Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------AHL20(2)                                    ---------->DOF2 --------->AHL20(2)                              <---------ALFIN1 ------->TOE2(3)                                --------->LBD16 ------YAB1                                    --------->ANAC46 >AHL20(2)                               <---------HSFC1(2) -AHL20(2)                               --------->HSFC1(2)                                         -   tcattaaatctcttctcttgaagaaatcaaatttcaaaatcgaaacatcccccaacttaaaagcaggggttttcaaaattgaaactaaaaaaacagtctt  7137400                            --------->YAB1                            <---------ICU4                         --------->YAB1                    --------->LBD16                    ----------->GT1                 <------ZmHOX2a(2)                 --------->ARR14(1)                --------->ARR11(3)                --------->ARR11(1)                <---------AGP1                                 <---------ARR11(3)                --------->ARR14(2)                         ---------->DOF2                        ---                --------->AGP1 --------->TOE2(3) --------->YAB1--------->ARR11(3)                 ---   --------->YAB1--------->CCA1(2)              <---------ATHB12    <---------CCA1(2)    --------->MYB52(1)  <---------ATHB12------>ZmHOX2a(2)           --------->WOX13(1) <---------MYB59       --------->ARR11(3)  <<<<<<<<<ARR2 <---------ARR14(2)    ---------->DOF2   ----------->RAV1(1)      <---------HSFB2a(2)- -------->WOX13(1)<---------LBD16   <---------ATHB12   <----------ID1  --------->TOE2(3) <---------DOF5.7(2)   gacaatcaaaaccctatagatccggtttaataatctcaatgaaagacccaatcaagaacaacaaagacctaaatctcaaatacccagaagataacgaaaa  7137500                                                    ------>MYB83 --------->ANAC46                                   ------>MYB46(1) --------->ANAC58              <-----------GT1     --------->MYB52(1) --------->ANAC58          <----------DOF2        --------->AtMYB61             --------->AHL20(2) ------>TOE1(2)           <---------DAG2         --------->DEAR3(2)          --------->YAB1 ------>TOE2(2)        <-----------GT1           --------->MYB46(3)         <---------YAB1 -------->LBD16   --------->AHL20(2)       ---------->DOF2        <---------ETT(2)       <---------YAB1   cccacgaattggtttttcaaaaaaatcaccttttcacagtcaattcaaagaaccaacgcgagattaagtcgacccttgatcataaattcttatgaaaccc  7137600                                                                          <----------DOF2                                       ------>ZmHOX2a(2)                 ------>ZmHOX2a(2)                                     <---------ARR14(2)                 <------ZmHOX2a(2)             --------->TOE2(3)       --------->ARR14(2)                 <---------RVE1(1)             --------->TOE1(3)     <---------MYB46(3)                  --------->ARR11(3)        =====================================HOX2a_HOX2a               <---------ARR11(3)          <-        ------>ZmHOX2a(1)        <---------MYB52(1)                    --------->AGP1              --  ------->TEIL                  <-------GAMYB         ---------->DOF2 --------->GLK1(1)           ---  <---------ARR14(2)       <-----------GT1    >>>>>>>>>>WRKY26        <---------GLK1(1)   <---------ATHB12  --------->ARR14(2)   <----------DOF2<------ZmHOX2a(2)        ---------->DOF2----------->GT1 <------   agtgaatctcctaaaccctaatagtcttttatcccgttggatccaagttgatcaaacaaaggagagaaagagagatcttttagtaaaacccaaagattca  7137700 --------->ANAC46                           <---------ALFIN1                        ----------->GT1 --------->ANAC58                   <---------ARR14(2)                      ----------->GT1 --------->ANAC58                   --------->ARR14(2)                    ---------->DOF2 --------ALFIN1                     --------->ARR11(3)                 *TSS------------------------>ANAC81 ----->GAMYB          <---------ANAC58--------->HSFC1(2)               ----------->GT1       -------- ------>MYB46(3)      <---------ANAC58<---------HSFC1(2)       <----------DOF2    ---------->DOF2---- -TEIL  <----------DOF2             <---------ARR11(3)         --------------->AGL15<----------ID1   accacgctctctttctctctaatggcttcggttttgaagatacttcccactctctctctatctctctttataagggtaaagaaaaaaagaaaaaaaaaag  7137800                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             ========                                                                                             <-------                                                                                            ------>NtERF2                                                                                           <---------ALFIN1                                                                                         ------->GAMYB                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                     <---------WRKY38(1)                                                                                     <---------WRKY12                                                                      --------->At4g35610<-----------                                                          --------->RAP2.6(3)       <------ZmHOX2a(2)    <---------WOX13(1)                                    <---------At5g28300    <---------MYB46(3) <   <------------CBF                                      --------->MYB52(1)    <---------MYB52(1)   - <---------YAB1                                          <-----------GT1   <---------At4g35610<------ -->DOF2                                                 <---------DOF5.7(2) <---------MYB46(3)------ ------->GT1                   <---------ZAT14  <----------DOF2       <---------At4g35610============   agtaagattgattttgaagattagaagagcgtctatagtgtattagttttctttaaaattaacggctagttcatctcagccgttggatcaacgccacgtg  7137900    <------ZmHOX2a(2)   <---------ARR14(2)   --------->AGP1   --------->ARR14(2) >MYC3 -PIF5 >MYC2 -MYC2 >MYC4 -MYC4 >PIF5 --TGA1a --ANAC55(2) ->TGA1a --ANAC46 ->ANAC55(2) --O2 ->O2 =================bZIP_DOF                                                                   <------- -ABF1                                                                                       -------- ------PIF3(1)                          <---------CCA1(2)                                   ========= ---------HSFB2a(2)             --------->ICU4                                              <-------- -------->HSFB2a(2)             <---------YAB1                                <---------------------- -MYC3 ---------->DOF2      --------->At5g28300                       <----------DOF2       <-------- --->ALFIN1                ----------->GT1                        <---------GLK1(2)  <----------DOF2 ==MYC_MYB              --------->MYB52(1)                 <---------AHL20(2)<---------AHL20(2)    <-   ttccagatcgaaagttgtcttctattcaacggttataattgtatatcatctatgtatagatttattcaaattctttgatttttttttcttttattctatt  7138000                        <---------YAB1                      <---------------AGL15 --------AGL15       --------->AHL20(2)                     --------->HSFB2a(2) ------->AGL15       <---------AHL20(1)                     <---------HSFB2a(2) ===========================================================================MADS_MADS ---------AGL2       <---------AHL20(2)               <---------ICU4 --ANAC81        <---------AHL20(2)             --------->YAB1 --------->YAB1            ---------->DOF2 ---------AGL3  <---------YAB1  <---------ICU4  --------->AHL20(2)                     <---------AHL20(2) --------LBD16 <---------AHL20(2)  <-----------GT1   <-------TEIL        --------->AHL20(2)     -----   ttggggaagacaactatttttattttatttttgaaaattacaccatgaaataatattcatttctataaaaacaaataaaacacttctatttaaaagaatc  7138100                          --------->ARR11(1)                          <---------GLK1(2)                          <---------ARR14(2)                          --------->ARR14(2)                               --------->GLK1(1)            <---------WRKY18(1)                                         --------->ANAC58            >>>>>>>>>>WRKY40                                            --------->ANAC58      <------            >>>>>>>>>>WRKY18                                        --------->ANAC58          <------            >>>>>>>>>>WRKY62                                        --------->ANAC58          -------           --------->WRKY12 <-------TEIL                            --------->ANAC46 ---------->DOF2           --------->WRKY45--------->ARR14(1)                <----------DOF2      --------->ANAC46           --------->WRKY38(1)       <---------AHL20(2)      <---------------AGL15--------->ANAC58         <----------DOF2----------->ARR10     ----------->GT1--------------->AGL15--------->ANAC58 ---->AHL20(2)  ---------->DOF2     --------->YAB1        <-----------GT1  <---------GLK1(1)---------   aaatatgtctcctttgaccaaagaccaagattcgtttatattaatctcaagttaaatgattttctttttcaagcaagaaatctcacacaaagtttagatt  7138200                     <---------YAB1               --------->AHL20(2)                    --------->AHL20(2)        <----------ID1                                    <xxxx           --------->ATHB12                   ----------->GT1        <---------ARR11(3)      --------           <--------HAHB4                   ---------->DOF2          <---------GLK1(2)       <------- ---GLK1(2)--------->YAB1             ----------->GT1         --------->YAB1                 -------- ---ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->YAB1    --------->ZAT6--------->ARR14(2) -->ARR11(3)--------->TOE2(3)       ---------->DOF2    ---------->DOF2--------->GLK1(2)    <---------ARR14(2) -->ARR10 <---------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->ARR11(3)  ----------->GT1   ttcttcaagtgtatcattagaatattatactacaagggcaaagaaaaaaagaaaaaataaagaataatagagattttgaagactagaagagcggatatat  7138300  Previous    Next  AGI:  At1g20610.1    Description:  CYCB2;3 (CYCLIN B2;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-B2-3 (CYCB2-3) [Arabidopsis Thaliana] (GB:Q9LDM4;GB:A1L4V3); similar to CYCB2,4 (CYCLIN B2,4), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT1G76310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60997.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains I Range:  from: 7134780    to: 7137771    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version