Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58                                                     <---------ANAC58                                                    <---------At4g35610               --------->RAP2.6(2)                 ------->TEIL             --------->At4g35610                <---------REM1(1)          ---------->DOF2                      ------->MYC3 <---------AHL20(2)                            <-------MYC4 ---------AHL20(2)                             <-------MYC2 -------->AHL20(2)                   <---------TOE2(3) --------->At4g35610       ---------->DOF2 --------AHL20(2)          <---------GLK1(2)   <-------MYC3             --------->ZAT6 ------>YAB1--------->ANAC46--------->GLK1(2)  ------->MYC2            <------ZmHOX2a(2)   tattaatttcatataagcagccataaccagaatcgatctaagattagcacatgtagcttctgactattctccgatcactaaatcaaagtttttaaaacac  7128300                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   --------->GLK1(1)                                                                                   --------->At4g35610                                                                                  <---------ARR11(3)                                                                                  --------->ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                         <----------DOF2                         ====================                                <---------ZAT14                                  <------ZmHOX2a(1)                                --------->ZAT14                          --------->ANAC58                               <<<<<<<<<<<<<<<<<LFY                      --------->ANAC58                            --------->ZAT6                     <----------ID1  --------->MYB59  ------->TEIL             <------ZmHOX2a(2)         --------->AtLEC2 <---------ATHB12              -   catgaaactactactatatagtttgagggatcactacattggcctttactagctcatgcacagaaacaacaaatcacgaattaggatctgcaatctacag  7128400                          <---------MYB52(1)                         --------->LBD16                        <---------ANAC55(2)                        --------->ANAC55(2)                        --------->ANAC46                       <-------TEIL                                                       --------->GLK1(2)                     --------->ARR14(2)                                                  <---------GLK1(2)                     <---------ARR14(2)                                                  <---------ARR14(2)                     <---------ARR11(3)                                        --------->ANAC46                     --------->AGP1                                            --------->ANAC55(1)       ----------->GT1<------ZmHOX2a(2)                                        ----------->GT1      ------>ZmHOX2a(2)------>ZmHOX2a(2)                                       --------->ANAC58   --------->ATHB12 <---------GLK1(1)                  <---------ARR14(2)      --------->ANAC58  <---------YAB1    --------->GLK1(1)            <-------TEIL                  --------->ANAC55(2) ============HOX2a_HOX2a----------->GT1     <-----------RAV1(2)    --------->YAB1      <---------YAB1 -------->YAB1    --------->LBD16          <------ZmHOX2a(2)   ---------->DOF2 <---------ANAC55(2)  -   aaacatgatcggaaaatttccgagatccgtaacttgaaattggcgatcaggttcgagtattcagtaaaagaataacaaaaaacgtaattccgattctgaa  7128500                                                     <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46                                                 <---------GLK1(1)                                              --------->LBD16                                            <---------LBD16 --------->GLK1(2)                                     <-------TEIL--------->GLK1(1)                       ---------->DOF2     --------->MYB52(1)             --------->YAB1          ----------->GT1     <---------AHL20(2) <---------At4g35610     <---------YAB1            <-         ------->TEIL--------->AtMYB61     <---------At5g28300 --------->MYB59                   <--- --------->DOF2---------->DOF2--------->AHL20(2)--------->ARR14(2)<--------P                   <-----   atgaaagaatgaacgtgaaaagaccaaaagaaataaatattcatttaccggagatgcttgaaaatcaggtagactatgatagcgatgttgaggcgctcgt  7128600          <---------ICU4          --------->ATHB12          --------->YAB1                                               --------->LBD16      <------ZmHOX2a(1)                                        <---------CCA1(2)     <------MYB46(1)                                         <---------ALFIN1     <------MYB83                                          <------NtERF2                    <--------    --------->MYB59                                       --------->ANAC58                  ---------   <--------P                                             --------->RAP2.6(2)             --------->MYB55(2) <------MYB83                                             --------->ANAC58                --------->ABI4(2) <------MYB46(1)                          <---------AtMYB61------>NtERF2                  <---------MYB46(3) -------P--------->ICU4<---------------AtSPL3             --------->ANAC46               --------->ALFIN1 ------REM1(1) <---------YAB1           <----------DOF2  --------->SPL7------>NtERF2--------->MYB52(1) --GAMYB <---------YAB1--------------->AtSPL8          <---------SPL7<---------LBD16<---------DOF5.7(2)   tgtaggtaggaatgattatgctatacttgtacttcttctctcctttggtctccatctcgtccgccatctcttccggcgagttttggtaacggtggttcct  