->AG----------->RAV1(1)           --------->CCA1(2)         <------- --->YAB1        ----------------->AGL1 <---------ZAT18 --------->YAB1  --------->ARR14(2)  ------>ZmHOX2a(1)   taacacatttcagttccataccaaataagttaattaaggcagcagactctcactctcatcatatcagtgatatgaatccacaaaaaagtttctcctcatg  7216300                                          <----------DOF2                            --------->ANAC58                                  --------->ANAC46                                   --------->ANAC58                                  --------->ANAC58       <-------TEIL          <---------ARR11(3)                                  --------->ANAC58     <---------ARR14(2)      --------->ARR11(3)                    ------->GAMYB --------->ANAC55(1)  --------->ARR14(2)     --------->RVE1(1) <---------YAB1  --------->MYB52(1)       ------>ZmHOX2a(1)                 <---------GLK1(2) --ICU4    <---------ARR11(3)   <---------ALFIN1     <---------TOE1(2)   --------->ANAC46       -----   gctactatagctagataatcaacgaaaacgtttcccacgcaatcctttttaatcccagattcaattcaattcaacacagaatatctcaagtcatctatac  7216400                                                     <---------YAB1                                                    --------->ARR11(3)                                    --------->At4g35610                                   --------->ARR14(2)                          <------ZmHOX2a(2)         <---------ARR11(3)                    --------->GLK1(2)                         <---------ARR11(3)        --------->YAB1                     --------->ANAC46                         <---------ARR14(2)      ------>MYB46(1)          <---------HSFC1(2)        -           --------->GLK1(2)        <---------At4g35610                   --------->HSFC1(2)        -          --------->YAB1 --------->ARR14(2)      ------>MYB83        --------->HSFB2a(2)  <---------ARR14(2)     --------->TOE1(2)   --------->ARR11(3)   --------->ANAC46       <---------HSFB2a(2) <---------GLK1(2) ---->ANAC46 <---------ICU4------>ZmHOX2a(2)--------->ANAC46   <-----------GT1      <-----------GT1--   atcagaacataagaatcattcccataagatcccattttagctcaatacaccaaatatcattccaattacctctcgaagcttagaattcacagaatccata  7216500                    ------->TEIL                    --------->GLK1(2)                    <---------ARR14(2)                    --------->ARR14(2)                   <---------ARR14(1)                           --------->ZAT2             <---------MYB55(2)                                 <---------ZAT2             --------->MYB46(3)                                 <---------At4g35610            --------->AtLEC2                            <---------DAG2       <-----------GT1                                  <----------DOF2      --------->RVE1(1)<---------HSFB2a(2)             <---------DAG2      --------->CCA1(1)--------->HSFB2a(2)          <---------ALFIN1              <---------GLK1(2) -------->TOE2(3)--------->MYB46(3)               ------>ZmHOX2a(1)             <---------YAB1 ---------->GT1  <---------ATHB12                <---------ALFIN1         <-----------GT1        ---- --------->GT1 --------->MYB52(1)            <---------At4g35610--------->At4g35610   <----------DOF2   agcgttaaatatccatccaacgaatctagaaactgcaaaacattctcatctcctcccccttttcccagctcagttttcacttctgattctttattcacat  7216600                             ------>NtERF2                             --------->LBD16                            --------->ANAC46          --------->ANAC58                       <-----------ARR10              --------->ANAC58                      <---------CCA1(2)               --------->ANAC46              <------ZmHOX2a(1)             ------>ZmHOX2a(1) --------->DEAR3(1)  ------->GAMYB         --------->At4g35610        <---------At4g35610<---------LBD16        <---------ALFIN1       --------->HSFC1(2)     <-------TEIL --------->TOE1(1)        <---------At4g35610           <---------HSFC1(2)     ----- <---------ATHB12XXXXXXXXXXXXXXXXXXXX>MIR780.2  ----------->RAV1(1)      <---------At4g35610   ------ ----->MYB46(3)  ------>ZmHOX2a(1)         --------->At4g35610  --------->MYB46(3)  =================   ccactgattcatctccttcctcgtaaatctccgccatcgaaatttagctccaacacacgcgaatcaacaaatcgaagcttacacgaggaagacaacgtaa  7216700                                                          --------->WOX13(1)  <------ZmHOX2a(2)           *TSS                      ------------>CBF ---->DAG2        <------ZmHOX2a(2)                 --------->ICU4        ---------->DOF2           < ---->DOF2      --------->At4g35610            --------->ANAC55(2)     ------------>CBF           --- ========HOX2a_HOX2a      --------->HSFB2a(2)  --------->YAB1    ---------->DOF2                 ----   agcgatcgaaacagagacagatcaatttctcgagtaaacgaggctattttcgtaatatttcaattagtaaaggcccaatagcccaagtagaagacaacgt  7216800                                                      ---------->DOF2                                                  --------->AHL20(2)           ---------->DOF2                        <---------AHL20(2)                                <    <------ZmHOX2a(2)                            <---------ATHB12--------->YAB1                     < ---------------------WRI1                       --------->AHL20(2)                                 < ------>DAG2                         --------->YAB1   <---------ICU4    ---------->DOF2          <--- ------>DOF2        <------ZmHOX2a(2)--------->ANAC55(2)        <---------ICU4               <-------   aaagcgatcgaaacaaagacggatcaaacgaggctattttcgtaatatccaattaataaaggcccattaataccaatagcccaagtcgaaagattacctc  