Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ALFIN1                                                         ----------->HVH21                                                      <---------RAP2.6(3)             --------->ARR14(2)          <---------CCA1(2)                       --------->ANAC46           <---------HSFB2a(2) <-----------GT1                  xxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->ANAC58 -----------GT1              <------ZmHOX2a(2)    --------->ANAC58     --------->ANAC58 ---->AHL20(2)   <-----------RAV1(2)     <---------GLK1(2)  ------->TEIL     --------->HSFB2a(2)  --- -->TOE2(3)------->TEIL   ------>ZmHOX2a(2)       --------->ANAC58 ------>NtERF2      <---------ARR14(2)   atttatctctctgtatctctcaggctgatcgatccttgggacagaaacttgcaagccgtctgaacgtgaggccaagcatctagaggccaatctccatata  7146200                                                  <-------GAMYB                                                 ----------->GT1                      --------->WOX13(1)         <---------MYB46(3)                <-------TEIL                  <------MYB83             ----------->GT1                  <------MYB46(1)                     <---------MYB46(3)             <---------ANAC46              <---------ANAC58         --------->ARR11(3)              <            --------------->AtSPL3         <---------ANAC58     ---------->DOF2<-----------RAV1(1) --            --------------->AtSPL8    --------->YAB1       --------->LBD16    ------->MYC3<---------ANAC58            <---------------AtSPL8 --------->WOX13(1)      <-----------HVH21  <-------MYC3<---------ANAC46 ------>At4g35610   <---------ATHB12 <---------YAB1  ---------->DOF2<---------ARR11(3)    <---------ANAC58   agctcagtctatgtgaggtacaatcaatctcatcgatctatcatcgcttggtcgttaaatccgtcaaaaagataatcacatgtgttgttgtttcttgtct  7146300           <---------ANAC58           <---------ANAC58           <---------ANAC46         <---------YAB1       -------->HAHB4       --------->YAB1                                                                          ------       <---------ICU4                                                                        --------      --------->ICU4                                                                         <-------    <---------ICU4                                                                          <--------    --------->YAB1                                                                 <---------ATHB12   <---------YAB1                                                                --------->WOX13(1)   --------->ICU4                                                               --------->AHL20(2) --------->YAB1                                                                 <---------AHL20(2)  - ---------AHL20(2)                        <----------DOF2             <----------DOF2       <-------- ------->AHL20(2)                 <-----------GT1          <----------DOF2<-----------GT1   <--------   atataataataatgcttgtaatcccaaaaactcatgtttccttcctttctactctcactgtctttgtaatctctttttacaataaatcaatgtttcttga  7146400                                                    <------ZmHOX2a(1)   --------->At5g28300                                                   --------->LBD16     <---------ANAC55(2)   --------->ZAT14            <-------GAMYB  <---------AHL20(2)        --------->TOE2(3) ---->DOF2                   <---------MYB46(3)  <---------LBD16       --------->ANAC55(2)       ==== ------->AGL15            <---------MYB46(3)--------->AHL20(2)     <---------ARR14(2)            <--- --------AGL15           <---------AtMYB61  <---------AHL20(2)     --------->ARR11(3)          <----- -ANAC58              <-----------RAV1(1)  <---------YAB1          <---------ARR11(3)          <----- ---------->GT1  --------->ARR11(3)     <---------YAB1             --------->ARR14(2)       <-------- -ANAC58         <---------ARR11(3)     <---------AHL20(2)       ----------->ARR10        <---------YAB1 -ANAC46       <---------TOE2(3)        --------->AHL20(2)---------->DOF2                <---------AHL20(2)   agcagtaaacaatttctaagatttatggtggtcgttatacatattattaattcaggaaaaaaaagagaagataccgtaattgaacatgtattattttaag  7146500                                         --------->ARR11(3)                                         <---------ARR14(2)                              <---------ICU4                              -------->HAHB4                              --------->YAB1                                  --------->ICU4     ================HOX2a_HOX2a         --------->GLK1(2)               --------->ANAC58     --------->LBD16         --------->ICU4                              --------->ANAC46     ------>ZmHOX2a(1)       <---------ATHB51                            <---------ANAC55(2) --------->GLK1(2)        --------------->AGL15                          --------->ANAC55(2) <---------ARR14(2)       <---------------AGL15                          --------->ANAC55(1) --------->ARR14(2)      <-----------------AGL3                          --------->ANAC58 ====================HOX2a_HOX2a<---------YAB1                         <---------ALFIN1 ---ZmHOX2a(1)           <-----------------AGL1                <---------ARR11(3)                   < ----TOE1(3)             <-----------------AGL2       ---------->DOF2<---------ALFIN1           <---- ----TOE2(3)      --------->MYB46(3)     --------->ARR14(2) ----------------------->TaNAC69(2)  <---- -AHL20(2)    <------ZmHOX2a(2) <---------TOE2(3)xxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------YAB1   gagaatcctgaaatggatcaacaattgtctaattatggtatagtatctggcgaaatcaaagacgatatcatccacacgtaattagtttgactattaatac  7146600                                                <---------AtMYB61    <---------CCA1(1)                                         <---------ANAC58            <---------RVE1(1)                  <------ZmHOX2a(1)      --------->ANAC55(2)        <---------AHL20(1)      --------->ATHB12    *TSS           <---------ANAC58           --------->ARR11(3)     <---------YAB1      ---------->DOF2 <---------ANAC46--------->At4g35610 ------ZmHOX2a(1)--------->ICU4          <---------ANAC55(1)        <---------ARR11(3) -----TOE1(1)   <---------TOE2(3)        <---------ANAC55(2)  --------->YAB1                 -------- -----TOE2(1)   <---------TOE1(3)       <-------TEIL     <---------At4g35610           --------->YAB1   gaggattatcatttggataaggattaacaaagacaaaacacatacgtgttttggtgttgagctaaaataagatattttggctctcgctataaaaaaaaaa  7146700                                --------->CCA1(2)                 --------->ANAC46                 --------->ANAC58   --------->ANAC46                 --------->ANAC58<-------TEIL        --------->ZAT14        --------->ARR14(2)        <---------ZAT18    <---------ANAC58                                                 ---------        <---------ZAT14    <---------ANAC58                                                 ---------   <---------ZAT14    --------->ARR14(2)                                                    ---------  ----------->RAV1(1) <---------ARR14(2)       --------->TOE2(3)----------->GT1 <---------YAB1 ->AHL20(2)    <---------ALFIN1<---------ARR14(2)          ---------->DOF2   <------ZmHOX2a(2)-------   tcgacaacagtgcagacacacgccgatttgcgagatacacacagtctcacctaaaaatcgcaaaagaagaaaaattcggatcaaaattgtcttcaagcat  7146800                                                                                <---------ANAC46    <-------TEIL                                                              <---------ANAC58    ------>ZmHOX2a(2)                                              <---------ANAC58     <---------ANAC55(1)    ----------------->AGL1                                         <---------ANAC58     <---------ANAC46   <------ZmHOX2a(2)                                               --------->ANAC55(2)  <---------ANAC58  <---------ARR14(2)                                               <---------ANAC55(2)  <---------ANAC58  ------->TEIL           <---------GLK1(2)                 <---------ANAC58   <------MYB83  --------->ARR14(2)  <---------WOX13(1)                   <---------ANAC58   <---------ANAC58 >ANAC58            --------->ATHB12                       --------->ANAC55(2)<---------ANAC46 >ANAC58       <-------TEIL                            --------->TOE2(3)      <------MYB46(1) >ANAC46   --------->ANAC46    <----------DOF2         <---------MYB59       <---------AtMYB61      - -->YAB1   <---------------AtSPL8                   <-----------GT1<---------ANAC46    <-------------   catggatccatacagggtacatcgattgattctctttttttgtaatctgtgattttaccttacttgatttcgtatcgatttggtgtgatttcgtgttgaa  7146900                                                       <---------MYB46(3)              <---------ARR11(3)                      <---------WOX13(1)                            <              --------->ARR11(3)                    <---------MYB46(3)          <---------ANAC46   --        <---------YAB1      <-------GAMYB        <---------ANAC58           --------------------->WRI1 --------->DOF2 ------>ZmHOX2a(2)                <---------ANAC46    <---------TOE1(3)            <-- ----------TaNAC69(2)      ----------->GT1       <---------ANAC58    <---------TOE2(3)        <------   tccaaagtgtatgaatgatctctctctctcggttaaaatgatgcaaaattggggtgattgttcgacttgttgaggtttttttgtgtgaatcgatttcttt  7147000                                         >>>>>>>>>>>>>>>>>LFY                 <---------WOX13(1)               <---------ANAC58          <<<<<<<<<<<<<<<<<LFY               --------->ATHB12 ---------AHL20(2)         <---------ANAC58                                <---------YAB1 ------->AHL20(2)          <---------ANAC58                          --------->LBD16 -------YAB1   <---------ANAC58<---------ANAC58                     <---------ANAC46 ----DOF2  <---------ARR14(2)  <---------ANAC58----------->GT1   <-----------GT1   <---------AHL20(2)   attatatagtggagattgggtttcgatttgcatgcgttgaagattccactggaaaattcaacatgtttttccgtctattgattgtttatttgtcaacatg  7147100  Previous    Next  AGI:  At1g20620.1    Description:  CAT3 (CATALASE 3); catalase. Identical to Catalase-3 (CAT3) [Arabidopsis Thaliana] (GB:Q42547;GB:Q93VY9;GB:Q9LDS9); similar to CAT1 (CATALASE 1), catalase [Arabidopsis thaliana] (TAIR:AT1G20630.1); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.2); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.1); similar to catalase [Brassica napus] (GB:AAB53101.2); similar to catalase 3 [Raphanus sativus] (GB:AAD30292.1); similar to catalase 2 [Raphanus sativus] (GB:AAD30291.2); contains InterPro domain Catalase, N-terminal; (InterPro:IPR011614); contains InterPro domain Catalase; (InterPro:IPR Range:  from: 7143057    to: 7146530    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g20630.1    Description:  CAT1 (CATALASE 1); catalase. Identical to Catalase-1 (CAT1) [Arabidopsis Thaliana] (GB:Q96528;GB:O22529;GB:Q9LDS9); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.2); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.1); similar to CAT3 (CATALASE 3), catalase [Arabidopsis thaliana] (TAIR:AT1G20620.1); similar to catalase [Raphanus sativus] (GB:AAF71742.1); similar to catalase [Prunus persica] (GB:CAD42908.1); similar to catalase [Brassica juncea] (GB:AAD17934.1); contains InterPro domain Catalase, N-terminal; (InterPro:IPR011614); contains InterPro domain Catalase; (InterPro:IPR00222 Range:  from: 7146626    to: 7149967    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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