7128700                      <------NtERF2                      --------->ATERF1(1)                     <---------RAP2.6(3)                     <-----------HVH21              ----------->GT1                                 <                    --------->DEAR3(1)         --------->YAB1                     <-----------------AGL1         --------->LBD16                     --------->AHL20(2)                   <-----------------AGL2         <-----------HVH21                   <---------AHL20(2)          --------->ANAC58           -        ----------->GT1            *TSS  <------ZmHOX2a(1)               --------->ANAC58           -        <---------ANAC55(2)        --------->YAB1 <---------ICU4        --------->DAG2        <------ -ARR14(2)        --------->At4g35610   --------->ICU4                 ---------->DOF2 <------------CBF >ARR14(2)        <---------At4g35610  <---------TOE2(3)        <----------ID1    <-----------------AGL3   tcgtcttaacccgtgaaatcagccgtcgtctgtacaaaaataaggattaaaataatgtcaaatatagggactaaaaagcaagtttctcaaattgggccta  7128800                                      ---------->DOF2                     *TSS                               --------->WOX13(1)                      <---------At4g35610     ------                              <---------AHL20(2)                       ----------->RAV1(2)     ------ ---------AHL20(2)            --------->AHL20(2)    ----------->GT1    --------->At4g35610    ------- -------->AHL20(2)         --------->YAB1  <----------DOF2      --------->WOX13(1)            ------- ---------->TBP  ---------->DOF2     <------ZmHOX2a(1)       <-----------HVH21                ------- ---MYB59     ----------->TBP--------->AHL20(2)---------->DOF2------------>CBF        <----------DOF2   atataaatatgggcctatataaagcccaaaaataaatcaggaaagctttaaaagaggtaaactcgtcaatcgcatctgagtcgctcttctttccttccgc  7128900       <----------DOF2    <-----------GT1 <---------AHL20(2) --->LBD16                                                                                    ------- >NtERF2                                            <---------ANAC46                          <------ -->ANAC58                                    <---------TOE2(3)                           ----------- -->ANAC58               ---------->DOF2      <---------TOE1(3)      --------->At4g35610--------->LBD16 -->ANAC46           <---------ZAT6      --------->WOX13(1)  ---------->DOF2         --------->MYB52(1)   catttttttctttctaggttgcagagttaaaggagaaggttttcaattagggttttgtagagagaaagatgagccgaagtttgggaataccggtgaagct  7129000                             --------->ALFIN1                          <---------DREB2C(2)                          <---------ANAC46           <-----------RAV1(2)   <---------At4g35610                     <---------ZAT6          <------NtERF2   <---------DEAR3(1)      <----------DOF2      <---------ANAC58   --------->O2        ----------->HVH21     --------->DEAR3(1)        <---------ANAC46         <----   --------->ANAC46    ----------->TGA1     <------NtERF2              <---------ANAC58         -----   <---------O2      <---------ANAC58     <---------DEAR3(1)        <---------WOX13(1)          <---- -->HSFC1(2)      <---------CCA1(2) ---------->DOF2               --------->ATHB12          <-------- ---HSFC1(2)  <-----------HVH21  --------->At4g35610             <---------YAB1           <---------- >HVH21------>NtERF2 <---------ANAC58 ---------->DOF2      <------ZmHOX2a(1)   <------ZmHOX2a(1)-----   tcttcacgaggcctcaggtcatatcgtgacggtggagctaaagagcggcgagctttacagaggaagtatgattgagtgtgaggataactggaactgtcag  7129100                                                           <---------AHL20(2)    --------->ARR14(2)                         <------ZmHOX2a(2)    <---------ARR14(2)                        <---------ARR11(3)    <---------ARR11(3)                        --------->ARR11(3)    --------->ARR11(3)                        --------->ARR14(2)   <------ZmHOX2a(1)                          <---------AGP1 -----ZAT2                                    <---------ARR14(2) ---->ZAT2                                    --------->ARR14(3) -----At4g35610   ------>NtERF2<---------At4g35610        --------->AHL20(2) ---HVH21 <---------ANAC46     --------->At4g35610    <-------TEIL                         <---------ANAC58 --AtMYB77<---------ANAC55(2) --------->MYB52(1)------>ZmHOX2a(2)                          <---------ANAC58 ---->At4g35610<---------At5g28300            <---------ARR14(3)                     <---------TOE2(2)   ctcgaggatattacttataccgccaaggtaatcaactgatactctgaagatctcgattcattttatatgagactgttttttgaaccataggtttcgtttc  7129200  Previous    Next  AGI:  At1g20575.1    Description:  dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative. similar to glycosyl transferase family 2 protein [Arabidopsis thaliana] (TAIR:AT2G39630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62025.1); contains InterPro domain Glycosyl transferase, family 2 (InterPro:IPR001173) Range:  from: 7126762    to: 7128735    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20580.1    Description:  small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative. similar to SMD3 (SNRNP CORE PROTEIN SMD3) [Arabidopsis thaliana] (TAIR:AT1G76300.1); similar to unknown [Picea sitchensis] (GB:ABK21888.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920) Range:  from: 7128874    to: 7130632    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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