7216900                                <------MYB83                                <------MYB46(1)                               --------->MYB55(2)                            <---------ANAC46                                                        -                            <---------ANAC58                                                        -                            <---------ANAC58                                                        -                            <------MYB83                                                            -                            <------MYB46(1)                                                         <                            --------->ALFIN1                                                        <                           --------->MYB111(1)                                                      -                           <---------MYB46(3)                                                      <-                           --------->MYB55(2)                                                     <--                           <---------AtMYB61                                                      ===             <---------ARR14(2)<---------MYB46(3)                                                 <--    --------->WRKY18(1)    <---------DEAR3(1)                                                     ===   <-----------HVH21       --------->MYB46(2)               --------->ANAC46                      --- ---------ANAC58           --------->MYB111(2)    <---------ANAC58                              <---- ---------ANAC46          --------->ALFIN1      --------->ALFIN1------>NtERF2                   <---- ---------ANAC58<---------YAB1--------->ALFIN1<---------ANAC46--------->At4g35610  <---------MYB52(1) -------DOF2 --------->ARR14(2)--------->MYB111(1)--------->ALFIN1       <---------MYB52(1)     <---- ----------AG<---------MYB52(1)--------->MYB111(2)<---------ANAC58<-----------RAV1(2)          <-----   tttcgggtcaaaccggttatgtttatgggtgggtgggtagagcaagtcgagtgtgtgtgaacacagcgccaggctgtttgtctcagtttgtcaagttggc  7217000           --------->O2           ==========================================bZIP_DOF           --------->ANAC46           <---------O2           --------->bZIP60(2)           <---------TGA1a           --------->ANAC58           --------->TGA1a      <---------TCP16(1)      <---------TCP20     <------NtERF2     --------->ATERF1(1)    <---------MYB46(3)    <---------ATERF1(1) <---------ANAC58 <---------ANAC58 <------MYB46(1) <------MYB83 -------->MYB46(2) -------->MYB111(2) -------->MYB55(2) -------->MYB52(2) ---------MYB46(3) ---------AtMYB61                                                    <----------DOF2 -------->MYB111(1)                       <---------DAG2            <---------ANAC58 --------MYB55(1)                         <----------DOF2           <---------ANAC58 -------MYB52(1)                    --------->ANAC55(2)         <---------ANAC58 =============================================MYC_MYB           <---------ANAC58 -----GAMYB--------->ANAC58         ====================================bZIP_DOF ====================MYC_MYB        --------->O2                <---------ANAC46 -------------------->TaNAC69(2)    <---------O2            <---------DAG2 -----ANAC58                        <---------TGA1a     <---------WRKY38(1) -----ANAC58                        ============================================bZIP_DOF -----ANAC46                        =================bZIP_DOF<----------DOF2 -NtERF2 <---------ALFIN1           --------->TGA1a    --------->WRKY18(1)   gtttggtggctccacgtctctctctatctctctctctcacatgacttttcgattttagtcaacctttcgtgcttttctcttaaaaattcgattttttctt  7217100                                                                                                   --                                                                                                   <-                                                                                                  ---                                 <-----------GT1                                                  ---                              <----------DOF2            ------->PIF5             <---------ARR11(3)                              <---------DAG2       <---------HSFB2a(2)            --------->ARR11(3)                    <-----------GT1    <---------CCA1(2) <-------PIF5      --------->ZAT2   =========                 *TSS   ------>ZmHOX2a(1)          --------->HSFB2a(2)     <---------ZAT2   <------ZmHOX2a(1)                <---------MYB52(1) ----------->RAV1(2) <---------LBD16     --------->At4g35610 <-----   caacccatcttcttctctgttatttcctctcgcttttacctgtctctctcgttctcgcacggggatagaatcaactctgctcgagattttagtaggaggc  7217200  Previous    Next  AGI:  At1g20770.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN80128.1) Range:  from: 7215004    to: 7216730    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20780.1    Description:  armadillo/beta-catenin repeat protein-related / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76390.1); similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76390.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP50990.1); similar to armadillo/beta-catenin repeat family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97086.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66256.1); contains Inter Range:  from: 7217117    to: 7220773    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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